[med-svn] samtools annotated tag 0.1.3 created (now a58ccb4)

[Charles Plessy]

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plessy pushed a change to annotated tag 0.1.3
in repository samtools.

        at  a58ccb4   (tag)
   tagging  713d436989c8343c63b6231346176908382b3d6f (commit)
  replaces  0.1.2-svntag
 tagged by  On behalf of Heng Li
        on  Thu Apr 16 15:26:25 2009 +0100

- Log -----------------------------------------------------------------
Samtools 0.1.3, including missing ChangeLog.old file
that was omitted from the canonical release tarball.

Heng Li (46):
      * samtools-0.1.2-1
      * samtools-0.1.2-3
      fixed a potential memory problem in indexing
      fixed a bug in generating tag AM
      * output max mapping quality in indel line
      * samtools-0.1.2-6
      * samtools-0.1.2-7
      * samtools-0.1.2-7
      * move indel_filter.pl to samtools.pl
      * samtools-0.1.2-9
      * wgsim-0.2.0
      * wgsim: added a note
      * wgsim-0.2.1
      * wgsim-0.2.2
      * wgsim-0.2.3
      * samtools-0.1.2-10
      * samtools-0.1.2-11
      * samtools-0.1.2-12
      * samtools-0.1.2-13
      * samtools-0.1.2-14
      * samtools-0.1.2-15
      added bam_stat.o to Makefile.lite
      * soap2sam.pl-0.1.2
      * samtools-0.1.2-16
      * samtools-0.1.2-17
      rename Makefile.std as Makefile. GNU building systerm is not ready and may take some time...
      * samtools-0.1.2-18
      * samtools-0.1.2-19
      * samtools-0.1.2-20
      make the script robust to the bugs in SOAP-2.1.7
      * samtools-0.1.2-21
      * fixed the problem in the example alignment due to the bug in fixmate
      * samtools-0.1.2-22
      * samtools-0.1.2-23
      * samtools-0.1.2-24
      update ChangeLog from "svn log"
      * samtools-0.1.2-25
      * samtools.pl-0.1.1
      proposed NEWS for the new release (have not yet)
      * samtools-0.1.2-26
      * samtools-0.1.2-27
      convert NCBI-BLASTN to SAM
      prepare for release 0.1.3
      * samtools-0.1.2-28
      Release samtools-0.1.3
      a missing file in Makefile.lite

On behalf of Bob Handsaker (2):
      Pass LIBS to recursive targets to facilitate building at Broad.
      Fix annoying segv when invalid region specified.

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No new revisions were added by this update.

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