[med-svn] [python-mne] 02/04: Merge tag 'upstream/0.8'
Alexandre Gramfort
agramfort-guest at moszumanska.debian.org
Fri Aug 1 22:13:54 UTC 2014
This is an automated email from the git hooks/post-receive script.
agramfort-guest pushed a commit to branch master
in repository python-mne.
commit 47508c84c97abed939876a12a6f8a3af737b9b97
Merge: ae8bf5a 653a682
Author: Alexandre Gramfort <alexandre.gramfort at m4x.org>
Date: Thu Jul 31 23:36:17 2014 -0400
Merge tag 'upstream/0.8'
Upstream version 0.8
Conflicts:
mne/tests/test_utils.py
mne/utils.py
.coveragerc | 8 +
.gitignore | 4 +
.mailmap | 14 +
.travis.yml | 84 +-
Makefile | 7 +-
README.rst | 3 +-
bin/mne | 18 +-
doc/source/cite.rst | 6 +-
doc/source/contributing.rst | 4 +
doc/source/getting_started.rst | 203 +-
doc/source/index.rst | 12 +
doc/source/manual/cookbook.rst | 2 +-
doc/source/mne-python.rst | 1 +
doc/source/mne_report_tutorial.rst | 117 +
doc/source/python_reference.rst | 200 +-
doc/source/python_tutorial.rst | 86 +-
doc/source/whats_new.rst | 227 ++
doc/sphinxext/gen_rst.py | 33 +-
.../connectivity/plot_cwt_sensor_connectivity.py | 10 +-
.../plot_mne_inverse_coherence_epochs.py | 16 +-
.../plot_mne_inverse_connectivity_spectrum.py | 11 +-
.../plot_mne_inverse_label_connectivity.py | 43 +-
.../connectivity/plot_mne_inverse_psi_visual.py | 8 +-
examples/connectivity/plot_sensor_connectivity.py | 8 +-
examples/{ => datasets}/plot_megsim_data.py | 18 +-
.../plot_megsim_data_single_trial.py | 5 +-
examples/datasets/plot_spm_faces_dataset.py | 68 +-
examples/decoding/plot_decoding_csp_eeg.py | 150 +
examples/decoding/plot_decoding_csp_space.py | 20 +-
examples/decoding/plot_decoding_sensors.py | 14 +-
.../plot_decoding_spatio_temporal_source.py | 28 +-
.../decoding/plot_decoding_time_generalization.py | 91 +
examples/decoding/plot_ems_filtering.py | 94 +
examples/export/plot_epochs_as_data_frame.py | 16 +-
examples/export/plot_epochs_to_nitime.py | 14 +-
examples/export/plot_evoked_to_nitime.py | 12 +-
examples/export/plot_raw_to_nitime.py | 22 +-
examples/extract_events_from_raw.py | 31 -
examples/inverse/plot_compute_mne_inverse.py | 18 +-
.../plot_compute_mne_inverse_epochs_in_label.py | 73 +-
.../plot_compute_mne_inverse_raw_in_label.py | 6 +-
.../inverse/plot_compute_mne_inverse_volume.py | 8 +-
examples/inverse/plot_dics_beamformer.py | 8 +-
examples/inverse/plot_dics_source_power.py | 24 +-
examples/inverse/plot_dipole_fit_result.py | 10 +-
examples/inverse/plot_gamma_map_inverse.py | 11 +-
examples/inverse/plot_label_activation_from_stc.py | 2 +-
examples/inverse/plot_label_from_stc.py | 17 +-
examples/inverse/plot_label_source_activations.py | 9 +-
examples/inverse/plot_lcmv_beamformer.py | 10 +-
examples/inverse/plot_lcmv_beamformer_volume.py | 10 +-
examples/inverse/plot_make_inverse_operator.py | 9 +-
examples/inverse/plot_mixed_norm_L21_inverse.py | 21 +-
examples/inverse/plot_mne_crosstalk_function.py | 83 +
examples/inverse/plot_mne_point_spread_function.py | 102 +
examples/inverse/plot_morph_data.py | 4 +-
examples/inverse/plot_read_inverse.py | 12 +-
examples/inverse/plot_read_source_space.py | 6 +-
examples/inverse/plot_read_stc.py | 8 +-
examples/inverse/plot_tf_dics.py | 51 +-
examples/inverse/plot_tf_lcmv.py | 48 +-
.../plot_time_frequency_mixed_norm_inverse.py | 19 +-
examples/plot_bem_contour_mri.py | 25 +
examples/plot_channel_epochs_image.py | 12 +-
examples/plot_coregistration_transform.py | 31 +
examples/plot_decimate_head_surface.py | 4 +-
examples/plot_define_target_events.py | 16 +-
.../plot_estimate_covariance_matrix_baseline.py | 16 +-
examples/plot_estimate_covariance_matrix_raw.py | 16 +-
examples/plot_evoked_delayed_ssp.py | 17 +-
examples/plot_evoked_topomap.py | 78 +-
examples/plot_evoked_topomap_delayed_ssp.py | 14 +-
examples/plot_evoked_whitening.py | 19 +-
examples/plot_extract_events_from_raw.py | 41 +
examples/plot_from_raw_to_epochs_to_evoked.py | 27 +-
.../plot_from_raw_to_multiple_epochs_to_evoked.py | 14 +-
examples/plot_make_forward.py | 27 +-
examples/plot_meg_eeg_fields_3d.py | 37 +
examples/plot_read_and_write_raw_data.py | 14 +-
examples/plot_read_bem_surfaces.py | 6 +-
examples/plot_read_epochs.py | 15 +-
examples/plot_read_evoked.py | 19 +-
examples/plot_read_forward.py | 8 +-
examples/plot_read_noise_covariance_matrix.py | 6 +-
examples/plot_shift_evoked.py | 15 +-
examples/plot_simulate_evoked_data.py | 29 +-
examples/plot_ssp_projs_sensitivity_map.py | 15 +-
examples/plot_ssp_projs_topomaps.py | 20 +-
examples/plot_topo_channel_epochs_image.py | 14 +-
examples/plot_topo_compare_conditions.py | 12 +-
examples/plot_topo_customized.py | 62 +
examples/plot_topography.py | 9 +-
.../preprocessing/plot_eog_artifact_histogram.py | 49 +
examples/preprocessing/plot_find_ecg_artifacts.py | 14 +-
examples/preprocessing/plot_find_eog_artifacts.py | 12 +-
examples/preprocessing/plot_ica_from_epochs.py | 142 +-
examples/preprocessing/plot_ica_from_raw.py | 200 +-
examples/read_events.py | 8 +-
examples/realtime/ftclient_rt_average.py | 90 +
examples/realtime/plot_compute_rt_average.py | 10 +-
examples/realtime/plot_compute_rt_decoder.py | 10 +-
examples/realtime/rt_feedback_client.py | 2 +-
examples/realtime/rt_feedback_server.py | 12 +-
.../plot_cluster_1samp_test_time_frequency.py | 14 +-
examples/stats/plot_cluster_methods_tutorial.py | 2 +-
examples/stats/plot_cluster_stats_evoked.py | 12 +-
.../stats/plot_cluster_stats_spatio_temporal.py | 20 +-
.../plot_cluster_stats_spatio_temporal_2samp.py | 12 +-
...tats_spatio_temporal_repeated_measures_anova.py | 37 +-
.../stats/plot_cluster_stats_time_frequency.py | 12 +-
...stats_time_frequency_repeated_measures_anova.py | 16 +-
examples/stats/plot_fdr_stats_evoked.py | 12 +-
examples/stats/plot_sensor_permutation_test.py | 50 +-
examples/stats/plot_sensor_regression.py | 79 +
.../plot_compute_raw_data_spectrum.py | 13 +-
.../plot_compute_source_psd_epochs.py | 6 +-
.../time_frequency/plot_single_trial_spectra.py | 24 +-
.../plot_source_label_time_frequency.py | 10 +-
.../time_frequency/plot_source_power_spectrum.py | 14 +-
.../plot_source_space_time_frequency.py | 10 +-
examples/time_frequency/plot_temporal_whitening.py | 8 +-
examples/time_frequency/plot_tfr_topography.py | 80 -
examples/time_frequency/plot_time_frequency.py | 95 -
.../time_frequency/plot_time_frequency_sensors.py | 65 +
mne/__init__.py | 35 +-
mne/_hdf5.py | 167 +
mne/baseline.py | 2 +-
mne/beamformer/_dics.py | 19 +-
mne/beamformer/_lcmv.py | 35 +-
mne/beamformer/tests/test_dics.py | 16 +-
mne/beamformer/tests/test_lcmv.py | 40 +-
mne/channels.py | 343 ++
mne/commands/mne_browse_raw.py | 2 +-
mne/commands/mne_bti2fiff.py | 6 +-
mne/commands/mne_clean_eog_ecg.py | 29 +-
mne/commands/mne_compute_proj_ecg.py | 16 +-
mne/commands/mne_compute_proj_eog.py | 16 +-
mne/commands/mne_coreg.py | 24 +
mne/commands/mne_flash_bem_model.py | 9 +-
mne/commands/mne_kit2fiff.py | 12 +-
mne/commands/mne_make_scalp_surfaces.py | 40 +-
mne/commands/mne_report.py | 52 +
mne/commands/mne_surf2bem.py | 5 +-
mne/commands/utils.py | 11 +-
mne/connectivity/effective.py | 7 +-
mne/connectivity/spectral.py | 23 +-
mne/connectivity/tests/test_spectral.py | 2 +-
mne/coreg.py | 237 +-
mne/cov.py | 206 +-
mne/cuda.py | 26 +-
mne/data/helmets/122m.fif.gz | Bin 0 -> 4706 bytes
mne/data/helmets/306m.fif.gz | Bin 0 -> 9462 bytes
mne/data/helmets/306m_rt.fif.gz | Bin 0 -> 9443 bytes
mne/data/helmets/BabySQUID.fif.gz | Bin 0 -> 59505 bytes
mne/data/helmets/CTF_275.fif.gz | Bin 0 -> 9561 bytes
mne/data/helmets/KIT.fif.gz | Bin 0 -> 9477 bytes
mne/data/helmets/Magnes_2500wh.fif.gz | Bin 0 -> 9470 bytes
mne/data/helmets/Magnes_3600wh.fif.gz | Bin 0 -> 9475 bytes
mne/datasets/__init__.py | 4 +-
mne/datasets/eegbci/__init__.py | 4 +
mne/datasets/eegbci/eegbci.py | 203 ++
mne/datasets/megsim/megsim.py | 44 +-
mne/datasets/sample/sample.py | 17 +-
mne/datasets/somato/__init__.py | 4 +
mne/datasets/somato/somato.py | 35 +
mne/datasets/spm_face/spm_data.py | 14 +-
mne/datasets/utils.py | 91 +-
mne/decoding/__init__.py | 4 +-
mne/decoding/classifier.py | 29 +-
mne/decoding/csp.py | 15 +-
mne/decoding/ems.py | 117 +
mne/decoding/tests/test_classifier.py | 28 +-
mne/decoding/tests/test_csp.py | 14 +-
mne/decoding/tests/test_ems.py | 58 +
mne/decoding/tests/test_time_gen.py | 44 +
mne/decoding/time_gen.py | 123 +
mne/dipole.py | 2 +-
mne/epochs.py | 738 ++++-
mne/event.py | 88 +-
mne/{fiff => }/evoked.py | 650 +++-
mne/externals/FieldTrip.py | 508 +++
mne/externals/__init__.py | 4 +
mne/externals/decorator.py | 253 ++
mne/externals/jdcal.py | 116 +
mne/externals/six.py | 577 ++++
mne/externals/tempita/__init__.py | 1303 ++++++++
mne/externals/tempita/_looper.py | 163 +
mne/externals/tempita/compat3.py | 45 +
mne/fiff/__init__.py | 90 +-
mne/fiff/brainvision/brainvision.py | 529 ---
mne/fiff/brainvision/tests/test_brainvision.py | 75 -
mne/fiff/bti/__init__.py | 5 -
mne/fiff/channels.py | 35 -
mne/fiff/cov.py | 182 -
mne/fiff/edf/tests/test_edf.py | 92 -
mne/fiff/tests/test_evoked.py | 207 --
mne/filter.py | 138 +-
mne/fixes.py | 74 +-
mne/forward/__init__.py | 4 +-
mne/forward/_compute_forward.py | 31 +-
mne/forward/_field_interpolation.py | 286 ++
mne/forward/_lead_dots.py | 309 ++
mne/forward/_make_forward.py | 74 +-
mne/forward/forward.py | 154 +-
mne/forward/tests/test_field_interpolation.py | 153 +
mne/forward/tests/test_forward.py | 41 +-
mne/forward/tests/test_make_forward.py | 47 +-
mne/gui/__init__.py | 8 +-
mne/gui/_coreg_gui.py | 117 +-
mne/gui/_fiducials_gui.py | 9 +-
mne/gui/_file_traits.py | 226 +-
mne/gui/_kit2fiff_gui.py | 66 +-
mne/gui/_marker_gui.py | 17 +-
mne/gui/_viewer.py | 3 +-
mne/gui/tests/test_coreg_gui.py | 16 +-
mne/gui/tests/test_file_traits.py | 11 +-
mne/gui/tests/test_kit2fiff_gui.py | 31 +-
mne/gui/tests/test_marker_gui.py | 33 +-
mne/html/bootstrap.min.css | 7 +
mne/html/bootstrap.min.js | 7 +
mne/html/d3.v3.min.js | 5 +
mne/html/jquery-1.10.2.min.js | 6 +
mne/html/jquery-ui.min.css | 6 +
mne/html/jquery-ui.min.js | 12 +
mne/html/mpld3.v0.2.min.js | 2 +
mne/inverse_sparse/__init__.py | 2 +-
mne/inverse_sparse/_gamma_map.py | 10 +-
mne/inverse_sparse/mxne_debiasing.py | 4 +-
mne/inverse_sparse/mxne_inverse.py | 4 +-
mne/inverse_sparse/mxne_optim.py | 41 +-
mne/inverse_sparse/tests/test_gamma_map.py | 8 +-
mne/inverse_sparse/tests/test_mxne_debiasing.py | 2 +-
mne/inverse_sparse/tests/test_mxne_inverse.py | 9 +-
mne/inverse_sparse/tests/test_mxne_optim.py | 6 +-
mne/io/__init__.py | 33 +
mne/io/array/__init__.py | 5 +
mne/io/array/array.py | 65 +
mne/{fiff/bti => io/array}/tests/__init__.py | 0
mne/io/array/tests/test_array.py | 104 +
mne/{fiff/raw.py => io/base.py} | 873 ++---
mne/{fiff => io}/brainvision/__init__.py | 0
mne/io/brainvision/brainvision.py | 684 ++++
mne/{fiff => io}/brainvision/tests/__init__.py | 0
mne/{fiff => io}/brainvision/tests/data/test.eeg | Bin
mne/{fiff => io}/brainvision/tests/data/test.vhdr | 0
mne/{fiff => io}/brainvision/tests/data/test.vmrk | 0
.../brainvision/tests/data/test_bin_raw.fif | Bin
.../brainvision/tests/data/test_elp.txt | 0
mne/io/brainvision/tests/test_brainvision.py | 157 +
mne/io/bti/__init__.py | 5 +
mne/{fiff/bti/raw.py => io/bti/bti.py} | 829 ++---
mne/{fiff => io}/bti/constants.py | 4 +-
mne/{fiff => io}/bti/read.py | 10 +-
mne/{fiff/edf => io/bti}/tests/__init__.py | 0
.../bti/tests/data/exported4D_linux_raw.fif} | Bin
.../bti/tests/data/exported4D_solaris_raw.fif} | Bin
mne/{fiff => io}/bti/tests/data/test_config_linux | Bin
.../bti/tests/data/test_config_solaris | Bin
mne/{fiff => io}/bti/tests/data/test_hs_linux | Bin
mne/{fiff => io}/bti/tests/data/test_hs_solaris | Bin
mne/{fiff => io}/bti/tests/data/test_pdf_linux | Bin
mne/{fiff => io}/bti/tests/data/test_pdf_solaris | Bin
mne/{fiff => io}/bti/tests/test_bti.py | 38 +-
mne/{fiff => io}/bti/transforms.py | 2 +-
mne/{fiff => io}/compensator.py | 0
mne/{fiff => io}/constants.py | 22 +-
mne/{fiff => io}/ctf.py | 5 +-
mne/{fiff => io}/diff.py | 2 +-
mne/{fiff => io}/edf/__init__.py | 0
mne/{fiff => io}/edf/edf.py | 218 +-
mne/{fiff/bti => io/edf}/tests/__init__.py | 0
mne/{fiff => io}/edf/tests/data/biosemi.hpts | 0
mne/{fiff => io}/edf/tests/data/test.bdf | 0
mne/{fiff => io}/edf/tests/data/test.edf | 14 +-
.../edf/tests/data/test_bdf_eeglab.mat | Bin
.../edf/tests/data/test_edf_eeglab.mat | Bin
mne/{fiff => io}/edf/tests/data/test_eeglab.mat | Bin
mne/io/edf/tests/test_edf.py | 196 ++
mne/io/egi/__init__.py | 5 +
mne/io/egi/egi.py | 322 ++
mne/{fiff/bti => io/egi}/tests/__init__.py | 0
mne/io/egi/tests/data/test_egi.raw | Bin 0 -> 80756 bytes
mne/io/egi/tests/test_egi.py | 80 +
mne/io/fiff/__init__.py | 1 +
mne/io/fiff/raw.py | 598 ++++
mne/{fiff/bti => io/fiff}/tests/__init__.py | 0
mne/{ => io}/fiff/tests/test_raw.py | 230 +-
mne/{fiff => io}/kit/__init__.py | 3 +-
mne/{fiff => io}/kit/constants.py | 0
mne/{fiff => io}/kit/coreg.py | 47 +-
mne/{fiff => io}/kit/kit.py | 90 +-
mne/{fiff => io}/kit/tests/__init__.py | 0
mne/{fiff => io}/kit/tests/data/sns.txt | 0
mne/{fiff => io}/kit/tests/data/test.sqd | Bin
mne/{fiff => io}/kit/tests/data/test_Ykgw.mat | Bin
.../kit/tests/data/test_bin_raw.fif} | Bin
mne/{fiff => io}/kit/tests/data/test_elp.txt | 0
mne/{fiff => io}/kit/tests/data/test_hsp.txt | 0
mne/{fiff => io}/kit/tests/data/test_mrk.sqd | Bin
mne/{fiff => io}/kit/tests/data/test_mrk_post.sqd | Bin
mne/{fiff => io}/kit/tests/data/test_mrk_pre.sqd | Bin
mne/{fiff => io}/kit/tests/data/trans-sample.fif | Bin
mne/{fiff => io}/kit/tests/test_coreg.py | 9 +-
mne/{fiff => io}/kit/tests/test_kit.py | 40 +-
mne/{fiff => io}/matrix.py | 2 +-
mne/{fiff => io}/meas_info.py | 408 ++-
mne/{fiff => io}/open.py | 47 +-
mne/{fiff => io}/pick.py | 30 +-
mne/{fiff => io}/proj.py | 73 +-
mne/{fiff => io}/tag.py | 55 +-
mne/{fiff => io}/tests/__init__.py | 0
.../tests/data/fsaverage-fiducials.fif | Bin
mne/{fiff => io}/tests/data/process_raw.sh | 0
.../tests/data/sample-audvis-raw-trans.txt | 0
mne/io/tests/data/small-src.fif.gz | Bin 0 -> 77784 bytes
.../tests/data/test-1-eve.fif} | Bin
mne/{fiff => io}/tests/data/test-ave-2.log | 0
mne/{fiff => io}/tests/data/test-ave.fif | Bin
mne/{fiff => io}/tests/data/test-ave.fif.gz | Bin
mne/{fiff => io}/tests/data/test-ave.log | 0
mne/{fiff => io}/tests/data/test-cov.fif | Bin
mne/{fiff => io}/tests/data/test-cov.fif.gz | Bin
mne/{fiff => io}/tests/data/test-eve-1.eve | 0
mne/{fiff => io}/tests/data/test-eve-old-style.eve | 0
mne/{fiff => io}/tests/data/test-eve.eve | 0
mne/{fiff => io}/tests/data/test-eve.fif | Bin
mne/{fiff => io}/tests/data/test-eve.fif.gz | Bin
mne/{fiff => io}/tests/data/test-km-cov.fif | Bin
mne/{fiff => io}/tests/data/test-lh.label | 0
mne/{fiff => io}/tests/data/test-mpr-eve.eve | 0
mne/{fiff => io}/tests/data/test-nf-ave.fif | Bin
mne/{fiff => io}/tests/data/test-no-reject.ave | 0
.../test_proj.fif => io/tests/data/test-proj.fif} | Bin
.../tests/data/test-proj.fif.gz} | Bin
mne/{fiff => io}/tests/data/test-rh.label | 0
mne/{fiff => io}/tests/data/test.ave | 0
mne/{fiff => io}/tests/data/test.cov | 0
mne/{fiff => io}/tests/data/test_bads.txt | 0
mne/{fiff => io}/tests/data/test_chpi_raw_hp.txt | 0
mne/{fiff => io}/tests/data/test_chpi_raw_sss.fif | Bin
mne/{fiff => io}/tests/data/test_ctf_comp_raw.fif | Bin
mne/{fiff => io}/tests/data/test_ctf_raw.fif | Bin
mne/{fiff => io}/tests/data/test_empty_room.cov | 0
mne/{fiff => io}/tests/data/test_erm-cov.fif | Bin
mne/{fiff => io}/tests/data/test_ica.lout | 0
mne/{fiff => io}/tests/data/test_keepmean.cov | 0
mne/{fiff => io}/tests/data/test_raw-eve.fif | Bin
mne/{fiff => io}/tests/data/test_raw.fif | Bin
mne/{fiff => io}/tests/data/test_raw.fif.gz | Bin
mne/{fiff => io}/tests/data/test_raw.lout | 0
mne/{fiff => io}/tests/data/test_withbads_raw.fif | Bin
mne/{fiff => io}/tests/data/test_wrong_bads.txt | 0
mne/{fiff => io}/tests/test_compensator.py | 12 +-
mne/{fiff => io}/tests/test_meas_info.py | 26 +-
mne/{fiff => io}/tests/test_pick.py | 2 +-
mne/{fiff => io}/tree.py | 17 +-
mne/{fiff => io}/write.py | 50 +-
mne/label.py | 1098 +++++--
mne/layouts/EEG1005.lay | 337 ++
mne/layouts/EGI256.lout | 259 ++
mne/layouts/KIT-157.lout | 158 +
mne/layouts/layout.py | 97 +-
mne/layouts/tests/test_layout.py | 56 +-
mne/minimum_norm/__init__.py | 3 +-
mne/minimum_norm/inverse.py | 141 +-
mne/minimum_norm/psf_ctf.py | 431 +++
mne/minimum_norm/tests/test_inverse.py | 38 +-
mne/minimum_norm/tests/test_psf_ctf.py | 79 +
mne/minimum_norm/tests/test_time_frequency.py | 18 +-
mne/minimum_norm/time_frequency.py | 44 +-
mne/misc.py | 2 +-
mne/parallel.py | 22 +-
mne/preprocessing/__init__.py | 9 +-
mne/preprocessing/bads.py | 36 +
mne/preprocessing/ctps_.py | 169 +
mne/preprocessing/ecg.py | 159 +-
mne/preprocessing/eog.py | 137 +-
mne/preprocessing/ica.py | 1741 ++++++----
mne/preprocessing/infomax_.py | 276 ++
mne/preprocessing/maxfilter.py | 11 +-
mne/preprocessing/ssp.py | 19 +-
mne/preprocessing/stim.py | 4 +-
mne/preprocessing/tests/test_ctps.py | 84 +
mne/preprocessing/tests/test_ecg.py | 13 +-
mne/preprocessing/tests/test_eog.py | 6 +-
mne/preprocessing/tests/test_ica.py | 385 ++-
mne/preprocessing/tests/test_infomax.py | 136 +
mne/preprocessing/tests/test_ssp.py | 8 +-
mne/preprocessing/tests/test_stim.py | 4 +-
mne/proj.py | 41 +-
mne/realtime/__init__.py | 1 +
mne/realtime/client.py | 19 +-
mne/realtime/epochs.py | 25 +-
mne/realtime/fieldtrip_client.py | 296 ++
mne/realtime/mockclient.py | 10 +-
mne/realtime/stim_server_client.py | 36 +-
mne/realtime/tests/test_fieldtrip_client.py | 68 +
mne/realtime/tests/test_mockclient.py | 14 +-
mne/realtime/tests/test_stim_client_server.py | 28 +-
mne/report.py | 1287 ++++++++
mne/selection.py | 5 +-
mne/simulation/evoked.py | 4 +-
mne/simulation/source.py | 8 +-
mne/simulation/tests/test_evoked.py | 27 +-
mne/source_estimate.py | 285 +-
mne/source_space.py | 237 +-
mne/stats/__init__.py | 1 +
mne/stats/cluster_level.py | 59 +-
mne/stats/multi_comp.py | 2 +-
mne/stats/parametric.py | 49 +-
mne/stats/permutations.py | 4 +-
mne/stats/regression.py | 135 +
mne/stats/tests/test_cluster_level.py | 35 +-
mne/stats/tests/test_regression.py | 67 +
mne/surface.py | 160 +-
mne/tests/test_channels.py | 109 +
mne/tests/test_coreg.py | 18 +-
mne/tests/test_cov.py | 53 +-
mne/tests/test_epochs.py | 502 ++-
mne/tests/test_event.py | 75 +-
mne/tests/test_evoked.py | 384 +++
mne/tests/test_filter.py | 34 +-
mne/tests/test_fixes.py | 21 +-
mne/tests/test_hdf5.py | 26 +
mne/tests/test_label.py | 340 +-
mne/tests/test_misc.py | 2 +-
mne/tests/test_proj.py | 49 +-
mne/tests/test_report.py | 119 +
mne/tests/test_source_estimate.py | 167 +-
mne/tests/test_source_space.py | 195 +-
mne/tests/test_surface.py | 40 +-
mne/tests/test_transforms.py | 33 +-
mne/tests/test_utils.py | 177 +-
mne/tests/test_viz.py | 511 ---
mne/time_frequency/__init__.py | 2 +-
mne/time_frequency/ar.py | 6 +-
mne/time_frequency/csd.py | 2 +-
mne/time_frequency/multitaper.py | 24 +-
mne/time_frequency/psd.py | 64 +-
mne/time_frequency/stft.py | 12 +-
mne/time_frequency/tests/test_ar.py | 12 +-
mne/time_frequency/tests/test_csd.py | 14 +-
mne/time_frequency/tests/test_multitaper.py | 16 +-
mne/time_frequency/tests/test_psd.py | 22 +-
mne/time_frequency/tests/test_stft.py | 2 +-
mne/time_frequency/tests/test_tfr.py | 72 +-
mne/time_frequency/tfr.py | 521 ++-
mne/transforms.py | 190 +-
mne/utils.py | 580 +++-
mne/viz.py | 3460 --------------------
mne/viz/_3d.py | 651 ++++
mne/viz/__init__.py | 20 +
mne/viz/circle.py | 408 +++
mne/viz/epochs.py | 451 +++
mne/viz/evoked.py | 296 ++
mne/viz/ica.py | 484 +++
mne/viz/misc.py | 521 +++
mne/viz/raw.py | 610 ++++
mne/{fiff/bti => viz}/tests/__init__.py | 0
.../bti/tests/__init__.py => viz/tests/__init__py} | 0
mne/viz/tests/test_3d.py | 115 +
mne/viz/tests/test_circle.py | 94 +
mne/viz/tests/test_epochs.py | 117 +
mne/viz/tests/test_evoked.py | 106 +
mne/viz/tests/test_ica.py | 140 +
mne/viz/tests/test_misc.py | 114 +
mne/viz/tests/test_raw.py | 107 +
mne/viz/tests/test_topo.py | 119 +
mne/viz/tests/test_topomap.py | 131 +
mne/viz/tests/test_utils.py | 28 +
mne/viz/topo.py | 725 ++++
mne/viz/topomap.py | 1035 ++++++
mne/viz/utils.py | 364 ++
setup.cfg | 13 +-
setup.py | 42 +-
475 files changed, 31733 insertions(+), 11032 deletions(-)
--
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/python-mne.git
More information about the debian-med-commit
mailing list