[med-svn] [python-pysam] branch upstream updated (3932a10 -> a757e53)

[Charles Plessy]

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plessy pushed a change to branch upstream
in repository python-pysam.

      from  3932a10   Imported Upstream version 0.7.5
      adds  15fc052   Imported Upstream version 0.7.6
      adds  a757e53   Imported Upstream version 0.7.7

No new revisions were added by this update.

Summary of changes:
 PKG-INFO                   |     2 +-
 distribute_setup.py        |   546 -
 doc/faq.rst                |    68 +
 doc/release.rst            |    14 +
 doc/usage.rst              |     7 +-
 pysam.egg-info/PKG-INFO    |     2 +-
 pysam.egg-info/SOURCES.txt |     1 -
 pysam/TabProxies.c         |    60 +-
 pysam/TabProxies.pyx       |     2 +-
 pysam/csamtools.c          | 55753 +++++++++++++++++++++++--------------------
 pysam/csamtools.pxd        |    39 +-
 pysam/csamtools.pyx        |   355 +-
 pysam/ctabix.c             |  5259 ++--
 pysam/ctabix.pxd           |    63 +-
 pysam/ctabix.pyx           |   262 +-
 pysam/cvcf.c               |   443 +-
 pysam/pysam_util.c         |     3 +
 pysam/pysam_util.h         |     6 +
 pysam/tabix_util.c         |    24 +
 pysam/tabix_util.h         |     7 +
 pysam/version.py           |     2 +-
 setup.py                   |    11 +-
 tests/Makefile             |     8 +-
 tests/pysam_test.py        |   110 +-
 tests/tabix_test.py        |   167 +-
 25 files changed, 33283 insertions(+), 29931 deletions(-)
 delete mode 100644 distribute_setup.py

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