[med-svn] r13823 - trunk/packages/microbiomeutil/trunk/debian

Andreas Tille tille at alioth.debian.org
Tue Jun 4 09:22:59 UTC 2013


Author: tille
Date: 2013-06-04 09:22:59 +0000 (Tue, 04 Jun 2013)
New Revision: 13823

Added:
   trunk/packages/microbiomeutil/trunk/debian/chimeraslayer.install
   trunk/packages/microbiomeutil/trunk/debian/chimeraslayer.links
   trunk/packages/microbiomeutil/trunk/debian/microbiomeutil-data.install
   trunk/packages/microbiomeutil/trunk/debian/nast-ier.install
   trunk/packages/microbiomeutil/trunk/debian/nast-ier.links
   trunk/packages/microbiomeutil/trunk/debian/wigeon.install
   trunk/packages/microbiomeutil/trunk/debian/wigeon.links
Removed:
   trunk/packages/microbiomeutil/trunk/debian/microbiomeutil.dirs
Modified:
   trunk/packages/microbiomeutil/trunk/debian/changelog
   trunk/packages/microbiomeutil/trunk/debian/microbiomeutil.install
   trunk/packages/microbiomeutil/trunk/debian/rules
Log:
Rather use the usual debhelper input files


Modified: trunk/packages/microbiomeutil/trunk/debian/changelog
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/changelog	2013-06-04 08:53:36 UTC (rev 13822)
+++ trunk/packages/microbiomeutil/trunk/debian/changelog	2013-06-04 09:22:59 UTC (rev 13823)
@@ -11,6 +11,8 @@
      - better formatting
   * debian/rules: remove "--with quilt" because this is specified in
     source format
+  * debian/rules, debian/*.install, debian/*.links:
+    Rather use the usual debhelper input files
 
  -- Andreas Tille <tille at debian.org>  Tue, 04 Jun 2013 10:35:17 +0200
 

Added: trunk/packages/microbiomeutil/trunk/debian/chimeraslayer.install
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/chimeraslayer.install	                        (rev 0)
+++ trunk/packages/microbiomeutil/trunk/debian/chimeraslayer.install	2013-06-04 09:22:59 UTC (rev 13823)
@@ -0,0 +1 @@
+ChimeraSlayer	usr/lib

Added: trunk/packages/microbiomeutil/trunk/debian/chimeraslayer.links
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/chimeraslayer.links	                        (rev 0)
+++ trunk/packages/microbiomeutil/trunk/debian/chimeraslayer.links	2013-06-04 09:22:59 UTC (rev 13823)
@@ -0,0 +1 @@
+usr/lib/ChimeraSlayer/ChimeraSlayer.pl	usr/bin/chimeraslayer

Added: trunk/packages/microbiomeutil/trunk/debian/microbiomeutil-data.install
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/microbiomeutil-data.install	                        (rev 0)
+++ trunk/packages/microbiomeutil/trunk/debian/microbiomeutil-data.install	2013-06-04 09:22:59 UTC (rev 13823)
@@ -0,0 +1,4 @@
+RESOURCES			/usr/share/microbiomeutil-data
+ChimeraSlayer/sample_data/*	/usr/share/microbiomeutil-data/ChimeraSlayer
+WigeoN/sample_data/*		/usr/share/microbiomeutil-data/ChimeraSlayer
+NAST-iEr/sample_data/*		/usr/share/microbiomeutil-data/ChimeraSlayer

Deleted: trunk/packages/microbiomeutil/trunk/debian/microbiomeutil.dirs
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/microbiomeutil.dirs	2013-06-04 08:53:36 UTC (rev 13822)
+++ trunk/packages/microbiomeutil/trunk/debian/microbiomeutil.dirs	2013-06-04 09:22:59 UTC (rev 13823)
@@ -1 +0,0 @@
-usr/share/microbiomeutil

Modified: trunk/packages/microbiomeutil/trunk/debian/microbiomeutil.install
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/microbiomeutil.install	2013-06-04 08:53:36 UTC (rev 13822)
+++ trunk/packages/microbiomeutil/trunk/debian/microbiomeutil.install	2013-06-04 09:22:59 UTC (rev 13823)
@@ -1,5 +1 @@
-ChimeraSlayer	usr/share/microbiomeutil/
-NAST-iEr	usr/share/microbiomeutil/
-RESOURCES	usr/share/microbiomeutil/
-WigeoN	usr/share/microbiomeutil/
 debian/ChimeraSlayer	usr/bin/

Added: trunk/packages/microbiomeutil/trunk/debian/nast-ier.install
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/nast-ier.install	                        (rev 0)
+++ trunk/packages/microbiomeutil/trunk/debian/nast-ier.install	2013-06-04 09:22:59 UTC (rev 13823)
@@ -0,0 +1 @@
+NAST-iEr	usr/lib

Added: trunk/packages/microbiomeutil/trunk/debian/nast-ier.links
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/nast-ier.links	                        (rev 0)
+++ trunk/packages/microbiomeutil/trunk/debian/nast-ier.links	2013-06-04 09:22:59 UTC (rev 13823)
@@ -0,0 +1 @@
+usr/lib/NAST-iEr/run_NAST-iEr.pl	usr/bin/nast-ier

Modified: trunk/packages/microbiomeutil/trunk/debian/rules
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/rules	2013-06-04 08:53:36 UTC (rev 13822)
+++ trunk/packages/microbiomeutil/trunk/debian/rules	2013-06-04 09:22:59 UTC (rev 13823)
@@ -11,29 +11,9 @@
 override_dh_auto_test :
 	true
 
-#OK, I can't fathom all the auto-install stuff, and I'm not sure
-#it will work properly for this package in any case.  Doing it manually.
-#Note that NAST-iEr comes with a binary but users are expected to run it via the Perl wrapper.
-export DH_INSTALL=dh_install -XMakefile -Xsample_data -XLICENSE -XNAST-iEr.c
-export DH_LINK=dh_link
-override_dh_install :
-	#Included -v to debug remote build
-	dh_installdirs -v -A /usr/bin
-	$(DH_INSTALL) -pchimeraslayer ChimeraSlayer /usr/lib
-	$(DH_LINK) -pchimeraslayer /usr/lib/ChimeraSlayer/ChimeraSlayer.pl /usr/bin/chimeraslayer
-	dh_install -pchimeraslayer  ChimeraSlayer/LICENSE /usr/share/doc/chimeraslayer
-	$(DH_INSTALL) -pwigeon WigeoN /usr/lib
-	$(DH_LINK) -pwigeon /usr/lib/WigeoN/run_WigeoN.pl /usr/bin/wigeon
-	$(DH_LINK) -pwigeon /usr/lib/WigeoN/run_CM_to_WigeoN.pl /usr/bin/cm_to_wigeon
-	dh_install -pwigeon  WigeoN/LICENSE /usr/share/doc/wigeon
-	$(DH_INSTALL) -pnast-ier NAST-iEr /usr/lib
-	$(DH_LINK) -pnast-ier /usr/lib/NAST-iEr/run_NAST-iEr.pl /usr/bin/nast-ier
-	dh_install -pnast-ier NAST-iEr/LICENSE /usr/share/doc/nast-ier
-	$(DH_INSTALL) -pmicrobiomeutil-data RESOURCES /usr/share/microbiomeutil-data
-	$(DH_INSTALL) -pmicrobiomeutil-data ChimeraSlayer/sample_data/*  /usr/share/microbiomeutil-data/ChimeraSlayer
-	$(DH_INSTALL) -pmicrobiomeutil-data WigeoN/sample_data/*  /usr/share/microbiomeutil-data/ChimeraSlayer
-	$(DH_INSTALL) -pmicrobiomeutil-data NAST-iEr/sample_data/*  /usr/share/microbiomeutil-data/ChimeraSlayer
-	
+override_dh_install:
+	dh_install -XMakefile -Xsample_data -XLICENSE -XNAST-iEr.c
+
 override_dh_fixperms :
 	dh_fixperms
 	find debian -type f -name '*.pm' -print0 | xargs -0r chmod a-x

Added: trunk/packages/microbiomeutil/trunk/debian/wigeon.install
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/wigeon.install	                        (rev 0)
+++ trunk/packages/microbiomeutil/trunk/debian/wigeon.install	2013-06-04 09:22:59 UTC (rev 13823)
@@ -0,0 +1 @@
+WigeoN	usr/lib

Added: trunk/packages/microbiomeutil/trunk/debian/wigeon.links
===================================================================
--- trunk/packages/microbiomeutil/trunk/debian/wigeon.links	                        (rev 0)
+++ trunk/packages/microbiomeutil/trunk/debian/wigeon.links	2013-06-04 09:22:59 UTC (rev 13823)
@@ -0,0 +1,2 @@
+usr/lib/WigeoN/run_WigeoN.pl		usr/bin/wigeon
+usr/lib/WigeoN/run_CM_to_WigeoN.pl	usr/bin/cm_to_wigeon




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