[med-svn] [SCM] tophat branch, master, updated. debian/2.0.6-1-13-g5e7226a

[Alexandre Mestiashvili]

The following commit has been merged in the master branch:
commit 5e7226af1e1c1747a5286abc85e5b525468f1f48
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Tue May 7 23:28:58 2013 +0200

     - d/control: use canonical vcs fields, Standards-Version: 3.9.4
     - d/changelog: updated the source field

diff --git a/debian/control b/debian/control
index d3135c5..d6e0546 100644
--- a/debian/control
+++ b/debian/control
@@ -9,10 +9,10 @@ Uploaders: Carlos Borroto <carlos.borroto at gmail.com>,
 Build-Depends: debhelper (>= 9), autotools-dev, libbam-dev (>=0.1.16),
  zlib1g-dev, dh-autoreconf, python (>=2.6.6-3~), seqan-dev (>= 1.3~),
  libboost-thread-dev, help2man
-Standards-Version: 3.9.3
+Standards-Version: 3.9.4
 Homepage: http://tophat.cbcb.umd.edu/
-Vcs-Git: git://git.debian.org/debian-med/tophat.git
-Vcs-Browser: http://git.debian.org/?p=debian-med/tophat.git
+Vcs-Git: git://anonscm.debian.org/debian-med/tophat.git
+Vcs-Browser: http://anonscm.debian.org/gitweb/?p=debian-med/tophat.git
 
 Package: tophat
 Architecture: any
diff --git a/debian/copyright b/debian/copyright
index 1036702..94fa861 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,7 +1,7 @@
 Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: TopHat
 Upstream-Contact: Cole Trapnell <cole at cs.umd.edu>
-Source: http://tophat.cbcb.umd.edu/downloads/tophat-2.0.5.tar.gz
+Source: http://tophat.cbcb.umd.edu/downloads/tophat-2.0.8b.tar.gz
 Comment:
  Cole Trapnell wrote TopHat. TopHat is built on Bowtie, which was written by
  Ben Langmead and Cole Trapnell.  Daehwan Kim and Geo Pertea added support

-- 
A spliced read mapper for RNA-Seq