[med-svn] [probabel] 01/01: Added patch that should change the location of the extIDS.pl script from /usr/bin to /usr/share/probabel/examples. For some reason it doesn't...

[Lennart Karssen]

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lckarssen-guest pushed a commit to branch master
in repository probabel.

commit 7bb20b889021e166765db85ebf8d1f518bccc2bc
Author: L.C. Karssen <lennart at karssen.org>
Date:   Wed Dec 11 23:18:44 2013 +0100

    Added patch that should change the location of the extIDS.pl script from /usr/bin to /usr/share/probabel/examples. For some reason it doesn't...
---
 debian/patches/fix-extIDS.pl.patch | 22 ++++++++++++++++++++++
 debian/patches/series              |  1 +
 src/Makefile.am                    |  6 +++---
 3 files changed, 26 insertions(+), 3 deletions(-)

diff --git a/debian/patches/fix-extIDS.pl.patch b/debian/patches/fix-extIDS.pl.patch
new file mode 100644
index 0000000..5c270f3
--- /dev/null
+++ b/debian/patches/fix-extIDS.pl.patch
@@ -0,0 +1,22 @@
+Description: Fix Makefile.am to install extIDS.pl in a more correct location
+ This patch will be sent upstream.
+Forwarded: TODO
+Author: Lennart C. Karssen <lennart at karssen.org>
+Last-Update: 2013-12-11
+
++++ b/src/Makefile.am
+@@ -75,11 +75,11 @@
+ extract_snp_SOURCES = extract-snp.cpp $(FVSRC) $(FVHEADERS)
+ 
+ ## Install these scripts in the bin directory as well:
+-dist_bin_SCRIPTS = probabel.pl extIDS.pl
++dist_bin_SCRIPTS = probabel.pl
+ 
+-## Install this R script in the examples directory
++## Install these scripts in the examples directory
+ scriptdir = $(pkgdatadir)/scripts
+-dist_script_DATA = prepare_data.R
++dist_script_DATA = prepare_data.R extIDS.pl
+ 
+ ## Install the config file
+ dist_sysconf_DATA = probabel_config.cfg.example
diff --git a/debian/patches/series b/debian/patches/series
new file mode 100644
index 0000000..97779a8
--- /dev/null
+++ b/debian/patches/series
@@ -0,0 +1 @@
+fix-extIDS.pl.patch
diff --git a/src/Makefile.am b/src/Makefile.am
index c541869..1f8197d 100644
--- a/src/Makefile.am
+++ b/src/Makefile.am
@@ -75,11 +75,11 @@ endif
 extract_snp_SOURCES = extract-snp.cpp $(FVSRC) $(FVHEADERS)
 
 ## Install these scripts in the bin directory as well:
-dist_bin_SCRIPTS = probabel.pl extIDS.pl
+dist_bin_SCRIPTS = probabel.pl
 
-## Install this R script in the examples directory
+## Install these scripts in the examples directory
 scriptdir = $(pkgdatadir)/scripts
-dist_script_DATA = prepare_data.R
+dist_script_DATA = prepare_data.R extIDS.pl
 
 ## Install the config file
 dist_sysconf_DATA = probabel_config.cfg.example

-- 
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