[med-svn] [htslib] annotated tag 0.2.0-rc5 created (now 3792f66)

[Charles Plessy]

This is an automated email from the git hooks/post-receive script.

plessy pushed a change to annotated tag 0.2.0-rc5
in repository htslib.

        at  3792f66   (tag)
   tagging  626a888b16e06b97a792cfc654bfd9e6a35568d5 (commit)
  replaces  0.2.0-rc4
 tagged by  John Marshall
        on  Mon Nov 25 11:45:45 2013 +0000

- Log -----------------------------------------------------------------
Test release RC5

John Marshall (6):
      Ensure r is clearly always initialised [minor]
      Use $(LDFLAGS) & $(LDLIBS) when linking shared objects
      Use the exact type in malloc(N * sizeof(TYPE*)) etc
      Fix pointer arithmetic [minor]
      Add HTS_NORETURN and annotate fail() as such
      Use the exact type in realloc(N * sizeof(TYPE*))

Petr Danecek (4):
      Merge branch 'develop' into bcftools+calling
      bcf_remove_alleles: Assume diploid genotypes if the ploidy cannot be determined, better to proceed than crash.
      vcf: Update rlen on BCF output, this is important in BCF indexing, rlen is used as it is. Todo: also END should be checked with symbolic alleles
      Merge branch 'bcftools+calling' into develop

-----------------------------------------------------------------------

This annotated tag includes the following new commits:

       new  626a888   Use the exact type in realloc(N * sizeof(TYPE*))

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


-- 
Alioth's /git/debian-med/git-commit-notice on /srv/git.debian.org/git/debian-med/htslib.git