[med-svn] [Debian Wiki] Update of "DebianMed/Meeting/Aberdeen2014" by osallou
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Sat Feb 1 15:34:14 UTC 2014
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The "DebianMed/Meeting/Aberdeen2014" page has been changed by osallou:
https://wiki.debian.org/DebianMed/Meeting/Aberdeen2014?action=diff&rev1=107&rev2=108
* Related: Installing and updating Galaxy in a contolled, isolated environment for handling sensitive data [Matúš]
* Priorisation of Java-based tools [Steffen, someone else from pkg-java]
* Taverna - mostly hopeless to address without cheating, we should decide how to cheat [Steffen]
- * biojava [Olivier], if expected dependency packaged meanwhile
+ * biojava [Olivier]: fix biojava and package update of biojava3
+ * libgo-perl [Olivier]: fix test bug in new release and upload new release
+ * package new NGS softwares [Olivier]: discosnp and mapsembler2
* Jalview refresh and prototype non-free JABAWS package (If Sasha Sherstnev agrees ;) )
* OBO-Edit [Sascha]
* ... please add packages you are interested in ...
@@ -117, +119 @@
* Reviews - where are we
* BioConductor [Andreas? Tony?]
* Data handling [Steffen]
- * Future BioPerl version [Olivier]
+
* EDAM ontology in DebianMed packages? [ olivier ]: being able to search for Debian tools based on EDAM ontologies
* note [Matus]: preliminary brainstorming on this topic has been done by László, Jon Ison, Matúš (+Steffen, Hervé, Bertrand, Kristoffer Rapacki. Notes connected to attributes to annotate are in this section of the [[https://docs.google.com/document/d/19VpzwxZdlz1K4P1q1a-WYZUtiSXwUp2nafM716dzW8I/edit?pli=1#bookmark=id.v415n1pdyfl0|CodefestOntoDoc]]) - Let's get more people on board and decide and make concrete steps in Stonehaven!
* Development of bioinformatics tools registry and opportunities for synergy with Debian Med, Bio-Linux, Galaxy, Mobyle, ... [Kristoffer, Matúš]
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