[med-svn] r13100 - in trunk/packages/aragorn/trunk/debian: . man

[Sascha Steinbiss]

Author: sascha-guest
Date: 2013-02-24 16:04:15 +0000 (Sun, 24 Feb 2013)
New Revision: 13100

Modified:
   trunk/packages/aragorn/trunk/debian/man/aragorn.1
   trunk/packages/aragorn/trunk/debian/manpage.1.src
Log:
minor manpage changes


Modified: trunk/packages/aragorn/trunk/debian/man/aragorn.1
===================================================================
--- trunk/packages/aragorn/trunk/debian/man/aragorn.1	2013-02-24 15:52:18 UTC (rev 13099)
+++ trunk/packages/aragorn/trunk/debian/man/aragorn.1	2013-02-24 16:04:15 UTC (rev 13100)
@@ -2,12 +2,12 @@
 .\"     Title: aragorn
 .\"    Author: [see the "AUTHORS" section]
 .\" Generator: DocBook XSL Stylesheets v1.76.1 <http://docbook.sf.net/>
-.\"      Date: 02/23/2013
+.\"      Date: 02/24/2013
 .\"    Manual: \ \&
 .\"    Source: \ \&
 .\"  Language: English
 .\"
-.TH "ARAGORN" "1" "02/23/2013" "\ \&" "\ \&"
+.TH "ARAGORN" "1" "02/24/2013" "\ \&" "\ \&"
 .\" -----------------------------------------------------------------
 .\" * Define some portability stuff
 .\" -----------------------------------------------------------------
@@ -50,7 +50,10 @@
 .PP
 \fB\-mt\fR
 .RS 4
-Search for Metazoan mitochondrial tRNA genes\&. tRNA genes with introns not detected\&. \-i,\-sr switchs ignored\&. Composite Metazoan mitochondrial genetic code used\&.
+Search for Metazoan mitochondrial tRNA genes\&. tRNA genes with introns not detected\&.
+\fB\-i\fR,
+\fB\-sr\fR
+switchs ignored\&. Composite Metazoan mitochondrial genetic code used\&.
 .RE
 .PP
 \fB\-mtmam\fR
@@ -78,7 +81,8 @@
 \fB\-gc\fR[\fInum\fR]
 .RS 4
 Use the GenBank transl_table = [\fInum\fR] genetic code\&. Individual modifications can be appended using
-\fI,BBB\fR=<aa> B = A,C,G, or T\&. <aa> is the three letter code for an amino\-acid\&. More than one modification can be specified\&. eg \-gcvert,aga=Trp,agg=Trp uses the Vertebrate Mitochondrial code and the codons AGA and AGG changed to Tryptophan\&.
+\fI,BBB\fR=<aa> B = A,C,G, or T\&. <aa> is the three letter code for an amino\-acid\&. More than one modification can be specified\&. eg
+\fB\-gcvert\fR,aga=Trp,agg=Trp uses the Vertebrate Mitochondrial code and the codons AGA and AGG changed to Tryptophan\&.
 .RE
 .PP
 \fB\-gcstd\fR

Modified: trunk/packages/aragorn/trunk/debian/manpage.1.src
===================================================================
--- trunk/packages/aragorn/trunk/debian/manpage.1.src	2013-02-24 15:52:18 UTC (rev 13099)
+++ trunk/packages/aragorn/trunk/debian/manpage.1.src	2013-02-24 16:04:15 UTC (rev 13100)
@@ -26,7 +26,7 @@
             is not detected unless specified as well.
 *-mt*::
             Search for Metazoan mitochondrial tRNA genes.
-            tRNA genes with introns not detected. -i,-sr switchs
+            tRNA genes with introns not detected. *-i*, *-sr* switchs
             ignored. Composite Metazoan mitochondrial
             genetic code used.
 
@@ -48,7 +48,7 @@
             Individual modifications can be appended using
             ',BBB'=<aa>     B = A,C,G, or T. <aa> is the three letter
             code for an amino-acid. More than one modification
-            can be specified. eg -gcvert,aga=Trp,agg=Trp uses
+            can be specified. eg *-gcvert*,aga=Trp,agg=Trp uses
             the Vertebrate Mitochondrial code and the codons
             AGA and AGG changed to Tryptophan.