[med-svn] r14645 - in trunk/packages/biojava/tags: . 1:1.7.1-3/debian

Tue Sep 10 08:40:48 UTC 2013

Author: osallou
Date: 2013-09-10 08:40:47 +0000 (Tue, 10 Sep 2013)
New Revision: 14645

Added:
   trunk/packages/biojava/tags/1:1.7.1-3/
   trunk/packages/biojava/tags/1:1.7.1-3/debian/control
Removed:
   trunk/packages/biojava/tags/1:1.7.1-3/debian/control
Log:
[svn-buildpackage] Tagging biojava-live 1:1.7.1-3

Deleted: trunk/packages/biojava/tags/1:1.7.1-3/debian/control
===================================================================

--- trunk/packages/biojava/branches/1.7.1/debian/control	2013-09-10 07:51:11 UTC (rev 14643)
+++ trunk/packages/biojava/tags/1:1.7.1-3/debian/control	2013-09-10 08:40:47 UTC (rev 14645)
@@ -1,81 +0,0 @@
-Source: biojava-live
-Section: java
-Priority: optional
-Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Steffen Moeller <moeller at debian.org>,
- Andreas Tille <tille at debian.org>
-Build-Depends-Indep: libcommons-dbcp-java (>= 1.1), libhsqldb-java,
- libcommons-collections3-java (>= 2.1), libcommons-pool-java (>= 1.1),
- libbytecode-java (>= 0.92.cvs.20070925),
- default-jdk, junit4,
- ant-optional
-Build-Depends: debhelper (>= 9), cdbs, ant
-Standards-Version: 3.9.4
-Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/biojava/trunk/
-Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/biojava/trunk/
-Homepage: http://www.biojava.org
-
-Package: libbiojava1.7-java
-Architecture: all
-Depends: ${shlibs:Depends}, ${misc:Depends},
- libcommons-pool-java (>= 1.1),
- libcommons-collections-java (>= 2.1),
- libcommons-dbcp-java (>= 1.1),
- libhsqldb-java,
- libbytecode-java
-Suggests: java-virtual-machine, libjgrapht-java, libbiojava-java, libbiojava-java-doc
-Conflicts: libbiojava1.6-java
-Replaces: libbiojava1.6-java
-Description: Java API to biological data and applications (version 1.7)
- This package presents the Open Source Java API to biological databases
- and a series of mostly sequence-based algorithms. The APIs are not
- compatible between versions. In analogy to the dealing with shared
- libraries of the C language, the jar file of this package has the
- API version in its name. It is symbolically linked to the expected
- biojava.jar filename in the package libbiojava-java. This will help
- keeping multiple versions of the biojava API in parallel.
-
-Package: libbiojava-java
-Architecture: all
-Depends: libbiojava1.7-java, ${misc:Depends}
-Conflicts: libbiojava1.6-java
-Replaces: libbiojava1.6-java
-Description: Java API to biological data and applications (default version)
- BioJava is an open-source project dedicated to providing a Java framework
- for processing biological data. It includes objects for manipulating
- sequences, file parsers, DAS client and server support, access to BioSQL
- and Ensembl databases, and powerful analysis and statistical routines
- including a dynamic programming toolkit.
- .
- BioJava is provided by a vibrant community which meets annually at
- the Bioinformatics Open Source Conference (BOSC) that traditionally
- accompanies the Intelligent Systems in Molecular Biology (ISMB)
- meeting. Much like BioPerl, the employment of this library is valuable
- for everybody active in the field because of the many tricks of the
- trade one learns just by communicating on the mailing list.
- .
- This is a wrapper package which should enable smooth upgrades to new
- versions.
-
-Package: libbiojava-java-demos
-Architecture: all
-Depends: ${misc:Depends}
-Recommends: libbiojava-java
-Description: Example programs for BioJava
- The package comes with a wealth of use cases for BioJava. It is generated
- together with the API documentation but because of its size of ~3.7MB it
- was decided to distribute it separately.
-
-
-Package: libbiojava-java-doc
-Section: doc
-Architecture: all
-Depends: ${misc:Depends}
-Recommends: konqueror|html-browser
-Suggests: libbiojava-java-demos, libbiojava-java
-Description: [Biology] Documentation for BioJava
- BioJava is an open-source project dedicated to providing a Java framework
- for processing biological data.
- .
- This package contains the HTML documentation describing the API of BioJava
- which was generated automatically by JavaDoc.

Copied: trunk/packages/biojava/tags/1:1.7.1-3/debian/control (from rev 14644, trunk/packages/biojava/branches/1.7.1/debian/control)
===================================================================
--- trunk/packages/biojava/tags/1:1.7.1-3/debian/control	                        (rev 0)
+++ trunk/packages/biojava/tags/1:1.7.1-3/debian/control	2013-09-10 08:40:47 UTC (rev 14645)
@@ -0,0 +1,82 @@
+Source: biojava-live
+Section: java
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Steffen Moeller <moeller at debian.org>,
+ Andreas Tille <tille at debian.org>,
+ Olivier Sallou <osallou at debian.org>
+Build-Depends-Indep: libcommons-dbcp-java (>= 1.1), libhsqldb-java,
+ libcommons-collections3-java (>= 2.1), libcommons-pool-java (>= 1.1),
+ libbytecode-java (>= 0.92.cvs.20070925),
+ default-jdk, junit4,
+ ant-optional
+Build-Depends: debhelper (>= 9), cdbs, ant
+Standards-Version: 3.9.4
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/biojava/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/biojava/trunk/
+Homepage: http://www.biojava.org
+
+Package: libbiojava1.7-java
+Architecture: all
+Depends: ${shlibs:Depends}, ${misc:Depends},
+ libcommons-pool-java (>= 1.1),
+ libcommons-collections-java (>= 2.1),
+ libcommons-dbcp-java (>= 1.1),
+ libhsqldb-java,
+ libbytecode-java
+Suggests: java-virtual-machine, libjgrapht-java, libbiojava-java, libbiojava-java-doc
+Conflicts: libbiojava1.6-java
+Replaces: libbiojava1.6-java
+Description: Java API to biological data and applications (version 1.7)
+ This package presents the Open Source Java API to biological databases
+ and a series of mostly sequence-based algorithms. The APIs are not
+ compatible between versions. In analogy to the dealing with shared
+ libraries of the C language, the jar file of this package has the
+ API version in its name. It is symbolically linked to the expected
+ biojava.jar filename in the package libbiojava-java. This will help
+ keeping multiple versions of the biojava API in parallel.
+
+Package: libbiojava-java
+Architecture: all
+Depends: libbiojava1.7-java, ${misc:Depends}
+Conflicts: libbiojava1.6-java
+Replaces: libbiojava1.6-java
+Description: Java API to biological data and applications (default version)
+ BioJava is an open-source project dedicated to providing a Java framework
+ for processing biological data. It includes objects for manipulating
+ sequences, file parsers, DAS client and server support, access to BioSQL
+ and Ensembl databases, and powerful analysis and statistical routines
+ including a dynamic programming toolkit.
+ .
+ BioJava is provided by a vibrant community which meets annually at
+ the Bioinformatics Open Source Conference (BOSC) that traditionally
+ accompanies the Intelligent Systems in Molecular Biology (ISMB)
+ meeting. Much like BioPerl, the employment of this library is valuable
+ for everybody active in the field because of the many tricks of the
+ trade one learns just by communicating on the mailing list.
+ .
+ This is a wrapper package which should enable smooth upgrades to new
+ versions.
+
+Package: libbiojava-java-demos
+Architecture: all
+Depends: ${misc:Depends}
+Recommends: libbiojava-java
+Description: Example programs for BioJava
+ The package comes with a wealth of use cases for BioJava. It is generated
+ together with the API documentation but because of its size of ~3.7MB it
+ was decided to distribute it separately.
+
+
+Package: libbiojava-java-doc
+Section: doc
+Architecture: all
+Depends: ${misc:Depends}
+Recommends: konqueror|html-browser
+Suggests: libbiojava-java-demos, libbiojava-java
+Description: [Biology] Documentation for BioJava
+ BioJava is an open-source project dedicated to providing a Java framework
+ for processing biological data.
+ .
+ This package contains the HTML documentation describing the API of BioJava
+ which was generated automatically by JavaDoc.


