[med-svn] r15350 - trunk/packages/mafft/trunk/debian/tests

Charles Plessy plessy at moszumanska.debian.org
Sat Nov 30 08:09:33 UTC 2013


Author: plessy
Date: 2013-11-30 08:09:33 +0000 (Sat, 30 Nov 2013)
New Revision: 15350

Modified:
   trunk/packages/mafft/trunk/debian/tests/with-example-data
Log:
Run mafft quietly instead.


Modified: trunk/packages/mafft/trunk/debian/tests/with-example-data
===================================================================
--- trunk/packages/mafft/trunk/debian/tests/with-example-data	2013-11-30 08:05:54 UTC (rev 15349)
+++ trunk/packages/mafft/trunk/debian/tests/with-example-data	2013-11-30 08:09:33 UTC (rev 15350)
@@ -1,13 +1,11 @@
 #!/bin/sh -e
 
-MAFFT="mafft --thread 0"
+MAFFT="mafft --quiet --thread 0"
 TESTDATADIR=/usr/share/doc/mafft/test/
 
-PF=$ADTTMP/progress
-
-$MAFFT --progress $PF                               $TESTDATADIR/sample | diff $TESTDATADIR/sample.fftns2 - || cat $PF >&2
-$MAFFT --progress $PF --maxiterate 100              $TESTDATADIR/sample | diff $TESTDATADIR/sample.fftnsi - || cat $PF >&2
-$MAFFT --progress $PF --globalpair                  $TESTDATADIR/sample | diff $TESTDATADIR/sample.gins1 - || cat $PF >&2
-$MAFFT --progress $PF --globalpair --maxiterate 100 $TESTDATADIR/sample | diff $TESTDATADIR/sample.ginsi - || cat $PF >&2
-$MAFFT --progress $PF --localpair                   $TESTDATADIR/sample | diff $TESTDATADIR/sample.lins1 - || cat $PF >&2
-$MAFFT --progress $PF --localpair --maxiterate 100  $TESTDATADIR/sample | diff $TESTDATADIR/sample.linsi - || cat $PF >&2
+$MAFFT                               $TESTDATADIR/sample | diff $TESTDATADIR/sample.fftns2 -
+$MAFFT --maxiterate 100              $TESTDATADIR/sample | diff $TESTDATADIR/sample.fftnsi -
+$MAFFT --globalpair                  $TESTDATADIR/sample | diff $TESTDATADIR/sample.gins1 -
+$MAFFT --globalpair --maxiterate 100 $TESTDATADIR/sample | diff $TESTDATADIR/sample.ginsi -
+$MAFFT --localpair                   $TESTDATADIR/sample | diff $TESTDATADIR/sample.lins1 -
+$MAFFT --localpair --maxiterate 100  $TESTDATADIR/sample | diff $TESTDATADIR/sample.linsi -




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