[med-svn] [pycorrfit] branch upstream updated (e694669 -> cc4ac82)
Alex Mestiashvili
malex-guest at moszumanska.debian.org
Tue Apr 15 12:41:45 UTC 2014
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malex-guest pushed a change to branch upstream
in repository pycorrfit.
from e694669 Imported Upstream version 0.8.2
new cc4ac82 Imported Upstream version 0.8.3
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
ChangeLog.txt | 18 +
PyCorrFit_doc.pdf | Bin 568711 -> 581216 bytes
README.md | 4 +-
Readme.txt | 31 +-
doc-src/Bibliography.bib | 97 +++++-
doc-src/Images/PyCorrFit_Screenshot_CSFCS.png | Bin 123086 -> 121034 bytes
doc-src/Images/PyCorrFit_Screenshot_Main.png | Bin 89638 -> 90374 bytes
doc-src/PyCorrFit_doc_content.tex | 69 ++--
doc-src/PyCorrFit_doc_models.tex | 10 +-
doc-src/README.md | 23 ++
...C.fcsfit-session.zip => CSFCS_DiO-in-DOPC.pcfs} | Bin 387189 -> 386691 bytes
...session.zip => ConfocalFCS_Alexa488_xcorr.pcfs} | Bin 71711 -> 69822 bytes
src/PyCorrFit.py | 43 ++-
src/__init__.py | 2 +-
src/doc.py | 47 ++-
src/edclasses.py | 24 +-
src/{leastsquaresfit.py => fitting.py} | 167 +++++++---
src/frontend.py | 166 +++++++---
src/models/MODEL_TIRF_gaussian_1C.py | 167 +++++++++-
src/models/MODEL_TIRF_gaussian_3D2D.py | 9 +-
src/models/MODEL_TIRF_gaussian_3D3D.py | 11 +-
src/models/MODEL_classic_gaussian_2D.py | 14 +-
src/models/MODEL_classic_gaussian_3D.py | 22 +-
src/models/MODEL_classic_gaussian_3D2D.py | 19 +-
src/models/__init__.py | 32 +-
src/openfile.py | 23 +-
src/page.py | 133 +++++---
src/plotting.py | 100 ++++--
src/readfiles/__init__.py | 28 +-
src/readfiles/read_ASC_ALV.py | 368 +++++++++++++++++++++
src/readfiles/read_ASC_ALV_6000.py | 177 ----------
src/readfiles/read_FCS_Confocor3.py | 41 ++-
src/tools/__init__.py | 17 +
src/tools/average.py | 36 +-
src/tools/background.py | 11 +-
src/tools/batchcontrol.py | 27 +-
src/tools/datarange.py | 4 +-
src/tools/example.py | 9 +-
src/tools/globalfit.py | 11 +-
src/tools/info.py | 22 +-
src/tools/overlaycurves.py | 35 +-
src/tools/parmrange.py | 11 +-
src/tools/plotexport.py | 9 +-
src/tools/simulation.py | 12 +-
src/tools/statistics.py | 107 +++---
src/tools/trace.py | 24 +-
src/usermodel.py | 3 +-
47 files changed, 1577 insertions(+), 606 deletions(-)
create mode 100644 doc-src/README.md
rename sample_sessions/{CSFCS_DiO-in-DOPC.fcsfit-session.zip => CSFCS_DiO-in-DOPC.pcfs} (98%)
rename sample_sessions/{ConfocalFCS_Alexa488_xcorr.fcsfit-session.zip => ConfocalFCS_Alexa488_xcorr.pcfs} (93%)
rename src/{leastsquaresfit.py => fitting.py} (75%)
create mode 100755 src/readfiles/read_ASC_ALV.py
delete mode 100755 src/readfiles/read_ASC_ALV_6000.py
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