[med-svn] r14129 - in trunk/packages/mcl/trunk/debian: . patches
Philipp Benner
philipp at alioth.debian.org
Tue Jul 9 17:17:03 UTC 2013
Author: philipp
Date: 2013-07-09 17:17:03 +0000 (Tue, 09 Jul 2013)
New Revision: 14129
Added:
trunk/packages/mcl/trunk/debian/patches/05-manual-what-is.patch
Modified:
trunk/packages/mcl/trunk/debian/control
trunk/packages/mcl/trunk/debian/patches/series
trunk/packages/mcl/trunk/debian/rules
Log:
mcl: release 1:12-135-2
Modified: trunk/packages/mcl/trunk/debian/control
===================================================================
--- trunk/packages/mcl/trunk/debian/control 2013-07-09 16:46:31 UTC (rev 14128)
+++ trunk/packages/mcl/trunk/debian/control 2013-07-09 17:17:03 UTC (rev 14129)
@@ -4,7 +4,7 @@
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Philipp Benner <philipp at debian.org>,
Andreas Tille <tille at debian.org>
-Build-Depends: debhelper (>= 7), dpkg-dev (>= 1.16.1~), autotools-dev, quilt, zoem, tidy
+Build-Depends: debhelper (>= 7), dpkg-dev (>= 1.16.1~), autotools-dev, quilt, zoem, tidy, aephea
Standards-Version: 3.9.4
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/mcl/
Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/mcl/
Added: trunk/packages/mcl/trunk/debian/patches/05-manual-what-is.patch
===================================================================
--- trunk/packages/mcl/trunk/debian/patches/05-manual-what-is.patch (rev 0)
+++ trunk/packages/mcl/trunk/debian/patches/05-manual-what-is.patch 2013-07-09 17:17:03 UTC (rev 14129)
@@ -0,0 +1,165 @@
+--- a/doc/clmclose.azm
++++ b/doc/clmclose.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{clm close}{Fetch connected components from graphs or subgraphs}
++\NAME{clm_close}{Fetch connected components from graphs or subgraphs}
+
+ \disclaim_clm{close}
+
+--- a/doc/clmdist.azm
++++ b/doc/clmdist.azm
+@@ -23,7 +23,7 @@
+ \def{sjd}{\bf{sjd}}
+
+ \sec{name}{NAME}
+-\NAME{clm dist}{compute the distance between two or more partitions\
++\NAME{clm_dist}{compute the distance between two or more partitions\
+ (clusterings).}
+
+ \par{
+--- a/doc/clmformat.azm
++++ b/doc/clmformat.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{*}{name}{NAME}
+-\NAME{clm format}{display cluster results in readable form}
++\NAME{clm_format}{display cluster results in readable form}
+
+ \par{
+ (optionally with labels and/or cohesion and stickiness measures
+--- a/doc/clmimac.azm
++++ b/doc/clmimac.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{clm imac}{Interpret Matrices (c.q. MCL iterands output by \mcl)\
++\NAME{clm_imac}{Interpret Matrices (c.q. MCL iterands output by \mcl)\
+ As Clusterings.}
+ \disclaim_clm{imac}
+
+--- a/doc/clminfo.azm
++++ b/doc/clminfo.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{clm info}{compute performance measures for graphs and clusterings.}
++\NAME{clm_info}{compute performance measures for graphs and clusterings.}
+
+ \disclaim_clm{info}
+
+--- a/doc/clmmate.azm
++++ b/doc/clmmate.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{clm mate}{compute best matches between two clusterings}
++\NAME{clm_mate}{compute best matches between two clusterings}
+
+ \disclaim_clm{mate}
+
+--- a/doc/clmmeet.azm
++++ b/doc/clmmeet.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{clm meet}{compute the intersection of a set of clusterings.}
++\NAME{clm_meet}{compute the intersection of a set of clusterings.}
+
+ \disclaim_clm{meet}
+
+--- a/doc/clmorder.azm
++++ b/doc/clmorder.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{clm order}{reorder clusterings conformal to inclusion structure}
++\NAME{clm_order}{reorder clusterings conformal to inclusion structure}
+
+ \disclaim_clm{order}
+
+--- a/doc/clmresidue.azm
++++ b/doc/clmresidue.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{clm residue}{extend clustering of subgraph to clustering of graph.}
++\NAME{clm_residue}{extend clustering of subgraph to clustering of graph.}
+
+ \disclaim_clm{residue}
+
+--- a/doc/clmvol.azm
++++ b/doc/clmvol.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{clm vol}{compute volatile nodes from a set of clusterings}
++\NAME{clm_vol}{compute volatile nodes from a set of clusterings}
+
+ \disclaim_clm{vol}
+
+--- a/doc/mcxclcf.azm
++++ b/doc/mcxclcf.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{mcx clcf}{compute the clustering coefficient of a graph}
++\NAME{mcx_clcf}{compute the clustering coefficient of a graph}
+
+ \sec{synopsis}{SYNOPSIS}
+ \par{
+--- a/doc/mcxconvert.azm
++++ b/doc/mcxconvert.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{mcx convert}{convert between mcx storage types}
++\NAME{mcx_convert}{convert between mcx storage types}
+
+ \sec{synopsis}{SYNOPSIS}
+ \par{
+--- a/doc/mcxctty.azm
++++ b/doc/mcxctty.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{mcx ctty}{compute betweenness centrality for network nodes}
++\NAME{mcx_ctty}{compute betweenness centrality for network nodes}
+
+ \sec{synopsis}{SYNOPSIS}
+ \par{
+--- a/doc/mcxdiameter.azm
++++ b/doc/mcxdiameter.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{mcx diameter}{compute the diameter of a graph}
++\NAME{mcx_diameter}{compute the diameter of a graph}
+
+ \sec{synopsis}{SYNOPSIS}
+ \par{
+--- a/doc/mcxerdos.azm
++++ b/doc/mcxerdos.azm
+@@ -15,7 +15,7 @@
+ \${html}{\"pud::man::maketoc"}
+
+ \sec{name}{NAME}
+-\NAME{mcx erdos}{compute shortest paths in a graph}
++\NAME{mcx_erdos}{compute shortest paths in a graph}
+
+ \sec{synopsis}{SYNOPSIS}
+ \par{
Modified: trunk/packages/mcl/trunk/debian/patches/series
===================================================================
--- trunk/packages/mcl/trunk/debian/patches/series 2013-07-09 16:46:31 UTC (rev 14128)
+++ trunk/packages/mcl/trunk/debian/patches/series 2013-07-09 17:17:03 UTC (rev 14129)
@@ -2,3 +2,4 @@
02-wrong-interpreter-path.patch
03-mayhem-io.patch
04-mayhem-vector.patch
+05-manual-what-is.patch
Modified: trunk/packages/mcl/trunk/debian/rules
===================================================================
--- trunk/packages/mcl/trunk/debian/rules 2013-07-09 16:46:31 UTC (rev 14128)
+++ trunk/packages/mcl/trunk/debian/rules 2013-07-09 17:17:03 UTC (rev 14129)
@@ -165,10 +165,6 @@
binary-indep: build install
dh_installman
- # Fix broken manpages instead
- sed -i -e 's/^\(.TH "[cm][lc][mx]\) \+\(\w\)/\1\2/' \
- -e 's/^\([cm][lc][mx]\) \+\(\w\+ \\-\)/\1\2/' \
- $(CURDIR)/debian/$(pkg)/usr/share/man/man1/[cm]*.1
dh_installchangelogs ChangeLog
dh_compress
dh_fixperms
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