[med-svn] r14618 - in trunk/packages/clustalw-mpi/tags: . 0.15-3/debian
Charles Plessy
plessy at alioth.debian.org
Sun Sep 8 01:16:56 UTC 2013
Author: plessy
Date: 2013-09-08 01:16:56 +0000 (Sun, 08 Sep 2013)
New Revision: 14618
Added:
trunk/packages/clustalw-mpi/tags/0.15-3/
trunk/packages/clustalw-mpi/tags/0.15-3/debian/changelog
trunk/packages/clustalw-mpi/tags/0.15-3/debian/clustalw-mpi.1
trunk/packages/clustalw-mpi/tags/0.15-3/debian/compat
trunk/packages/clustalw-mpi/tags/0.15-3/debian/control
trunk/packages/clustalw-mpi/tags/0.15-3/debian/copyright
Removed:
trunk/packages/clustalw-mpi/tags/0.15-3/debian/changelog
trunk/packages/clustalw-mpi/tags/0.15-3/debian/clustalw-mpi.1
trunk/packages/clustalw-mpi/tags/0.15-3/debian/compat
trunk/packages/clustalw-mpi/tags/0.15-3/debian/control
trunk/packages/clustalw-mpi/tags/0.15-3/debian/copyright
Log:
[svn-buildpackage] Tagging clustalw-mpi 0.15-3
Deleted: trunk/packages/clustalw-mpi/tags/0.15-3/debian/changelog
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/changelog 2013-09-06 11:13:26 UTC (rev 14608)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/changelog 2013-09-08 01:16:56 UTC (rev 14618)
@@ -1,105 +0,0 @@
-clustalw-mpi (0.15-2) unstable; urgency=low
-
- * debian/control:
- - Fixed Vcs-Fields
- - Updated Standards-Version to 3.9.3 (no changes needed)
- - Homepage has changed
- - Build-Depends: mpi-default-dev
- Closes: #661740
- - Depends ${misc:Depends}
- - Dropped Build-Depends: cdbs
- * debian/source/format: 3.0 (quilt)
- * Debhelper compat level 8 (control+compat)
- * debian/copyright: Fixed DEP5 issues using
- cme fix dpkg-copyright
- * deleted debian/README.Debian because there is no point in just
- using different words for a package beeing in non-free as it is
- just said in debian/copyright
- * debian/watch: Deleted because not working
- * debian/rules:
- - Delete get-orig-source target because not working any more
- because source vanished
- - Rewritten using dh
- * debian/upstream: bibliographic information
- * debian/README.source: document missing source code for current version
-
- -- Andreas Tille <tille at debian.org> Thu, 01 Mar 2012 12:16:54 +0100
-
-clustalw-mpi (0.15-1) unstable; urgency=low
-
- * New upstream release.
- - Fixes crash when the length of a sequence's name was longer than 60
- characters. You must re-define macro MAXNAMES in order to process FASTA
- file with sequence names longer than the default length.
- * Updated my email address.
- * Updated upstreams' email address.
- * Refreshed the manpage.
- * debian/copyright:
- - Lifted debian/copyright to the latest version, and licenced my
- contribution to this packaging work to "Same as CLUSTALW-MPI".
- - Added a disclaimer clarifying that this package is not part of the
- Debian operating system (requirement of Policy 3.8.0).
- * debian/patches/01_Makefile.patch removed.
- Its function is now carried out by debian/rules and debhelper.
- * debian/rules switched to CDBS.
- * debian/control:
- - Dropped build-dependancy on quilt and added one on cdbs.
- - Updated Standards-Version to 3.8.0.
-
- -- Charles Plessy <plessy at debian.org> Sat, 05 Jul 2008 17:22:23 +0900
-
-clustalw-mpi (0.14-1) unstable; urgency=low
-
- [ Andreas Tille ]
- * Put package under group maintenance of Debian-Med Team
- - DM-Upload-Allowed: Yes
- - Vcs tags
- - Use correct address as Uploader: Steffen Moeller <moeller at debian.org>
- * Switched to quilt
- - Move manpage to debian dir and added debian/manpages
- - Patched Makefile accordingly
- - removed useless t.sh
- * Standards-Version: 3.7.3 (no changes needed)
- * debhelper >= 5
- * Moved Homepage from long description to control fields
- * debian/copyright machine readable
- * Removed [Biology] from short description
-
- [ Charles Plessy ]
- * Bug fix version 0.14 released on Dec 19, 2005.
- See /usr/share/doc/clustalw-mpi/History for more details.
- * Updated debian/patches for the new upstream version.
- * Added myself to the Hall of Fame of debian/copyright
- and to the Uploaders in debian/control.
- * Updated homepage in debian/copyright and debian/control.
- * Added debian/watch file.
- * debian/clustalw-mpi.1: incremented version number.
- * debian/control:
- - Dropped versioned dependencies on lam packages, as they
- are satisfied even in Sarge.
- - Updated homepage of Clustal.
-
- -- Andreas Tille <tille at debian.org> Sun, 06 Apr 2008 20:23:04 +0200
-
-clustalw-mpi (0.13-3) unstable; urgency=low
-
- * Updated lam4 to 7.1.1 (Closes: Bug#329488)
-
- -- Steffen Moeller <moeller at pzr.uni-rostock.de> Wed, 12 Oct 2005 15:07:41 +0200
-
-clustalw-mpi (0.13-2) unstable; urgency=low
-
- * Updated lam3 to lam4 (Closes: #229939)
-
- -- Steffen Moeller <moeller at pzr.uni-rostock.de> Mon, 30 Jun 2003 22:54:41 +0200
-
-clustalw-mpi (0.13-1) unstable; urgency=low
-
- * Initial Release. (Closes: #199837)
- * Upstream author was very supportive
- - provided man page
- - provided license information
- * Minimal changes to the makefile
-
- -- Steffen Moeller <moeller at pzr.uni-rostock.de> Mon, 30 Jun 2003 22:54:41 +0200
-
Copied: trunk/packages/clustalw-mpi/tags/0.15-3/debian/changelog (from rev 14617, trunk/packages/clustalw-mpi/trunk/debian/changelog)
===================================================================
--- trunk/packages/clustalw-mpi/tags/0.15-3/debian/changelog (rev 0)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/changelog 2013-09-08 01:16:56 UTC (rev 14618)
@@ -0,0 +1,118 @@
+clustalw-mpi (0.15-3) unstable; urgency=low
+
+ * Removed obsolete DM-Upload-Allowed field.
+ * Using Debhelper 9.
+ * Normalised VCS URLs.
+ * Normalised debian/control using config-model.
+ * Conforms to Policy 3.9.4.
+ * Version link to GPL-2 in debian/copyright.
+ * Escape minus sign in ‘debian/clustalw-mpi.1’.
+ * Uploaded for openmpi transition (Closes: #722073).
+
+ -- Charles Plessy <plessy at debian.org> Sun, 08 Sep 2013 10:08:06 +0900
+
+clustalw-mpi (0.15-2) unstable; urgency=low
+
+ * debian/control:
+ - Fixed Vcs-Fields
+ - Updated Standards-Version to 3.9.3 (no changes needed)
+ - Homepage has changed
+ - Build-Depends: mpi-default-dev
+ Closes: #661740
+ - Depends ${misc:Depends}
+ - Dropped Build-Depends: cdbs
+ * debian/source/format: 3.0 (quilt)
+ * Debhelper compat level 8 (control+compat)
+ * debian/copyright: Fixed DEP5 issues using
+ cme fix dpkg-copyright
+ * deleted debian/README.Debian because there is no point in just
+ using different words for a package beeing in non-free as it is
+ just said in debian/copyright
+ * debian/watch: Deleted because not working
+ * debian/rules:
+ - Delete get-orig-source target because not working any more
+ because source vanished
+ - Rewritten using dh
+ * debian/upstream: bibliographic information
+ * debian/README.source: document missing source code for current version
+
+ -- Andreas Tille <tille at debian.org> Thu, 01 Mar 2012 12:16:54 +0100
+
+clustalw-mpi (0.15-1) unstable; urgency=low
+
+ * New upstream release.
+ - Fixes crash when the length of a sequence's name was longer than 60
+ characters. You must re-define macro MAXNAMES in order to process FASTA
+ file with sequence names longer than the default length.
+ * Updated my email address.
+ * Updated upstreams' email address.
+ * Refreshed the manpage.
+ * debian/copyright:
+ - Lifted debian/copyright to the latest version, and licenced my
+ contribution to this packaging work to "Same as CLUSTALW-MPI".
+ - Added a disclaimer clarifying that this package is not part of the
+ Debian operating system (requirement of Policy 3.8.0).
+ * debian/patches/01_Makefile.patch removed.
+ Its function is now carried out by debian/rules and debhelper.
+ * debian/rules switched to CDBS.
+ * debian/control:
+ - Dropped build-dependancy on quilt and added one on cdbs.
+ - Updated Standards-Version to 3.8.0.
+
+ -- Charles Plessy <plessy at debian.org> Sat, 05 Jul 2008 17:22:23 +0900
+
+clustalw-mpi (0.14-1) unstable; urgency=low
+
+ [ Andreas Tille ]
+ * Put package under group maintenance of Debian-Med Team
+ - DM-Upload-Allowed: Yes
+ - Vcs tags
+ - Use correct address as Uploader: Steffen Moeller <moeller at debian.org>
+ * Switched to quilt
+ - Move manpage to debian dir and added debian/manpages
+ - Patched Makefile accordingly
+ - removed useless t.sh
+ * Standards-Version: 3.7.3 (no changes needed)
+ * debhelper >= 5
+ * Moved Homepage from long description to control fields
+ * debian/copyright machine readable
+ * Removed [Biology] from short description
+
+ [ Charles Plessy ]
+ * Bug fix version 0.14 released on Dec 19, 2005.
+ See /usr/share/doc/clustalw-mpi/History for more details.
+ * Updated debian/patches for the new upstream version.
+ * Added myself to the Hall of Fame of debian/copyright
+ and to the Uploaders in debian/control.
+ * Updated homepage in debian/copyright and debian/control.
+ * Added debian/watch file.
+ * debian/clustalw-mpi.1: incremented version number.
+ * debian/control:
+ - Dropped versioned dependencies on lam packages, as they
+ are satisfied even in Sarge.
+ - Updated homepage of Clustal.
+
+ -- Andreas Tille <tille at debian.org> Sun, 06 Apr 2008 20:23:04 +0200
+
+clustalw-mpi (0.13-3) unstable; urgency=low
+
+ * Updated lam4 to 7.1.1 (Closes: Bug#329488)
+
+ -- Steffen Moeller <moeller at pzr.uni-rostock.de> Wed, 12 Oct 2005 15:07:41 +0200
+
+clustalw-mpi (0.13-2) unstable; urgency=low
+
+ * Updated lam3 to lam4 (Closes: #229939)
+
+ -- Steffen Moeller <moeller at pzr.uni-rostock.de> Mon, 30 Jun 2003 22:54:41 +0200
+
+clustalw-mpi (0.13-1) unstable; urgency=low
+
+ * Initial Release. (Closes: #199837)
+ * Upstream author was very supportive
+ - provided man page
+ - provided license information
+ * Minimal changes to the makefile
+
+ -- Steffen Moeller <moeller at pzr.uni-rostock.de> Mon, 30 Jun 2003 22:54:41 +0200
+
Deleted: trunk/packages/clustalw-mpi/tags/0.15-3/debian/clustalw-mpi.1
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/clustalw-mpi.1 2013-09-06 11:13:26 UTC (rev 14608)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/clustalw-mpi.1 2013-09-08 01:16:56 UTC (rev 14618)
@@ -1,43 +0,0 @@
-.\"
-.\" The man page was derived from the man page of Chet Ramey for the BASH
-.\"
-
-.TH CLUSTALW\-MPI 1 "2008\ June\ 3" "ClustalW\-MPI 0.15"
-
-.SH NAME
-ClustalW-MPI \- MPI distributed ClustalW
-
-.SH SYNOPSIS
-mpirun [\fImpirun_options\fR] clustalw-mpi [\fIclustalw options\fR]
-
-.SH DESCRIPTION
-.B ClustalW-MPI
-is an MPI implementation of ClustalW. It utilizes your networked computers to
-globally align sets of nucleic or amino acid sequences.
-
-.SH EXAMPLES
-To make a full multiple sequence alignment (using one master node and 4 computing nodes):
-
-mpirun -np 5 ./clustalw-mpi -infile=dele.input
-
-
-To make a guide tree only:
-
-mpirun -np 5 ./clustalw-mpi -infile=dele.input -newtree=dele.mytree
-
-
-To make a multiple sequence alignment out of an existing tree:
-
-mpirun -np 5 ./clustalw-mpi -infile=dele.input -usetree=dele.mytree
-
-.SH COPYRIGHT
-.if n clutalw-mpi is Copyright (C) 2003 by Dr. Kuo-Bin Li, Bioinformatics Institute, Singapure
-.if t clutalw-mpi is Copyright \(co 2003 by Dr. Kuo-Bin Li, Bioinformatics Institute, Singapure
-
-.SH OPTIONS
-See man page for clustalw.
-.SH SEE ALSO
-.B clustalw
-(1)
-.SH AUTHORS
-Dr. Kuo-Bin Li <kbli at ym.edu.tw>, Bioinformatics Institute, Singapore.
Copied: trunk/packages/clustalw-mpi/tags/0.15-3/debian/clustalw-mpi.1 (from rev 14616, trunk/packages/clustalw-mpi/trunk/debian/clustalw-mpi.1)
===================================================================
--- trunk/packages/clustalw-mpi/tags/0.15-3/debian/clustalw-mpi.1 (rev 0)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/clustalw-mpi.1 2013-09-08 01:16:56 UTC (rev 14618)
@@ -0,0 +1,43 @@
+.\"
+.\" The man page was derived from the man page of Chet Ramey for the BASH
+.\"
+
+.TH CLUSTALW\-MPI 1 "2008\ June\ 3" "ClustalW\-MPI 0.15"
+
+.SH NAME
+ClustalW-MPI \- MPI distributed ClustalW
+
+.SH SYNOPSIS
+mpirun [\fImpirun_options\fR] clustalw-mpi [\fIclustalw options\fR]
+
+.SH DESCRIPTION
+.B ClustalW-MPI
+is an MPI implementation of ClustalW. It utilizes your networked computers to
+globally align sets of nucleic or amino acid sequences.
+
+.SH EXAMPLES
+To make a full multiple sequence alignment (using one master node and 4 computing nodes):
+
+mpirun \-np 5 ./clustalw-mpi \-infile=dele.input
+
+
+To make a guide tree only:
+
+mpirun \-np 5 ./clustalw-mpi \-infile=dele.input \-newtree=dele.mytree
+
+
+To make a multiple sequence alignment out of an existing tree:
+
+mpirun \-np 5 ./clustalw-mpi \-infile=dele.input \-usetree=dele.mytree
+
+.SH COPYRIGHT
+.if n clutalw-mpi is Copyright (C) 2003 by Dr. Kuo-Bin Li, Bioinformatics Institute, Singapure
+.if t clutalw-mpi is Copyright \(co 2003 by Dr. Kuo-Bin Li, Bioinformatics Institute, Singapure
+
+.SH OPTIONS
+See man page for clustalw.
+.SH SEE ALSO
+.B clustalw
+(1)
+.SH AUTHORS
+Dr. Kuo-Bin Li <kbli at ym.edu.tw>, Bioinformatics Institute, Singapore.
Deleted: trunk/packages/clustalw-mpi/tags/0.15-3/debian/compat
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/compat 2013-09-06 11:13:26 UTC (rev 14608)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/compat 2013-09-08 01:16:56 UTC (rev 14618)
@@ -1 +0,0 @@
-8
Copied: trunk/packages/clustalw-mpi/tags/0.15-3/debian/compat (from rev 14610, trunk/packages/clustalw-mpi/trunk/debian/compat)
===================================================================
--- trunk/packages/clustalw-mpi/tags/0.15-3/debian/compat (rev 0)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/compat 2013-09-08 01:16:56 UTC (rev 14618)
@@ -0,0 +1 @@
+9
Deleted: trunk/packages/clustalw-mpi/tags/0.15-3/debian/control
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/control 2013-09-06 11:13:26 UTC (rev 14608)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/control 2013-09-08 01:16:56 UTC (rev 14618)
@@ -1,45 +0,0 @@
-Source: clustalw-mpi
-Section: non-free/science
-Priority: optional
-Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-DM-Upload-Allowed: yes
-Uploaders: Steffen Moeller <moeller at debian.org>,
- Andreas Tille <tille at debian.org>,
- Charles Plessy <plessy at debian.org>
-Build-Depends: debhelper (>= 8), mpi-default-dev
-Standards-Version: 3.9.3
-Homepage: http://www.bii.a-star.edu.sg/achievements/applications/clustalw/
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/clustalw-mpi/trunk/
-Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/clustalw-mpi/trunk/
-XS-Autobuild: yes
-
-Package: clustalw-mpi
-Architecture: any
-Enhances: clustalw
-Suggests: seaview, clustalx
-Depends: ${shlibs:Depends}, ${misc:Depends}
-Description: MPI-distributed global sequence alignment with ClustalW
- ClustalW is a popular tool for multiple sequence alignment. The
- alignment is achieved via three steps: pairwise alignment,
- guide-tree generation and progressive alignment. ClustalW-MPI is an
- MPI implementation of ClustalW. Based on
- version 1.82 of the original ClustalW, both the pairwise
- and progressive alignments are parallelized with MPI, a
- popular message passing programming standard. The
- pairwise alignments can be easily parallelized since the many
- alignments are time independent on each other. However
- the progressive alignments are essentially not parallelizable
- because of the time dependencies between each alignment.
- .
- Here the recursive parallelism paradigm is applied to the linear space
- profile-profile alignment algorithm. This approach is more time
- efficient on computers with distributed memory architecture.
- Traditional approach that relies on precomputing the profile-profile
- score matrix has also been implemented. Results shown the latter is indeed
- more appropriate for shared memory multiprocessor computer.
- .
- ClustalX is suggested for its support for local realignments, seaview
- is a versatile editor of alignments.
- .
- The original ClustalW/ClustalX can be found at
- URL: http://www.clustal.org/download/pre-2/
Copied: trunk/packages/clustalw-mpi/tags/0.15-3/debian/control (from rev 14613, trunk/packages/clustalw-mpi/trunk/debian/control)
===================================================================
--- trunk/packages/clustalw-mpi/tags/0.15-3/debian/control (rev 0)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/control 2013-09-08 01:16:56 UTC (rev 14618)
@@ -0,0 +1,48 @@
+Source: clustalw-mpi
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Steffen Moeller <moeller at debian.org>,
+ Andreas Tille <tille at debian.org>,
+ Charles Plessy <plessy at debian.org>
+Section: non-free/science
+Priority: optional
+Build-Depends: debhelper (>= 9),
+ mpi-default-dev
+Standards-Version: 3.9.4
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/clustalw-mpi/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/clustalw-mpi/trunk/
+Homepage: http://www.bii.a-star.edu.sg/achievements/applications/clustalw/
+XS-Autobuild: yes
+
+Package: clustalw-mpi
+Architecture: any
+Depends: ${shlibs:Depends},
+ ${misc:Depends}
+Suggests: seaview,
+ clustalx
+Enhances: clustalw
+Description: MPI-distributed global sequence alignment with ClustalW
+ ClustalW is a popular tool for multiple sequence alignment. The
+ alignment is achieved via three steps: pairwise alignment,
+ guide-tree generation and progressive alignment. ClustalW-MPI is an
+ MPI implementation of ClustalW. Based on
+ version 1.82 of the original ClustalW, both the pairwise
+ and progressive alignments are parallelized with MPI, a
+ popular message passing programming standard. The
+ pairwise alignments can be easily parallelized since the many
+ alignments are time independent on each other. However
+ the progressive alignments are essentially not parallelizable
+ because of the time dependencies between each alignment.
+ .
+ Here the recursive parallelism paradigm is applied to the linear space
+ profile-profile alignment algorithm. This approach is more time
+ efficient on computers with distributed memory architecture.
+ Traditional approach that relies on precomputing the profile-profile
+ score matrix has also been implemented. Results shown the latter is indeed
+ more appropriate for shared memory multiprocessor computer.
+ .
+ ClustalX is suggested for its support for local realignments, seaview
+ is a versatile editor of alignments.
+ .
+ The original ClustalW/ClustalX can be found at
+ URL: http://www.clustal.org/download/pre-2/
+
Deleted: trunk/packages/clustalw-mpi/tags/0.15-3/debian/copyright
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/copyright 2013-09-06 11:13:26 UTC (rev 14608)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/copyright 2013-09-08 01:16:56 UTC (rev 14618)
@@ -1,35 +0,0 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
-Upstream-Name: ClustalW-MPI
-Upstream-Contact: Dr. Kuo-Bin Li <kbli at ym.edu.tw>
-Source: http://kmlvli.com/kuobin/clustalw-mpi/clustalw-mpi-0.15.tar.gz
-Remark: The download host vanished and the new homepage does only
- contain a previous version 0.13
-Disclamer: This package is not part of the Debian operating system.
- The clustalw-mpi source and binary Debian packages are part of the "non-free"
- area in our archive. The packages in this area are not part of the Debian
- system, although they have been configured for use with Debian. We nevertheless
- support the use of the clustalw-mpi source and binary Debian packages by
- providing infrastructure such as our bug tracking system and mailing lists.
-
-Files: *
-Copyright: © 2001-2008 Dr. Kuo-Bin Li, Bioinformatics Institute, Singapore
-License: derived_from_clustal_w
- CLUSTALW-MPI is freely available to the user community. You can
- redistribute it and/or modify it. Since CLUSTALW-MPI was derived from
- CLUSTAL W, the original license policy of CLUSTAL W is listed here:
- .
- Clustal W is freely available to the user community. However, Clustal W is
- increasingly being distributed as part of commercial sequence analysis
- packages. To help us safeguard future maintenance and development, commercial
- distributors of Clustal W must take out a NON-EXCLUSIVE LICENCE. Anyone
- wishing to commercially distribute version 1.81 of Clustal W should contact the
- authors unless they have previously taken out a licence.
-
-Files: debian/*
-Copyright: © 2003—2008 Steffen Moeller <moeller at debian.org>
- © 2008 Charles Plessy <charles-debian-nospam at plessy.org>
- © 2003—2012 Andreas Tille <tille at debian.org>
-License: GPL-2+
- On Debian systems, the complete text of the GNU General
- Public License can be found in `/usr/share/common-licenses/GPL'.
-
Copied: trunk/packages/clustalw-mpi/tags/0.15-3/debian/copyright (from rev 14614, trunk/packages/clustalw-mpi/trunk/debian/copyright)
===================================================================
--- trunk/packages/clustalw-mpi/tags/0.15-3/debian/copyright (rev 0)
+++ trunk/packages/clustalw-mpi/tags/0.15-3/debian/copyright 2013-09-08 01:16:56 UTC (rev 14618)
@@ -0,0 +1,35 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: ClustalW-MPI
+Upstream-Contact: Dr. Kuo-Bin Li <kbli at ym.edu.tw>
+Source: http://kmlvli.com/kuobin/clustalw-mpi/clustalw-mpi-0.15.tar.gz
+Remark: The download host vanished and the new homepage does only
+ contain a previous version 0.13
+Disclamer: This package is not part of the Debian operating system.
+ The clustalw-mpi source and binary Debian packages are part of the "non-free"
+ area in our archive. The packages in this area are not part of the Debian
+ system, although they have been configured for use with Debian. We nevertheless
+ support the use of the clustalw-mpi source and binary Debian packages by
+ providing infrastructure such as our bug tracking system and mailing lists.
+
+Files: *
+Copyright: © 2001-2008 Dr. Kuo-Bin Li, Bioinformatics Institute, Singapore
+License: derived_from_clustal_w
+ CLUSTALW-MPI is freely available to the user community. You can
+ redistribute it and/or modify it. Since CLUSTALW-MPI was derived from
+ CLUSTAL W, the original license policy of CLUSTAL W is listed here:
+ .
+ Clustal W is freely available to the user community. However, Clustal W is
+ increasingly being distributed as part of commercial sequence analysis
+ packages. To help us safeguard future maintenance and development, commercial
+ distributors of Clustal W must take out a NON-EXCLUSIVE LICENCE. Anyone
+ wishing to commercially distribute version 1.81 of Clustal W should contact the
+ authors unless they have previously taken out a licence.
+
+Files: debian/*
+Copyright: © 2003—2008 Steffen Moeller <moeller at debian.org>
+ © 2008 Charles Plessy <charles-debian-nospam at plessy.org>
+ © 2003—2012 Andreas Tille <tille at debian.org>
+License: GPL-2+
+ On Debian systems, the complete text of the GNU General Public License
+ version 2 can be found in `/usr/share/common-licenses/GPL-2'.
+
More information about the debian-med-commit
mailing list