[med-svn] r16800 - in trunk/packages/mothur/trunk/debian: . patches

[Andreas Tille]

Author: tille
Date: 2014-04-25 18:30:36 +0000 (Fri, 25 Apr 2014)
New Revision: 16800

Modified:
   trunk/packages/mothur/trunk/debian/changelog
   trunk/packages/mothur/trunk/debian/patches/find_pat_files
Log:
Release changes of BioLinux into Debian


Modified: trunk/packages/mothur/trunk/debian/changelog
===================================================================
--- trunk/packages/mothur/trunk/debian/changelog	2014-04-25 17:46:34 UTC (rev 16799)
+++ trunk/packages/mothur/trunk/debian/changelog	2014-04-25 18:30:36 UTC (rev 16800)
@@ -1,3 +1,11 @@
+mothur (1.33.3+dfsg-2) unstable; urgency=medium
+
+  * Re-Add changes from BioLinux which reads in SVN:
+    Add the important .pat files and tell Mothur how to find them
+    (certainly not in /usr/bin) (see debian/patches/find_pat_files)
+
+ -- Andreas Tille <tille at debian.org>  Fri, 25 Apr 2014 17:39:09 +0200
+
 mothur (1.33.3+repack-0biolinux2) trusty; urgency=low
 
   * Refresh patches and build for Ubuntu Trusty
@@ -75,9 +83,6 @@
 
  -- Tim Booth <tbooth at ceh.ac.uk>  Thu, 10 Jan 2013 15:22:35 +0000
 
-mothur (1.27.0+dfsg-1) UNRELEASED; urgency=low
-=======
-
 mothur (1.27.0+repack-precise1) precise; urgency=low
 
   * Remove -march=native from makefile as this makes the result

Modified: trunk/packages/mothur/trunk/debian/patches/find_pat_files
===================================================================
--- trunk/packages/mothur/trunk/debian/patches/find_pat_files	2014-04-25 17:46:34 UTC (rev 16799)
+++ trunk/packages/mothur/trunk/debian/patches/find_pat_files	2014-04-25 18:30:36 UTC (rev 16800)
@@ -1,6 +1,9 @@
-Mothur ships with some .pat files which are needed by a couple of commands.
-Default behaviour is to fall back to looking in the exec dir, which makes
-no sense in a package, so redirect it.
+Author: Tim Booth <tbooth at ceh.ac.uk>
+Last-Update: Thu, 24 Apr 2014 18:41:42 +0100
+Description: Mothur ships with some .pat files which are needed by a couple of commands.
+ Default behaviour is to fall back to looking in the exec dir, which makes
+ no sense in a package, so redirect it.
+
 --- a/shhhercommand.cpp
 +++ b/shhhercommand.cpp
 @@ -314,10 +314,10 @@