[med-svn] [r-bioc-limma] branch upstream updated (3913647 -> c3b46aa)

[Charles Plessy]

This is an automated email from the git hooks/post-receive script.

plessy pushed a change to branch upstream
in repository r-bioc-limma.

      from  3913647   Imported Upstream version 3.18.4+dfsg
       new  c3b46aa   Imported Upstream version 3.18.10~dfsg

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 DESCRIPTION                   |   6 +-
 R/ebayes.R                    |   7 +-
 R/geneset-roast.R             | 115 ++++++++++------
 R/lmfit.R                     |  30 ++--
 R/read-ilmn.R                 |   7 +-
 R/subsetting.R                | 311 ++++++++++++++++--------------------------
 R/toptable.R                  |  22 ++-
 R/treat.R                     | 106 +-------------
 R/venn.R                      |   8 +-
 inst/doc/changelog.txt        |  53 +++++++
 inst/doc/intro.pdf            | Bin 46191 -> 46191 bytes
 man/camera.Rd                 |   5 +-
 man/ebayes.Rd                 |   2 +-
 man/normalizebetweenarrays.Rd |   2 +-
 man/roast.Rd                  |   4 +-
 man/subsetting.Rd             |  31 +++--
 man/voom.Rd                   |   8 +-
 tests/limma-Tests.R           |   6 +-
 tests/limma-Tests.Rout.save   |  58 +++++---
 19 files changed, 372 insertions(+), 409 deletions(-)

-- 
Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-bioc-limma.git