[med-svn] [igraph] 29/31: Merge tag 'upstream/0.7.1'
Andreas Tille
tille at debian.org
Tue Aug 19 10:16:54 UTC 2014
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository igraph.
commit 1b41985f7f44595b83184866932bbf8205166d76
Merge: 850baaf b4326a0
Author: Andreas Tille <tille at debian.org>
Date: Tue Aug 19 11:52:22 2014 +0200
Merge tag 'upstream/0.7.1'
Upstream version 0.7.1
AUTHORS | 2 +
COPYING | 340 +
ChangeLog | 0
INSTALL | 370 +
Makefile.am | 93 +
Makefile.in | 973 +
NEWS | 1435 ++
README | 13 +
TODO | 57 +
VERSION | 1 +
aclocal.m4 | 9754 ++++++++
compile | 347 +
config.guess | 1558 ++
config.h.in | 178 +
config.sub | 1788 ++
configure | 20717 ++++++++++++++++
configure.ac | 334 +
debian/changelog | 71 -
debian/compat | 1 -
debian/control | 46 -
debian/copyright | 17 -
debian/libigraph-dev.examples | 2 -
debian/libigraph-dev.info | 1 -
debian/libigraph.manpages | 1 -
debian/libigraph0-dev.install | 3 -
debian/libigraph0.install | 1 -
debian/patches/link_f2c.patch | 17 -
debian/patches/series | 1 -
debian/rules | 23 -
debian/source/format | 1 -
debian/watch | 5 -
depcomp | 791 +
doc/Makefile.in | 690 +
doc/igraph.3 | 46 +
examples/benchmarks/bench.h | 53 +
examples/benchmarks/igraph_maximal_cliques.c | 61 +
examples/benchmarks/igraph_transitivity.c | 59 +
examples/simple/2wheap.c | 142 +
examples/simple/LINKS.NET | 15 +
examples/simple/VF2-compat.c | 206 +
examples/simple/adjlist.c | 64 +
examples/simple/ak-4102.max | 24623 +++++++++++++++++++
examples/simple/assortativity.c | 212 +
examples/simple/assortativity.out | 10 +
examples/simple/bellman_ford.c | 103 +
examples/simple/bellman_ford.out | 16 +
examples/simple/biguint.c | 87 +
examples/simple/biguint.out | 2 +
examples/simple/biguint_betweenness.c | 205 +
examples/simple/bipartite.net | 26 +
examples/simple/blas.c | 49 +
examples/simple/blas.out | 1 +
examples/simple/bug-1033045.c | 50 +
examples/simple/bug-1033045.out | 9 +
examples/simple/bug-1149658.c | 45 +
examples/simple/cattributes.c | 397 +
examples/simple/cattributes.out | 84 +
examples/simple/cattributes2.c | 60 +
examples/simple/cattributes2.out | 283 +
examples/simple/cattributes3.c | 158 +
examples/simple/cattributes3.out | 243 +
examples/simple/cattributes4.c | 90 +
examples/simple/cattributes4.out | 81 +
examples/simple/celegansneural.gml | 15644 ++++++++++++
examples/simple/centralization.c | 173 +
examples/simple/cohesive_blocks.c | 174 +
examples/simple/cohesive_blocks.out | 66 +
examples/simple/d_indheap.c | 100 +
examples/simple/d_indheap.out | 12 +
examples/simple/dijkstra.c | 68 +
examples/simple/dijkstra.out | 10 +
examples/simple/dominator_tree.c | 165 +
examples/simple/dominator_tree.out | 49 +
examples/simple/dot.c | 52 +
examples/simple/dot.out | 196 +
examples/simple/dqueue.c | 117 +
examples/simple/dqueue.out | 2 +
examples/simple/edgelist1.dl | 10 +
examples/simple/edgelist2.dl | 9 +
examples/simple/edgelist3.dl | 11 +
examples/simple/edgelist4.dl | 12 +
examples/simple/edgelist5.dl | 9 +
examples/simple/edgelist6.dl | 11 +
examples/simple/eigenvector_centrality.c | 85 +
examples/simple/eigenvector_centrality.out | 3 +
examples/simple/even_tarjan.c | 66 +
examples/simple/flow.c | 120 +
examples/simple/flow2.c | 240 +
examples/simple/flow2.out | 10 +
examples/simple/foreign.c | 46 +
examples/simple/foreign.out | 11 +
examples/simple/fullmatrix1.dl | 9 +
examples/simple/fullmatrix2.dl | 10 +
examples/simple/fullmatrix3.dl | 12 +
examples/simple/fullmatrix4.dl | 10 +
examples/simple/gml.c | 52 +
examples/simple/gml.out | 612 +
examples/simple/graphml-hsa05010.xml | 379 +
examples/simple/graphml.c | 98 +
examples/simple/graphml.out | 24 +
examples/simple/heap.c | 31 +
examples/simple/igraph_add_edges.c | 92 +
examples/simple/igraph_add_edges.out | 3 +
examples/simple/igraph_add_vertices.c | 63 +
examples/simple/igraph_adjacency.c | 29 +
examples/simple/igraph_all_st_cuts.c | 375 +
examples/simple/igraph_all_st_cuts.out | 67 +
examples/simple/igraph_all_st_mincuts.c | 104 +
examples/simple/igraph_all_st_mincuts.out | 24 +
examples/simple/igraph_are_connected.c | 108 +
examples/simple/igraph_arpack_rnsolve.c | 130 +
examples/simple/igraph_arpack_rnsolve.out | 61 +
examples/simple/igraph_array.c | 85 +
examples/simple/igraph_array.out | 37 +
examples/simple/igraph_atlas.c | 58 +
examples/simple/igraph_atlas.out | 31 +
examples/simple/igraph_average_path_length.c | 40 +
examples/simple/igraph_barabasi_game.c | 118 +
examples/simple/igraph_barabasi_game2.c | 92 +
examples/simple/igraph_betweenness.c | 140 +
examples/simple/igraph_bfs.c | 61 +
examples/simple/igraph_bfs.out | 6 +
examples/simple/igraph_bfs2.c | 128 +
examples/simple/igraph_bfs2.out | 12 +
examples/simple/igraph_biconnected_components.c | 79 +
examples/simple/igraph_biconnected_components.out | 6 +
examples/simple/igraph_bipartite_create.c | 64 +
examples/simple/igraph_bipartite_create.out | 8 +
examples/simple/igraph_bipartite_projection.c | 173 +
examples/simple/igraph_cliques.c | 85 +
examples/simple/igraph_cliques.out | 50 +
examples/simple/igraph_cocitation.c | 56 +
examples/simple/igraph_cocitation.out | 8 +
.../simple/igraph_community_edge_betweenness.c | 166 +
.../simple/igraph_community_edge_betweenness.out | 3 +
examples/simple/igraph_community_fastgreedy.c | 147 +
examples/simple/igraph_community_fastgreedy.out | 20 +
examples/simple/igraph_community_infomap.c | 258 +
examples/simple/igraph_community_infomap.out | 22 +
.../simple/igraph_community_label_propagation.c | 100 +
.../simple/igraph_community_label_propagation.out | 0
.../simple/igraph_community_leading_eigenvector.c | 112 +
.../igraph_community_leading_eigenvector.out | 7 +
.../simple/igraph_community_leading_eigenvector2.c | 116 +
.../igraph_community_leading_eigenvector2.out | 7 +
examples/simple/igraph_community_multilevel.c | 107 +
examples/simple/igraph_community_multilevel.out | 10 +
.../simple/igraph_community_optimal_modularity.c | 99 +
examples/simple/igraph_complementer.c | 109 +
examples/simple/igraph_complementer.out | 87 +
examples/simple/igraph_complex.c | 183 +
examples/simple/igraph_compose.c | 117 +
examples/simple/igraph_compose.out | 11 +
examples/simple/igraph_convergence_degree.c | 51 +
examples/simple/igraph_convergence_degree.out | 2 +
examples/simple/igraph_convex_hull.c | 62 +
examples/simple/igraph_convex_hull.out | 2 +
examples/simple/igraph_copy.c | 52 +
examples/simple/igraph_create.c | 84 +
examples/simple/igraph_decompose.c | 103 +
examples/simple/igraph_decompose.out | 18 +
examples/simple/igraph_degree.c | 210 +
examples/simple/igraph_degree.out | 13 +
examples/simple/igraph_degree_sequence_game.c | 98 +
examples/simple/igraph_degree_sequence_game.out | 7 +
examples/simple/igraph_delete_edges.c | 84 +
examples/simple/igraph_delete_vertices.c | 74 +
examples/simple/igraph_density.c | 133 +
examples/simple/igraph_density.out | 29 +
.../igraph_deterministic_optimal_imitation.c | 244 +
examples/simple/igraph_diameter.c | 61 +
examples/simple/igraph_diameter.out | 2 +
examples/simple/igraph_difference.c | 121 +
examples/simple/igraph_difference.out | 16 +
examples/simple/igraph_disjoint_union.c | 95 +
examples/simple/igraph_disjoint_union.out | 2 +
examples/simple/igraph_eccentricity.c | 52 +
examples/simple/igraph_eccentricity.out | 3 +
examples/simple/igraph_edge_betweenness.c | 84 +
examples/simple/igraph_edge_betweenness.out | 97 +
examples/simple/igraph_eigen_matrix.c | 124 +
examples/simple/igraph_eigen_matrix.out | 11 +
examples/simple/igraph_eigen_matrix2.c | 107 +
examples/simple/igraph_eigen_matrix2.out | 11 +
examples/simple/igraph_eigen_matrix3.c | 89 +
examples/simple/igraph_eigen_matrix3.out | 0
examples/simple/igraph_eigen_matrix4.c | 92 +
examples/simple/igraph_eigen_matrix4.out | 2 +
examples/simple/igraph_eigen_matrix_symmetric.c | 122 +
examples/simple/igraph_eigen_matrix_symmetric.out | 4 +
.../simple/igraph_eigen_matrix_symmetric_arpack.c | 123 +
.../igraph_eigen_matrix_symmetric_arpack.out | 4 +
examples/simple/igraph_empty.c | 79 +
examples/simple/igraph_erdos_renyi_game.c | 214 +
examples/simple/igraph_es_adj.c | 126 +
examples/simple/igraph_es_adj.out | 38 +
examples/simple/igraph_es_fromto.c | 74 +
examples/simple/igraph_es_fromto.out | 3 +
examples/simple/igraph_es_pairs.c | 78 +
examples/simple/igraph_es_path.c | 73 +
examples/simple/igraph_feedback_arc_set.c | 74 +
examples/simple/igraph_feedback_arc_set.out | 3 +
examples/simple/igraph_feedback_arc_set_ip.c | 92 +
examples/simple/igraph_feedback_arc_set_ip.out | 4 +
examples/simple/igraph_fisher_yates_shuffle.c | 106 +
examples/simple/igraph_full.c | 29 +
.../igraph_get_all_shortest_paths_dijkstra.c | 173 +
.../igraph_get_all_shortest_paths_dijkstra.out | 19 +
examples/simple/igraph_get_eid.c | 160 +
examples/simple/igraph_get_eid.out | 2 +
examples/simple/igraph_get_eids.c | 216 +
examples/simple/igraph_get_eids.out | 3 +
examples/simple/igraph_get_shortest_paths.c | 121 +
examples/simple/igraph_get_shortest_paths.out | 7 +
examples/simple/igraph_get_shortest_paths2.c | 84 +
examples/simple/igraph_get_shortest_paths2.out | 16 +
.../simple/igraph_get_shortest_paths_dijkstra.c | 214 +
.../simple/igraph_get_shortest_paths_dijkstra.out | 15 +
examples/simple/igraph_girth.c | 42 +
examples/simple/igraph_gomory_hu_tree.c | 141 +
examples/simple/igraph_grg_game.c | 75 +
examples/simple/igraph_growing_random_game.c | 29 +
examples/simple/igraph_has_multiple.c | 86 +
examples/simple/igraph_hashtable.c | 131 +
examples/simple/igraph_hashtable.out | 14 +
examples/simple/igraph_hrg.c | 73 +
examples/simple/igraph_hrg2.c | 81 +
examples/simple/igraph_hrg2.out | 2 +
examples/simple/igraph_hrg3.c | 81 +
examples/simple/igraph_hrg3.out | 2 +
examples/simple/igraph_i_cutheap.c | 62 +
examples/simple/igraph_i_cutheap.out | 1 +
examples/simple/igraph_i_layout_sphere.c | 86 +
examples/simple/igraph_independent_sets.c | 87 +
examples/simple/igraph_independent_sets.out | 36 +
examples/simple/igraph_induced_subgraph_map.c | 60 +
examples/simple/igraph_intersection.c | 124 +
examples/simple/igraph_intersection.out | 7 +
examples/simple/igraph_intersection2.c | 59 +
examples/simple/igraph_intersection2.out | 21 +
examples/simple/igraph_is_degree_sequence.c | 140 +
examples/simple/igraph_is_directed.c | 43 +
examples/simple/igraph_is_loop.c | 55 +
examples/simple/igraph_is_loop.out | 2 +
examples/simple/igraph_is_minimal_separator.c | 67 +
examples/simple/igraph_is_multiple.c | 56 +
examples/simple/igraph_is_multiple.out | 2 +
examples/simple/igraph_is_separator.c | 67 +
examples/simple/igraph_isomorphic_vf2.c | 283 +
examples/simple/igraph_k_regular_game.c | 174 +
examples/simple/igraph_k_regular_game.out | 16 +
examples/simple/igraph_knn.c | 42 +
examples/simple/igraph_lapack_dgeev.c | 234 +
examples/simple/igraph_lapack_dgeevx.c | 200 +
examples/simple/igraph_lapack_dgehrd.c | 74 +
examples/simple/igraph_lapack_dgehrd.out | 0
examples/simple/igraph_lapack_dgesv.c | 141 +
examples/simple/igraph_lapack_dgesv.out | 1 +
examples/simple/igraph_lapack_dsyevr.c | 189 +
examples/simple/igraph_laplacian.c | 236 +
examples/simple/igraph_laplacian.out | 80 +
examples/simple/igraph_lattice.c | 180 +
examples/simple/igraph_layout_grid.c | 68 +
examples/simple/igraph_layout_grid.out | 95 +
examples/simple/igraph_layout_lgl.c | 49 +
examples/simple/igraph_layout_mds.c | 85 +
examples/simple/igraph_layout_mds.out | 10 +
examples/simple/igraph_layout_merge.c | 83 +
examples/simple/igraph_layout_merge2.c | 78 +
examples/simple/igraph_layout_merge2.out | 13 +
examples/simple/igraph_layout_merge3.c | 44 +
examples/simple/igraph_layout_reingold_tilford.c | 47 +
examples/simple/igraph_layout_reingold_tilford.in | 44 +
examples/simple/igraph_layout_sugiyama.c | 97 +
examples/simple/igraph_layout_sugiyama.out | 87 +
examples/simple/igraph_lcf.c | 47 +
examples/simple/igraph_local_transitivity.c | 59 +
examples/simple/igraph_marked_queue.c | 62 +
examples/simple/igraph_maximal_cliques.c | 153 +
examples/simple/igraph_maximal_cliques.out | 22 +
examples/simple/igraph_maximal_cliques2.c | 98 +
examples/simple/igraph_maximal_cliques2.out | 12 +
examples/simple/igraph_maximal_cliques3.c | 79 +
examples/simple/igraph_maximal_cliques3.out | 28 +
examples/simple/igraph_maximal_cliques4.c | 102 +
examples/simple/igraph_maximal_cliques4.out | 30 +
.../simple/igraph_maximum_bipartite_matching.c | 249 +
examples/simple/igraph_mincut.c | 109 +
examples/simple/igraph_mincut.out | 12 +
examples/simple/igraph_minimal_separators.c | 58 +
examples/simple/igraph_minimum_size_separators.c | 166 +
examples/simple/igraph_minimum_size_separators.out | 30 +
examples/simple/igraph_minimum_spanning_tree.c | 70 +
examples/simple/igraph_minimum_spanning_tree.out | 34 +
examples/simple/igraph_moran_process.c | 221 +
examples/simple/igraph_motifs_randesu.c | 69 +
examples/simple/igraph_motifs_randesu.out | 9 +
examples/simple/igraph_neighbors.c | 74 +
examples/simple/igraph_neighbors.out | 3 +
examples/simple/igraph_pagerank.c | 239 +
examples/simple/igraph_pagerank.out | 16 +
examples/simple/igraph_power_law_fit.c | 304 +
examples/simple/igraph_power_law_fit.out | 42 +
examples/simple/igraph_preference_game.c | 131 +
examples/simple/igraph_psumtree.c | 197 +
examples/simple/igraph_qsort.c | 58 +
examples/simple/igraph_qsort.out | 1 +
examples/simple/igraph_qsort_r.c | 68 +
examples/simple/igraph_qsort_r.out | 1 +
examples/simple/igraph_radius.c | 48 +
examples/simple/igraph_random_sample.c | 224 +
examples/simple/igraph_read_graph_dl.c | 61 +
examples/simple/igraph_read_graph_dl.out | 100 +
examples/simple/igraph_read_graph_graphdb.c | 41 +
examples/simple/igraph_read_graph_graphdb.out | 1500 ++
examples/simple/igraph_read_graph_lgl-1.lgl | 7 +
examples/simple/igraph_read_graph_lgl-2.lgl | 7 +
examples/simple/igraph_read_graph_lgl-3.lgl | 4 +
examples/simple/igraph_read_graph_lgl.c | 80 +
examples/simple/igraph_read_graph_lgl.out | 12 +
examples/simple/igraph_reciprocity.c | 65 +
examples/simple/igraph_rewire.c | 51 +
examples/simple/igraph_rewire.out | 2 +
examples/simple/igraph_ring.c | 169 +
examples/simple/igraph_rng_get_exp.c | 36 +
examples/simple/igraph_rng_get_exp.out | 1000 +
examples/simple/igraph_roulette_wheel_imitation.c | 280 +
examples/simple/igraph_scg_grouping.c | 83 +
examples/simple/igraph_scg_grouping.out | 1 +
examples/simple/igraph_scg_grouping2.c | 79 +
examples/simple/igraph_scg_grouping2.out | 4 +
examples/simple/igraph_scg_grouping3.c | 120 +
examples/simple/igraph_scg_grouping3.out | 5 +
examples/simple/igraph_scg_grouping4.c | 99 +
examples/simple/igraph_scg_grouping4.out | 4 +
examples/simple/igraph_scg_semiprojectors.c | 112 +
examples/simple/igraph_scg_semiprojectors.out | 34 +
examples/simple/igraph_scg_semiprojectors2.c | 147 +
examples/simple/igraph_scg_semiprojectors2.out | 38 +
examples/simple/igraph_scg_semiprojectors3.c | 128 +
examples/simple/igraph_scg_semiprojectors3.out | 34 +
examples/simple/igraph_set.c | 84 +
examples/simple/igraph_set.out | 1 +
examples/simple/igraph_similarity.c | 210 +
examples/simple/igraph_similarity.out | 48 +
examples/simple/igraph_simplify.c | 92 +
examples/simple/igraph_simplify.out | 10 +
examples/simple/igraph_small.c | 35 +
examples/simple/igraph_small.out | 5 +
examples/simple/igraph_sparsemat.c | 162 +
examples/simple/igraph_sparsemat.out | 295 +
examples/simple/igraph_sparsemat2.c | 259 +
examples/simple/igraph_sparsemat2.out | 0
examples/simple/igraph_sparsemat3.c | 309 +
examples/simple/igraph_sparsemat3.out | 0
examples/simple/igraph_sparsemat4.c | 287 +
examples/simple/igraph_sparsemat4.out | 0
examples/simple/igraph_sparsemat5.c | 351 +
examples/simple/igraph_sparsemat5.out | 117 +
examples/simple/igraph_sparsemat6.c | 63 +
examples/simple/igraph_sparsemat7.c | 77 +
examples/simple/igraph_sparsemat8.c | 183 +
examples/simple/igraph_sparsemat9.c | 84 +
examples/simple/igraph_sparsemat_is_symmetric.c | 62 +
examples/simple/igraph_star.c | 29 +
examples/simple/igraph_stochastic_imitation.c | 240 +
examples/simple/igraph_strvector.c | 190 +
examples/simple/igraph_strvector.out | 64 +
examples/simple/igraph_subisomorphic_lad.c | 140 +
examples/simple/igraph_subisomorphic_lad.out | 30 +
examples/simple/igraph_to_undirected.c | 52 +
examples/simple/igraph_to_undirected.out | 48 +
examples/simple/igraph_topological_sorting.c | 97 +
examples/simple/igraph_topological_sorting.out | 4 +
examples/simple/igraph_transitive_closure_dag.c | 50 +
examples/simple/igraph_transitive_closure_dag.out | 2 +
examples/simple/igraph_transitivity.c | 94 +
examples/simple/igraph_tree.c | 29 +
examples/simple/igraph_trie.c | 98 +
examples/simple/igraph_trie.out | 38 +
examples/simple/igraph_union.c | 152 +
examples/simple/igraph_union.out | 69 +
examples/simple/igraph_version.c | 45 +
examples/simple/igraph_vs_nonadj.c | 65 +
examples/simple/igraph_vs_nonadj.out | 2 +
examples/simple/igraph_vs_seq.c | 50 +
examples/simple/igraph_vs_seq.out | 1 +
examples/simple/igraph_vs_vector.c | 82 +
examples/simple/igraph_vs_vector.out | 1 +
examples/simple/igraph_weighted_adjacency.c | 108 +
examples/simple/igraph_weighted_adjacency.out | 30 +
examples/simple/igraph_write_graph_leda.c | 102 +
examples/simple/igraph_write_graph_leda.out | 133 +
examples/simple/igraph_write_graph_lgl.c | 48 +
examples/simple/igraph_write_graph_pajek.c | 75 +
examples/simple/igraph_write_graph_pajek.out | 56 +
examples/simple/indheap.c | 31 +
examples/simple/input.dl | 104 +
examples/simple/iso_b03_m1000.A00 | Bin 0 -> 5002 bytes
examples/simple/karate.gml | 530 +
examples/simple/levc-stress.c | 66 +
examples/simple/lineendings.c | 71 +
examples/simple/lineendings.out | 44 +
examples/simple/matrix.c | 173 +
examples/simple/matrix.out | 37 +
examples/simple/matrix2.c | 316 +
examples/simple/matrix2.out | 167 +
examples/simple/matrix3.c | 43 +
examples/simple/mt.c | 39 +
examples/simple/nodelist1.dl | 9 +
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examples/simple/pajek.c | 47 +
examples/simple/pajek1.net | 21 +
examples/simple/pajek2.c | 50 +
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examples/simple/pajek2.out | 1 +
examples/simple/pajek3.net | 21 +
examples/simple/pajek4.net | 22 +
examples/simple/pajek5.net | 21 +
examples/simple/pajek6.net | 21 +
examples/simple/pajek_bip.net | 27 +
examples/simple/pajek_bip2.net | 27 +
examples/simple/pajek_bipartite.c | 43 +
examples/simple/pajek_bipartite.out | 22 +
examples/simple/pajek_bipartite2.c | 120 +
examples/simple/pajek_bipartite2.out | 81 +
examples/simple/pajek_signed.c | 100 +
examples/simple/pajek_signed.net | 23 +
examples/simple/pajek_signed.out | 55 +
examples/simple/random_seed.c | 52 +
examples/simple/scg.c | 160 +
examples/simple/scg.out | 300 +
examples/simple/scg2.c | 126 +
examples/simple/scg2.out | 166 +
examples/simple/scg3.c | 124 +
examples/simple/scg3.out | 177 +
examples/simple/single_target_shortest_path.c | 78 +
examples/simple/single_target_shortest_path.out | 10 +
examples/simple/spinglass.c | 99 +
examples/simple/spmatrix.c | 211 +
examples/simple/spmatrix.out | 52 +
examples/simple/stack.c | 93 +
examples/simple/test.gxl | 50 +
examples/simple/tls1.c | 53 +
examples/simple/tls2.c | 230 +
examples/simple/tls2.out | 23 +
examples/simple/topology.c | 63 +
examples/simple/topology.out | 4 +
examples/simple/vector.c | 341 +
examples/simple/vector.out | 26 +
examples/simple/vector2.c | 125 +
examples/simple/vector2.out | 16 +
examples/simple/vector3.c | 46 +
examples/simple/vector_ptr.c | 277 +
examples/simple/walktrap.c | 70 +
examples/simple/walktrap.out | 10 +
examples/simple/watts_strogatz_game.c | 112 +
examples/simple/wikti_en_V_syn.elist | 8293 +++++++
igraph.pc | 12 +
igraph.pc.in | 12 +
igraph_Info.plist.in | 22 +
include/igraph.h | 97 +
include/igraph_adjlist.h | 238 +
include/igraph_arpack.h | 341 +
include/igraph_array.h | 69 +
include/igraph_array_pmt.h | 51 +
include/igraph_attributes.h | 878 +
include/igraph_bipartite.h | 106 +
include/igraph_blas.h | 72 +
include/igraph_centrality.h | 221 +
include/igraph_cliques.h | 82 +
include/igraph_cocitation.h | 75 +
include/igraph_cohesive_blocks.h | 37 +
include/igraph_community.h | 241 +
include/igraph_complex.h | 111 +
include/igraph_components.h | 69 +
include/igraph_constants.h | 159 +
include/igraph_constructors.h | 85 +
include/igraph_conversion.h | 74 +
include/igraph_datatype.h | 92 +
include/igraph_dqueue.h | 76 +
include/igraph_dqueue_pmt.h | 49 +
include/igraph_eigen.h | 118 +
include/igraph_epidemics.h | 75 +
include/igraph_error.h | 721 +
include/igraph_flow.h | 178 +
include/igraph_foreign.h | 94 +
include/igraph_games.h | 194 +
include/igraph_graphlets.h | 71 +
include/igraph_heap.h | 91 +
include/igraph_heap_pmt.h | 45 +
include/igraph_hrg.h | 123 +
include/igraph_interface.h | 95 +
include/igraph_interrupt.h | 138 +
include/igraph_iterators.h | 410 +
include/igraph_lapack.h | 118 +
include/igraph_layout.h | 253 +
include/igraph_matching.h | 65 +
include/igraph_matrix.h | 107 +
include/igraph_matrix_pmt.h | 234 +
include/igraph_memory.h | 55 +
include/igraph_microscopic_update.h | 69 +
include/igraph_mixing.h | 60 +
include/igraph_motifs.h | 104 +
include/igraph_neighborhood.h | 51 +
include/igraph_nongraph.h | 102 +
include/igraph_operators.h | 72 +
include/igraph_paths.h | 135 +
include/igraph_pmt.h | 142 +
include/igraph_pmt_off.h | 158 +
include/igraph_progress.h | 193 +
include/igraph_psumtree.h | 58 +
include/igraph_qsort.h | 46 +
include/igraph_random.h | 129 +
include/igraph_revolver.h | 1200 +
include/igraph_scg.h | 135 +
include/igraph_separators.h | 62 +
include/igraph_sparsemat.h | 264 +
include/igraph_spmatrix.h | 123 +
include/igraph_stack.h | 82 +
include/igraph_stack_pmt.h | 47 +
include/igraph_statusbar.h | 135 +
include/igraph_structural.h | 157 +
include/igraph_strvector.h | 106 +
include/igraph_threading.h | 51 +
include/igraph_threading.h.in | 51 +
include/igraph_topology.h | 290 +
include/igraph_transitivity.h | 73 +
include/igraph_types.h | 99 +
include/igraph_vector.h | 174 +
include/igraph_vector_pmt.h | 265 +
include/igraph_vector_ptr.h | 109 +
include/igraph_vector_type.h | 34 +
include/igraph_version.h | 36 +
include/igraph_version.h.in | 36 +
include/igraph_visitor.h | 141 +
install-sh | 527 +
ltmain.sh | 9655 ++++++++
missing | 215 +
optional/glpk/amd/amd.h | 67 +
optional/glpk/amd/amd_1.c | 181 +
optional/glpk/amd/amd_2.c | 1844 ++
optional/glpk/amd/amd_aat.c | 187 +
optional/glpk/amd/amd_control.c | 64 +
optional/glpk/amd/amd_defaults.c | 38 +
optional/glpk/amd/amd_dump.c | 180 +
optional/glpk/amd/amd_info.c | 120 +
optional/glpk/amd/amd_internal.h | 117 +
optional/glpk/amd/amd_order.c | 203 +
optional/glpk/amd/amd_post_tree.c | 121 +
optional/glpk/amd/amd_postorder.c | 207 +
optional/glpk/amd/amd_preprocess.c | 119 +
optional/glpk/amd/amd_valid.c | 93 +
optional/glpk/colamd/colamd.c | 3625 +++
optional/glpk/colamd/colamd.h | 69 +
optional/glpk/glpapi.h | 314 +
optional/glpk/glpapi01.c | 1575 ++
optional/glpk/glpapi02.c | 495 +
optional/glpk/glpapi03.c | 166 +
optional/glpk/glpapi04.c | 156 +
optional/glpk/glpapi05.c | 172 +
optional/glpk/glpapi06.c | 810 +
optional/glpk/glpapi07.c | 451 +
optional/glpk/glpapi08.c | 389 +
optional/glpk/glpapi09.c | 741 +
optional/glpk/glpapi10.c | 282 +
optional/glpk/glpapi11.c | 1221 +
optional/glpk/glpapi12.c | 2224 ++
optional/glpk/glpapi13.c | 702 +
optional/glpk/glpapi14.c | 274 +
optional/glpk/glpapi15.c | 614 +
optional/glpk/glpapi16.c | 329 +
optional/glpk/glpapi17.c | 1048 +
optional/glpk/glpapi18.c | 126 +
optional/glpk/glpapi19.c | 1201 +
optional/glpk/glpavl.c | 357 +
optional/glpk/glpavl.h | 123 +
optional/glpk/glpbfd.c | 485 +
optional/glpk/glpbfd.h | 75 +
optional/glpk/glpbfx.c | 91 +
optional/glpk/glpbfx.h | 71 +
optional/glpk/glpcpx.c | 1244 +
optional/glpk/glpdmp.c | 259 +
optional/glpk/glpdmp.h | 80 +
optional/glpk/glpdmx.c | 1472 ++
optional/glpk/glpenv.h | 228 +
optional/glpk/glpenv01.c | 234 +
optional/glpk/glpenv02.c | 73 +
optional/glpk/glpenv03.c | 233 +
optional/glpk/glpenv04.c | 118 +
optional/glpk/glpenv05.c | 229 +
optional/glpk/glpenv06.c | 172 +
optional/glpk/glpenv07.c | 676 +
optional/glpk/glpenv08.c | 156 +
optional/glpk/glpfhv.c | 778 +
optional/glpk/glpfhv.h | 170 +
optional/glpk/glpgmp.c | 1113 +
optional/glpk/glpgmp.h | 190 +
optional/glpk/glphbm.c | 519 +
optional/glpk/glphbm.h | 127 +
optional/glpk/glpini01.c | 581 +
optional/glpk/glpini02.c | 273 +
optional/glpk/glpios.h | 593 +
optional/glpk/glpios01.c | 1618 ++
optional/glpk/glpios02.c | 829 +
optional/glpk/glpios03.c | 1160 +
optional/glpk/glpios04.c | 307 +
optional/glpk/glpios05.c | 285 +
optional/glpk/glpios06.c | 1453 ++
optional/glpk/glpios07.c | 554 +
optional/glpk/glpios08.c | 912 +
optional/glpk/glpios09.c | 665 +
optional/glpk/glpios10.c | 353 +
optional/glpk/glpios11.c | 284 +
optional/glpk/glpios12.c | 180 +
optional/glpk/glpipm.c | 1147 +
optional/glpk/glpipm.h | 36 +
optional/glpk/glpk.h | 1750 ++
optional/glpk/glpk.inc | 1 +
optional/glpk/glplib.h | 135 +
optional/glpk/glplib01.c | 287 +
optional/glpk/glplib02.c | 340 +
optional/glpk/glplib03.c | 696 +
optional/glpk/glplpf.c | 983 +
optional/glpk/glplpf.h | 194 +
optional/glpk/glplpx01.c | 1546 ++
optional/glpk/glplpx02.c | 268 +
optional/glpk/glplpx03.c | 302 +
optional/glpk/glpluf.c | 1851 ++
optional/glpk/glpluf.h | 326 +
optional/glpk/glplux.c | 1028 +
optional/glpk/glplux.h | 221 +
optional/glpk/glpmat.c | 929 +
optional/glpk/glpmat.h | 198 +
optional/glpk/glpmpl.h | 2583 ++
optional/glpk/glpmpl01.c | 4721 ++++
optional/glpk/glpmpl02.c | 1205 +
optional/glpk/glpmpl03.c | 6084 +++++
optional/glpk/glpmpl04.c | 1429 ++
optional/glpk/glpmpl05.c | 566 +
optional/glpk/glpmpl06.c | 1008 +
optional/glpk/glpmps.c | 1407 ++
optional/glpk/glpnet.h | 60 +
optional/glpk/glpnet01.c | 301 +
optional/glpk/glpnet02.c | 314 +
optional/glpk/glpnet03.c | 776 +
optional/glpk/glpnet04.c | 772 +
optional/glpk/glpnet05.c | 367 +
optional/glpk/glpnet06.c | 387 +
optional/glpk/glpnet07.c | 222 +
optional/glpk/glpnet08.c | 245 +
optional/glpk/glpnet09.c | 239 +
optional/glpk/glpnpp.h | 520 +
optional/glpk/glpnpp01.c | 932 +
optional/glpk/glpnpp02.c | 1433 ++
optional/glpk/glpnpp03.c | 2865 +++
optional/glpk/glpnpp04.c | 1419 ++
optional/glpk/glpnpp05.c | 809 +
optional/glpk/glpqmd.c | 584 +
optional/glpk/glpqmd.h | 59 +
optional/glpk/glprgr.c | 165 +
optional/glpk/glprgr.h | 34 +
optional/glpk/glprng.h | 68 +
optional/glpk/glprng01.c | 231 +
optional/glpk/glprng02.c | 76 +
optional/glpk/glpscf.c | 638 +
optional/glpk/glpscf.h | 126 +
optional/glpk/glpscl.c | 476 +
optional/glpk/glpsdf.c | 266 +
optional/glpk/glpspm.c | 846 +
optional/glpk/glpspm.h | 165 +
optional/glpk/glpspx.h | 40 +
optional/glpk/glpspx01.c | 2960 +++
optional/glpk/glpspx02.c | 3084 +++
optional/glpk/glpsql.c | 1631 ++
optional/glpk/glpsql.h | 64 +
optional/glpk/glpssx.h | 418 +
optional/glpk/glpssx01.c | 844 +
optional/glpk/glpssx02.c | 479 +
optional/glpk/glpstd.h | 43 +
optional/glpk/glptsp.c | 672 +
optional/glpk/glptsp.h | 104 +
src/DensityGrid.cpp | 275 +
src/DensityGrid.h | 88 +
src/DensityGrid_3d.cpp | 296 +
src/DensityGrid_3d.h | 88 +
src/Makefile.am | 306 +
src/Makefile.in | 7991 ++++++
src/NetDataTypes.cpp | 225 +
src/NetDataTypes.h | 821 +
src/NetRoutines.cpp | 278 +
src/NetRoutines.h | 61 +
src/adjlist.c | 856 +
src/arpack.c | 1344 +
src/array.c | 50 +
src/array.pmt | 90 +
src/atlas-edges.h | 1294 +
src/atlas.c | 82 +
src/attributes.c | 430 +
src/basic_query.c | 64 +
src/bfgs.c | 201 +
src/bigint.c | 315 +
src/bigint.h | 105 +
src/bignum.c | 1953 ++
src/bignum.h | 120 +
src/bipartite.c | 1118 +
src/blas.c | 104 +
src/bliss.cc | 317 +
src/bliss_bignum.hh | 76 +
src/bliss_defs.hh | 52 +
src/bliss_eqrefhash.cc | 143 +
src/bliss_eqrefhash.hh | 58 +
src/bliss_graph.cc | 2495 ++
src/bliss_graph.hh | 236 +
src/bliss_heap.cc | 95 +
src/bliss_heap.hh | 47 +
src/bliss_kqueue.hh | 144 +
src/bliss_kstack.hh | 98 +
src/bliss_orbit.cc | 153 +
src/bliss_orbit.hh | 53 +
src/bliss_partition.cc | 917 +
src/bliss_partition.hh | 127 +
src/bliss_timer.cc | 111 +
src/bliss_timer.hh | 38 +
src/bliss_utils.cc | 60 +
src/bliss_utils.hh | 23 +
src/cattributes.c | 3718 +++
src/centrality.c | 3380 +++
src/cliques.c | 1166 +
src/clustertool.cpp | 657 +
src/cocitation.c | 764 +
src/cohesive_blocks.c | 567 +
src/community.c | 3520 +++
src/complex.c | 390 +
src/components.c | 838 +
src/conversion.c | 847 +
src/cores.c | 159 +
src/cs/UFconfig.h | 118 +
src/cs/cs.h | 756 +
src/cs/cs_add.c | 48 +
src/cs/cs_amd.c | 387 +
src/cs/cs_chol.c | 79 +
src/cs/cs_cholsol.c | 46 +
src/cs/cs_compress.c | 42 +
src/cs/cs_counts.c | 81 +
src/cs/cs_cumsum.c | 37 +
src/cs/cs_dfs.c | 56 +
src/cs/cs_dmperm.c | 164 +
src/cs/cs_droptol.c | 29 +
src/cs/cs_dropzeros.c | 29 +
src/cs/cs_dupl.c | 54 +
src/cs/cs_entry.c | 33 +
src/cs/cs_ereach.c | 43 +
src/cs/cs_etree.c | 50 +
src/cs/cs_fkeep.c | 45 +
src/cs/cs_gaxpy.c | 37 +
src/cs/cs_happly.c | 39 +
src/cs/cs_house.c | 50 +
src/cs/cs_ipvec.c | 29 +
src/cs/cs_leaf.c | 42 +
src/cs/cs_load.c | 46 +
src/cs/cs_lsolve.c | 38 +
src/cs/cs_ltsolve.c | 38 +
src/cs/cs_lu.c | 109 +
src/cs/cs_lusol.c | 46 +
src/cs/cs_malloc.c | 57 +
src/cs/cs_maxtrans.c | 112 +
src/cs/cs_multiply.c | 55 +
src/cs/cs_norm.c | 36 +
src/cs/cs_permute.c | 45 +
src/cs/cs_pinv.c | 31 +
src/cs/cs_post.c | 44 +
src/cs/cs_print.c | 66 +
src/cs/cs_pvec.c | 29 +
src/cs/cs_qr.c | 96 +
src/cs/cs_qrsol.c | 73 +
src/cs/cs_randperm.c | 44 +
src/cs/cs_reach.c | 39 +
src/cs/cs_scatter.c | 42 +
src/cs/cs_scc.c | 61 +
src/cs/cs_schol.c | 46 +
src/cs/cs_spsolve.c | 48 +
src/cs/cs_sqr.c | 108 +
src/cs/cs_symperm.c | 59 +
src/cs/cs_tdfs.c | 44 +
src/cs/cs_transpose.c | 45 +
src/cs/cs_updown.c | 68 +
src/cs/cs_usolve.c | 38 +
src/cs/cs_util.c | 139 +
src/cs/cs_utsolve.c | 38 +
src/decomposition.c | 444 +
src/distances.c | 211 +
src/dqueue.c | 49 +
src/dqueue.pmt | 382 +
src/drl_Node.h | 66 +
src/drl_Node_3d.h | 66 +
src/drl_graph.cpp | 1286 +
src/drl_graph.h | 128 +
src/drl_graph_3d.cpp | 854 +
src/drl_graph_3d.h | 120 +
src/drl_layout.cpp | 472 +
src/drl_layout.h | 65 +
src/drl_layout_3d.cpp | 123 +
src/drl_layout_3d.h | 65 +
src/drl_parse.cpp | 205 +
src/drl_parse.h | 70 +
src/eigen.c | 1453 ++
src/evolver_cit.c | 179 +
src/f2c.h | 230 +
src/f2c/abort_.c | 22 +
src/f2c/arithchk.c | 245 +
src/f2c/backspac.c | 76 +
src/f2c/c_abs.c | 20 +
src/f2c/c_cos.c | 23 +
src/f2c/c_div.c | 53 +
src/f2c/c_exp.c | 25 +
src/f2c/c_log.c | 23 +
src/f2c/c_sin.c | 23 +
src/f2c/c_sqrt.c | 41 +
src/f2c/cabs.c | 33 +
src/f2c/close.c | 101 +
src/f2c/ctype.c | 2 +
src/f2c/d_abs.c | 18 +
src/f2c/d_acos.c | 19 +
src/f2c/d_asin.c | 19 +
src/f2c/d_atan.c | 19 +
src/f2c/d_atn2.c | 19 +
src/f2c/d_cnjg.c | 19 +
src/f2c/d_cos.c | 19 +
src/f2c/d_cosh.c | 19 +
src/f2c/d_dim.c | 16 +
src/f2c/d_exp.c | 19 +
src/f2c/d_imag.c | 16 +
src/f2c/d_int.c | 19 +
src/f2c/d_lg10.c | 21 +
src/f2c/d_log.c | 19 +
src/f2c/d_mod.c | 46 +
src/f2c/d_nint.c | 20 +
src/f2c/d_prod.c | 16 +
src/f2c/d_sign.c | 18 +
src/f2c/d_sin.c | 19 +
src/f2c/d_sinh.c | 19 +
src/f2c/d_sqrt.c | 19 +
src/f2c/d_tan.c | 19 +
src/f2c/d_tanh.c | 19 +
src/f2c/derf_.c | 18 +
src/f2c/derfc_.c | 20 +
src/f2c/dfe.c | 151 +
src/f2c/dolio.c | 26 +
src/f2c/dtime_.c | 63 +
src/f2c/due.c | 77 +
src/f2c/dummy.c | 2 +
src/f2c/ef1asc_.c | 25 +
src/f2c/ef1cmc_.c | 20 +
src/f2c/endfile.c | 160 +
src/f2c/erf_.c | 22 +
src/f2c/erfc_.c | 22 +
src/f2c/err.c | 293 +
src/f2c/etime_.c | 57 +
src/f2c/exit_.c | 43 +
src/f2c/f77_aloc.c | 44 +
src/f2c/f77vers.c | 97 +
src/f2c/fio.h | 141 +
src/f2c/fmt.c | 530 +
src/f2c/fmt.h | 105 +
src/f2c/fmtlib.c | 51 +
src/f2c/fp.h | 28 +
src/f2c/ftell_.c | 52 +
src/f2c/getenv_.c | 62 +
src/f2c/h_abs.c | 18 +
src/f2c/h_dim.c | 16 +
src/f2c/h_dnnt.c | 19 +
src/f2c/h_indx.c | 32 +
src/f2c/h_len.c | 16 +
src/f2c/h_mod.c | 16 +
src/f2c/h_nint.c | 19 +
src/f2c/h_sign.c | 18 +
src/f2c/hl_ge.c | 18 +
src/f2c/hl_gt.c | 18 +
src/f2c/hl_le.c | 18 +
src/f2c/hl_lt.c | 18 +
src/f2c/i77vers.c | 343 +
src/f2c/i_abs.c | 18 +
src/f2c/i_dim.c | 16 +
src/f2c/i_dnnt.c | 19 +
src/f2c/i_indx.c | 32 +
src/f2c/i_len.c | 16 +
src/f2c/i_mod.c | 16 +
src/f2c/i_nint.c | 19 +
src/f2c/i_sign.c | 18 +
src/f2c/iio.c | 159 +
src/f2c/ilnw.c | 83 +
src/f2c/inquire.c | 117 +
src/f2c/l_ge.c | 18 +
src/f2c/l_gt.c | 18 +
src/f2c/l_le.c | 18 +
src/f2c/l_lt.c | 18 +
src/f2c/lbitbits.c | 68 +
src/f2c/lbitshft.c | 17 +
src/f2c/lio.h | 74 +
src/f2c/lread.c | 806 +
src/f2c/lwrite.c | 314 +
src/f2c/open.c | 301 +
src/f2c/pow_ci.c | 26 +
src/f2c/pow_dd.c | 19 +
src/f2c/pow_di.c | 41 +
src/f2c/pow_hh.c | 39 +
src/f2c/pow_ii.c | 39 +
src/f2c/pow_ri.c | 41 +
src/f2c/pow_zi.c | 60 +
src/f2c/pow_zz.c | 29 +
src/f2c/r_abs.c | 18 +
src/f2c/r_acos.c | 19 +
src/f2c/r_asin.c | 19 +
src/f2c/r_atan.c | 19 +
src/f2c/r_atn2.c | 19 +
src/f2c/r_cnjg.c | 18 +
src/f2c/r_cos.c | 19 +
src/f2c/r_cosh.c | 19 +
src/f2c/r_dim.c | 16 +
src/f2c/r_exp.c | 19 +
src/f2c/r_imag.c | 16 +
src/f2c/r_int.c | 19 +
src/f2c/r_lg10.c | 21 +
src/f2c/r_log.c | 19 +
src/f2c/r_mod.c | 46 +
src/f2c/r_nint.c | 20 +
src/f2c/r_sign.c | 18 +
src/f2c/r_sin.c | 19 +
src/f2c/r_sinh.c | 19 +
src/f2c/r_sqrt.c | 19 +
src/f2c/r_tan.c | 19 +
src/f2c/r_tanh.c | 19 +
src/f2c/rdfmt.c | 553 +
src/f2c/rewind.c | 30 +
src/f2c/rsfe.c | 91 +
src/f2c/rsli.c | 109 +
src/f2c/rsne.c | 618 +
src/f2c/s_cat.c | 86 +
src/f2c/s_cmp.c | 50 +
src/f2c/s_copy.c | 57 +
src/f2c/s_paus.c | 96 +
src/f2c/s_rnge.c | 32 +
src/f2c/s_stop.c | 48 +
src/f2c/sfe.c | 47 +
src/f2c/sig_die.c | 51 +
src/f2c/signal1.h | 35 +
src/f2c/signal1.h0 | 35 +
src/f2c/signal_.c | 21 +
src/f2c/signbit.c | 24 +
src/f2c/sue.c | 90 +
src/f2c/sysdep1.h | 71 +
src/f2c/sysdep1.h0 | 71 +
src/f2c/system_.c | 42 +
src/f2c/typesize.c | 18 +
src/f2c/uio.c | 75 +
src/f2c/uninit.c | 463 +
src/f2c/util.c | 57 +
src/f2c/wref.c | 294 +
src/f2c/wrtfmt.c | 377 +
src/f2c/wsfe.c | 78 +
src/f2c/wsle.c | 42 +
src/f2c/wsne.c | 32 +
src/f2c/xwsne.c | 77 +
src/f2c/z_abs.c | 18 +
src/f2c/z_cos.c | 21 +
src/f2c/z_div.c | 50 +
src/f2c/z_exp.c | 23 +
src/f2c/z_log.c | 121 +
src/f2c/z_sin.c | 21 +
src/f2c/z_sqrt.c | 35 +
src/fast_community.c | 921 +
src/feedback_arc_set.c | 643 +
src/flow.c | 2476 ++
src/foreign-dl-header.h | 41 +
src/foreign-dl-lexer.c | 2231 ++
src/foreign-dl-lexer.l | 142 +
src/foreign-dl-parser.c | 2148 ++
src/foreign-dl-parser.h | 105 +
src/foreign-dl-parser.y | 313 +
src/foreign-gml-header.h | 30 +
src/foreign-gml-lexer.c | 2054 ++
src/foreign-gml-lexer.l | 102 +
src/foreign-gml-parser.c | 1859 ++
src/foreign-gml-parser.h | 95 +
src/foreign-gml-parser.y | 262 +
src/foreign-graphml.c | 1511 ++
src/foreign-lgl-header.h | 35 +
src/foreign-lgl-lexer.c | 2013 ++
src/foreign-lgl-lexer.l | 102 +
src/foreign-lgl-parser.c | 1698 ++
src/foreign-lgl-parser.h | 85 +
src/foreign-lgl-parser.y | 152 +
src/foreign-ncol-header.h | 34 +
src/foreign-ncol-lexer.c | 2008 ++
src/foreign-ncol-lexer.l | 100 +
src/foreign-ncol-parser.c | 1687 ++
src/foreign-ncol-parser.h | 83 +
src/foreign-ncol-parser.y | 146 +
src/foreign-pajek-header.h | 43 +
src/foreign-pajek-lexer.c | 2469 ++
src/foreign-pajek-lexer.l | 148 +
src/foreign-pajek-parser.c | 2817 +++
src/foreign-pajek-parser.h | 179 +
src/foreign-pajek-parser.y | 758 +
src/foreign.c | 3334 +++
src/forestfire.c | 264 +
src/fortran_intrinsics.c | 53 +
src/games.c | 3866 +++
src/gengraph_box_list.cpp | 87 +
src/gengraph_box_list.h | 75 +
src/gengraph_definitions.h | 191 +
src/gengraph_degree_sequence.cpp | 375 +
src/gengraph_degree_sequence.h | 88 +
src/gengraph_graph_molloy_hash.cpp | 1043 +
src/gengraph_graph_molloy_hash.h | 198 +
src/gengraph_graph_molloy_optimized.cpp | 2013 ++
src/gengraph_graph_molloy_optimized.h | 263 +
src/gengraph_hash.h | 278 +
src/gengraph_header.h | 86 +
src/gengraph_mr-connected.cpp | 186 +
src/gengraph_powerlaw.cpp | 222 +
src/gengraph_powerlaw.h | 84 +
src/gengraph_qsort.h | 402 +
src/gengraph_random.cpp | 278 +
src/gengraph_random.h | 212 +
src/gengraph_vertex_cover.h | 64 +
src/glet.c | 860 +
src/glpk_support.c | 78 +
src/gml_tree.c | 259 +
src/hacks.c | 53 +
src/heap.c | 1061 +
src/heap.pmt | 345 +
src/hrg_dendro.h | 302 +
src/hrg_graph.h | 167 +
src/hrg_graph_simp.h | 162 +
src/hrg_rbtree.h | 164 +
src/hrg_splittree_eq.h | 185 +
src/igraph_arpack_internal.h | 219 +
src/igraph_blas_internal.h | 55 +
src/igraph_buckets.c | 190 +
src/igraph_error.c | 285 +
src/igraph_estack.c | 67 +
src/igraph_estack.h | 47 +
src/igraph_fixed_vectorlist.c | 76 +
src/igraph_flow_internal.h | 41 +
src/igraph_glpk_support.h | 48 +
src/igraph_gml_tree.h | 87 +
src/igraph_grid.c | 541 +
src/igraph_hacks_internal.h | 57 +
src/igraph_hashtable.c | 128 +
src/igraph_heap.c | 64 +
src/igraph_hrg.cc | 1025 +
src/igraph_hrg_types.cc | 3470 +++
src/igraph_interrupt_internal.h | 69 +
src/igraph_lapack_internal.h | 178 +
src/igraph_marked_queue.c | 115 +
src/igraph_marked_queue.h | 70 +
src/igraph_math.h | 82 +
src/igraph_psumtree.c | 98 +
src/igraph_set.c | 310 +
src/igraph_stack.c | 83 +
src/igraph_strvector.c | 590 +
src/igraph_trie.c | 389 +
src/igraph_types_internal.h | 395 +
src/infomap.cc | 317 +
src/infomap_FlowGraph.cc | 403 +
src/infomap_FlowGraph.h | 78 +
src/infomap_Greedy.cc | 609 +
src/infomap_Greedy.h | 85 +
src/infomap_Node.cc | 69 +
src/infomap_Node.h | 55 +
src/interrupt.c | 47 +
src/iterators.c | 1903 ++
src/lad.c | 1568 ++
src/lapack.c | 924 +
src/lapack/arpack.inc | 1 +
src/lapack/blas.inc | 1 +
src/lapack/dasum.c | 89 +
src/lapack/daxpy.c | 97 +
src/lapack/dcopy.c | 97 +
src/lapack/ddot.c | 99 +
src/lapack/dgebak.c | 223 +
src/lapack/dgebal.c | 399 +
src/lapack/dgeev.c | 552 +
src/lapack/dgeevx.c | 687 +
src/lapack/dgehd2.c | 180 +
src/lapack/dgehrd.c | 329 +
src/lapack/dgemm.c | 378 +
src/lapack/dgemv.c | 302 +
src/lapack/dgeqr2.c | 150 +
src/lapack/dger.c | 185 +
src/lapack/dgesv.c | 131 +
src/lapack/dgetf2.c | 179 +
src/lapack/dgetrf.c | 206 +
src/lapack/dgetrs.c | 172 +
src/lapack/dgetv0.c | 480 +
src/lapack/dhseqr.c | 471 +
src/lapack/disnan.c | 48 +
src/lapack/dlabad.c | 68 +
src/lapack/dlacn2.c | 253 +
src/lapack/dlacpy.c | 115 +
src/lapack/dladiv.c | 72 +
src/lapack/dlae2.c | 134 +
src/lapack/dlaebz.c | 612 +
src/lapack/dlaev2.c | 180 +
src/lapack/dlaexc.c | 443 +
src/lapack/dlagtf.c | 210 +
src/lapack/dlagts.c | 337 +
src/lapack/dlahqr.c | 614 +
src/lapack/dlahr2.c | 310 +
src/lapack/dlaisnan.c | 57 +
src/lapack/dlaln2.c | 556 +
src/lapack/dlamch.c | 169 +
src/lapack/dlaneg.c | 206 +
src/lapack/dlange.c | 185 +
src/lapack/dlanhs.c | 191 +
src/lapack/dlanst.c | 152 +
src/lapack/dlansy.c | 225 +
src/lapack/dlanv2.c | 225 +
src/lapack/dlapy2.c | 65 +
src/lapack/dlaqr0.c | 746 +
src/lapack/dlaqr1.c | 116 +
src/lapack/dlaqr2.c | 683 +
src/lapack/dlaqr3.c | 701 +
src/lapack/dlaqr4.c | 742 +
src/lapack/dlaqr5.c | 1012 +
src/lapack/dlaqrb.c | 602 +
src/lapack/dlaqtr.c | 816 +
src/lapack/dlar1v.c | 429 +
src/lapack/dlarf.c | 181 +
src/lapack/dlarfb.c | 787 +
src/lapack/dlarfg.c | 156 +
src/lapack/dlarft.c | 345 +
src/lapack/dlarfx.c | 718 +
src/lapack/dlarnv.c | 132 +
src/lapack/dlarra.c | 146 +
src/lapack/dlarrb.c | 338 +
src/lapack/dlarrc.c | 173 +
src/lapack/dlarrd.c | 777 +
src/lapack/dlarre.c | 848 +
src/lapack/dlarrf.c | 419 +
src/lapack/dlarrj.c | 328 +
src/lapack/dlarrk.c | 181 +
src/lapack/dlarrr.c | 164 +
src/lapack/dlarrv.c | 973 +
src/lapack/dlartg.c | 176 +
src/lapack/dlaruv.c | 178 +
src/lapack/dlascl.c | 340 +
src/lapack/dlaset.c | 142 +
src/lapack/dlasq2.c | 588 +
src/lapack/dlasq3.c | 348 +
src/lapack/dlasq4.c | 395 +
src/lapack/dlasq5.c | 229 +
src/lapack/dlasq6.c | 199 +
src/lapack/dlasr.c | 439 +
src/lapack/dlasrt.c | 272 +
src/lapack/dlassq.c | 106 +
src/lapack/dlaswp.c | 152 +
src/lapack/dlasy2.c | 460 +
src/lapack/dlatrd.c | 341 +
src/lapack/dmout.c | 393 +
src/lapack/dnaitr.c | 950 +
src/lapack/dnapps.c | 795 +
src/lapack/dnaup2.c | 978 +
src/lapack/dnaupd.c | 794 +
src/lapack/dnconv.c | 178 +
src/lapack/dneigh.c | 377 +
src/lapack/dneupd.c | 1195 +
src/lapack/dngets.c | 275 +
src/lapack/dnrm2.c | 88 +
src/lapack/dorg2r.c | 163 +
src/lapack/dorghr.c | 203 +
src/lapack/dorgqr.c | 269 +
src/lapack/dorm2l.c | 217 +
src/lapack/dorm2r.c | 221 +
src/lapack/dormhr.c | 247 +
src/lapack/dormql.c | 313 +
src/lapack/dormqr.c | 313 +
src/lapack/dormtr.c | 287 +
src/lapack/drot.c | 81 +
src/lapack/dsaitr.c | 950 +
src/lapack/dsapps.c | 621 +
src/lapack/dsaup2.c | 976 +
src/lapack/dsaupd.c | 792 +
src/lapack/dscal.c | 86 +
src/lapack/dsconv.c | 168 +
src/lapack/dseigt.c | 221 +
src/lapack/dsesrt.c | 288 +
src/lapack/dseupd.c | 1046 +
src/lapack/dsgets.c | 259 +
src/lapack/dsortc.c | 406 +
src/lapack/dsortr.c | 268 +
src/lapack/dstatn.c | 83 +
src/lapack/dstats.c | 64 +
src/lapack/dstebz.c | 758 +
src/lapack/dstein.c | 436 +
src/lapack/dstemr.c | 713 +
src/lapack/dsteqr.c | 607 +
src/lapack/dsterf.c | 453 +
src/lapack/dstqrb.c | 691 +
src/lapack/dswap.c | 104 +
src/lapack/dsyevr.c | 644 +
src/lapack/dsymv.c | 303 +
src/lapack/dsyr2.c | 264 +
src/lapack/dsyr2k.c | 396 +
src/lapack/dsytd2.c | 292 +
src/lapack/dsytrd.c | 348 +
src/lapack/dtrevc.c | 1212 +
src/lapack/dtrexc.c | 389 +
src/lapack/dtrmm.c | 442 +
src/lapack/dtrmv.c | 335 +
src/lapack/dtrsen.c | 514 +
src/lapack/dtrsm.c | 479 +
src/lapack/dtrsna.c | 590 +
src/lapack/dtrsyl.c | 1302 +
src/lapack/dvout.c | 277 +
src/lapack/idamax.c | 82 +
src/lapack/ieeeck.c | 164 +
src/lapack/iladlc.c | 79 +
src/lapack/iladlr.c | 78 +
src/lapack/ilaenv.c | 644 +
src/lapack/iparmq.c | 275 +
src/lapack/ivout.c | 278 +
src/lapack/lapack.inc | 2 +
src/lapack/len_trim.c | 36 +
src/lapack/lsame.c | 111 +
src/lapack/second.c | 42 +
src/lapack/xerbla.c | 78 +
src/layout.c | 3193 +++
src/matching.c | 991 +
src/math.c | 248 +
src/matrix.c | 150 +
src/matrix.pmt | 1607 ++
src/maximal_cliques.c | 406 +
src/maximal_cliques_template.h | 346 +
src/memory.c | 75 +
src/microscopic_update.c | 1191 +
src/mixing.c | 298 +
src/motifs.c | 1088 +
src/operators.c | 1215 +
src/optimal_modularity.c | 260 +
src/other.c | 417 +
src/plfit/arithmetic_ansi.h | 133 +
src/plfit/arithmetic_sse_double.h | 294 +
src/plfit/arithmetic_sse_float.h | 291 +
src/plfit/error.c | 74 +
src/plfit/error.h | 86 +
src/plfit/gss.c | 154 +
src/plfit/gss.h | 146 +
src/plfit/kolmogorov.c | 66 +
src/plfit/kolmogorov.h | 43 +
src/plfit/lbfgs.c | 1378 ++
src/plfit/lbfgs.h | 736 +
src/plfit/options.c | 47 +
src/plfit/platform.h | 54 +
src/plfit/plfit.c | 778 +
src/plfit/plfit.h | 109 +
src/plfit/plfit.inc | 9 +
src/plfit/zeta.c | 154 +
src/plfit/zeta.h | 53 +
src/pottsmodel_2.cpp | 2302 ++
src/pottsmodel_2.h | 165 +
src/progress.c | 152 +
src/prpack.cpp | 98 +
src/prpack.h | 54 +
src/prpack/prpack.h | 11 +
src/prpack/prpack.inc | 23 +
src/prpack/prpack_base_graph.cpp | 333 +
src/prpack/prpack_base_graph.h | 42 +
src/prpack/prpack_csc.h | 25 +
src/prpack/prpack_csr.h | 16 +
src/prpack/prpack_edge_list.h | 16 +
src/prpack/prpack_igraph_graph.cpp | 146 +
src/prpack/prpack_igraph_graph.h | 26 +
src/prpack/prpack_preprocessed_ge_graph.cpp | 64 +
src/prpack/prpack_preprocessed_ge_graph.h | 26 +
src/prpack/prpack_preprocessed_graph.h | 17 +
src/prpack/prpack_preprocessed_gs_graph.cpp | 81 +
src/prpack/prpack_preprocessed_gs_graph.h | 30 +
src/prpack/prpack_preprocessed_scc_graph.cpp | 202 +
src/prpack/prpack_preprocessed_scc_graph.h | 39 +
src/prpack/prpack_preprocessed_schur_graph.cpp | 121 +
src/prpack/prpack_preprocessed_schur_graph.h | 33 +
src/prpack/prpack_result.cpp | 12 +
src/prpack/prpack_result.h | 27 +
src/prpack/prpack_solver.cpp | 877 +
src/prpack/prpack_solver.h | 178 +
src/prpack/prpack_utils.cpp | 61 +
src/prpack/prpack_utils.h | 34 +
src/qsort.c | 212 +
src/qsort_r.c | 8 +
src/random.c | 2094 ++
src/revolver_cit.c | 6479 +++++
src/revolver_grow.c | 1284 +
src/revolver_ml_cit.c | 3548 +++
src/sbm.c | 214 +
src/scg.c | 2252 ++
src/scg_approximate_methods.c | 167 +
src/scg_exact_scg.c | 66 +
src/scg_headers.h | 128 +
src/scg_kmeans.c | 93 +
src/scg_optimal_method.c | 228 +
src/scg_utils.c | 92 +
src/separators.c | 814 +
src/sir.c | 257 +
src/spanning_trees.c | 368 +
src/sparsemat.c | 2673 ++
src/spectral_properties.c | 435 +
src/spmatrix.c | 1004 +
src/st-cuts.c | 1510 ++
src/stack.pmt | 291 +
src/statusbar.c | 130 +
src/structural_properties.c | 6771 +++++
src/structure_generators.c | 2288 ++
src/sugiyama.c | 1309 +
src/topology.c | 2955 +++
src/triangles.c | 925 +
src/triangles_template.h | 110 +
src/triangles_template1.h | 93 +
src/type_indexededgelist.c | 1702 ++
src/types.c | 146 +
src/vector.c | 434 +
src/vector.pmt | 2644 ++
src/vector_ptr.c | 620 +
src/version.c | 67 +
src/visitors.c | 533 +
src/walktrap.cpp | 173 +
src/walktrap_communities.cpp | 843 +
src/walktrap_communities.h | 175 +
src/walktrap_graph.cpp | 240 +
src/walktrap_graph.h | 107 +
src/walktrap_heap.cpp | 223 +
src/walktrap_heap.h | 133 +
src/zeroin.c | 203 +
tests/Makefile.am | 44 +
tests/Makefile.in | 484 +
tests/arpack.at | 68 +
tests/atlocal.in | 11 +
tests/attributes.at | 44 +
tests/basic.at | 81 +
tests/bipartite.at | 33 +
tests/centralization.at | 27 +
tests/cliques.at | 61 +
tests/community.at | 91 +
tests/components.at | 34 +
tests/conversion.at | 40 +
tests/eigen.at | 59 +
tests/flow.at | 66 +
tests/foreign.at | 114 +
tests/hrg.at | 37 +
tests/iterators.at | 57 +
tests/layout.at | 69 +
tests/matching.at | 26 +
tests/microscopic.at | 41 +
tests/motifs.at | 27 +
tests/mt.at | 33 +
tests/operators.at | 65 +
tests/other.at | 32 +
tests/package.m4 | 6 +
tests/qsort.at | 32 +
tests/random.at | 48 +
tests/scg.at | 79 +
tests/separators.at | 53 +
tests/structural_properties.at | 213 +
tests/structure_generators.at | 122 +
tests/testsuite | 17988 ++++++++++++++
tests/testsuite.at | 62 +
tests/topology.at | 48 +
tests/types.at | 199 +
tests/version.at | 29 +
tests/visitors.at | 33 +
tools/autoconf/ax_tls.m4 | 76 +
ylwrap | 247 +
1374 files changed, 510999 insertions(+), 190 deletions(-)
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