[med-svn] [arden] 01/01: fix move of module core to arden.core
Olivier Sallou
osallou at debian.org
Fri Feb 7 13:39:35 UTC 2014
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osallou pushed a commit to branch master
in repository arden.
commit 2927173fc23a38e589fa547ba9801f492a00fa24
Author: Olivier Sallou <olivier.sallou at debian.org>
Date: Fri Feb 7 14:39:30 2014 +0100
fix move of module core to arden.core
---
debian/control | 1 +
debian/patches/move_core_to_arden | 26 ++++++++++++++++++++++++++
debian/patches/series | 1 +
debian/rules | 5 +++++
4 files changed, 33 insertions(+)
diff --git a/debian/control b/debian/control
index 5803a20..20698c3 100644
--- a/debian/control
+++ b/debian/control
@@ -18,6 +18,7 @@ Depends: ${shlibs:Depends},
python-scipy,
python-numpy,
python-htseq,
+ python-matplotlib,
python-mpmath
Description: specificity control for read alignments using an artificial reference
ARDEN (Artificial Reference Driven Estimation of false positives in NGS
diff --git a/debian/patches/move_core_to_arden b/debian/patches/move_core_to_arden
new file mode 100644
index 0000000..bef685e
--- /dev/null
+++ b/debian/patches/move_core_to_arden
@@ -0,0 +1,26 @@
+Subject: core module is too generic
+Description: upstream puts python module core, too generic.
+ Move pakcage to arden.core
+Author: Olivier Sallou <osallou at debian.org>
+Last-Updated: 2014-07-02
+Forwarded: no
+--- a/arden-analyze
++++ b/arden-analyze
+@@ -46,8 +46,8 @@
+ import os
+
+
+-from core import AnalyseMapping as AM
+-from core import PlotData as PD
++from arden.core import AnalyseMapping as AM
++from arden.core import PlotData as PD
+
+
+
+@@ -274,4 +274,4 @@
+ main()
+ b = time.time()
+ print ("Finished!")
+- print ("Done in %0.2f seconds!" % (b-a))
+\ No newline at end of file
++ print ("Done in %0.2f seconds!" % (b-a))
diff --git a/debian/patches/series b/debian/patches/series
new file mode 100644
index 0000000..a96c0c7
--- /dev/null
+++ b/debian/patches/series
@@ -0,0 +1 @@
+move_core_to_arden
diff --git a/debian/rules b/debian/rules
index 70a032c..7f1cd64 100755
--- a/debian/rules
+++ b/debian/rules
@@ -19,5 +19,10 @@
%:
dh $@ --with python2
+override_dh_install:
+ dh_install
+ touch debian/arden/usr/share/pyshared/arden/__init__.py
+ touch debian/arden/usr/share/pyshared/arden/core/__init__.py
+
#get-orig-source:
# . debian/get-orig-source
--
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