[med-svn] [SCM] bwa branch, master, updated. debian/0.6.1-1-22-g71fd912

[Charles Plessy]

The following commit has been merged in the master branch:
commit c330e89b417681cd118a0368cc4fcb647b9c3e61
Author: Charles Plessy <plessy at debian.org>
Date:   Thu Mar 7 14:38:21 2013 +0900

    Updated list of BWA's commands.

diff --git a/debian/bash_completion/bwa b/debian/bash_completion/bwa
index bc011bf..282dab1 100644
--- a/debian/bash_completion/bwa
+++ b/debian/bash_completion/bwa
@@ -5,10 +5,9 @@ _bwa()
   cur="${COMP_WORDS[COMP_CWORD]}"
   prev="${COMP_WORDS[COMP_CWORD-1]}"
   opts="index aln samse sampe
-        bwasw fa2pac pac2bwt
+        bwasw fastmap mem fa2pac pac2bwt
         pac2bwtgen bwtupdate
-        pac_rev bwt2sa pac2cspac
-        stdsw"
+        bwt2sa"
 
   case $prev in
       bwa)

-- 
Burrows-Wheeler Aligner