[med-svn] r16817 - trunk/packages/python-biopython/trunk/debian/patches

[Andreas Tille]

Author: tille
Date: 2014-04-27 14:58:12 +0000 (Sun, 27 Apr 2014)
New Revision: 16817

Added:
   trunk/packages/python-biopython/trunk/debian/patches/add_missing_test_Fasttree_tool.patch
Modified:
   trunk/packages/python-biopython/trunk/debian/patches/series
Log:
add missing test_Fasttree_tool ... but this does not help for the test result


Added: trunk/packages/python-biopython/trunk/debian/patches/add_missing_test_Fasttree_tool.patch
===================================================================
--- trunk/packages/python-biopython/trunk/debian/patches/add_missing_test_Fasttree_tool.patch	                        (rev 0)
+++ trunk/packages/python-biopython/trunk/debian/patches/add_missing_test_Fasttree_tool.patch	2014-04-27 14:58:12 UTC (rev 16817)
@@ -0,0 +1,42 @@
+Author: Peter Cock <p.j.a.cock at googlemail.com>
+Last-Update: Sun, 27 Apr 2014 13:21:14 +0100
+Description: Add file which is missing for no good reason
+ from upstream source tarball.  It was obtained from
+   https://raw.githubusercontent.com/biopython/biopython/2b414d8a9ca0aa15ef4b4b3680b8bfc755776b56/Tests/output/test_Fasttree_tool
+
+--- /dev/null
++++ b/Tests/output/test_Fasttree_tool
+@@ -0,0 +1,33 @@
++test_Fasttree_tool
++Checking error conditions
++=========================
++Empty file
++Failed (good)
++
++Single sequence
++Failed (good)
++
++Invalid sequence
++Failed (good)
++
++Checking normal situations
++==========================
++
++Calling fasttree on 'Quality/example.fasta' (with 3 records)
++
++Checking generation of tree terminals
++Success
++
++Checking distances between tree terminals
++Success
++
++Calling fasttree on 'Clustalw/temp horses.fasta' (with 10 records)
++
++Checking generation of tree terminals
++Success
++
++Checking distances between tree terminals
++Success
++
++Done
++

Modified: trunk/packages/python-biopython/trunk/debian/patches/series
===================================================================
--- trunk/packages/python-biopython/trunk/debian/patches/series	2014-04-27 14:56:50 UTC (rev 16816)
+++ trunk/packages/python-biopython/trunk/debian/patches/series	2014-04-27 14:58:12 UTC (rev 16817)
@@ -1 +1,2 @@
 fix_test_emboss.patch
+add_missing_test_Fasttree_tool.patch