[med-svn] [dnaclust] 02/03: Upload to unstable (actually new)
Andreas Tille
tille at debian.org
Tue Feb 11 09:11:36 UTC 2014
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository dnaclust.
commit 083abbb1634d9d2a31dedac026c005631cecc057
Author: Andreas Tille <tille at debian.org>
Date: Sat Feb 1 19:49:19 2014 +0100
Upload to unstable (actually new)
---
debian/changelog | 4 ++--
debian/dnaclust.1 | 2 +-
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/debian/changelog b/debian/changelog
index 4efe14a..1edf711 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,5 +1,5 @@
-dnaclust (3-1) UNRELEASED; urgency=low
+dnaclust (3-1) unstable; urgency=low
- * Initial release (Closes: #<bug>)
+ * Initial release (Closes: #737327)
-- Andreas Tille <tille at debian.org> Sat, 01 Feb 2014 17:10:29 +0100
diff --git a/debian/dnaclust.1 b/debian/dnaclust.1
index e1a3713..40092ee 100644
--- a/debian/dnaclust.1
+++ b/debian/dnaclust.1
@@ -43,7 +43,7 @@ program\&.
\fBdnaclust\fR
is a tool for clustering large number of short DNA sequences\&. The clusters are created in such a way that the "radius" of each clusters is no more than the specified threshold\&.
.PP
-The input sequences to be clustered should be in Fasta format\&. The id of each sequence is based on the first word of the seqeunce in the Fasta format\&. The first word is the prefix of the header up to the first occurance of white space charachters in the header\&. The output is written to STDOUT\&. If you want the output to be written to a file, just redirect the output (See Examples)\&.
+The input sequences to be clustered should be in Fasta format\&. The id of each sequence is based on the first word of the seqeunce in the Fasta format\&. The first word is the prefix of the header up to the first occurance of white space characters in the header\&. The output is written to STDOUT\&. If you want the output to be written to a file, just redirect the output (See Examples)\&.
.PP
The output has two modes: the default clustering mode, and clustering with multiple sequence alignment\&. In the clustering mode (without multiple alignment), each cluster will be printed on a separate line\&. The line will contain the ids of the sequences in the cluster\&. The first id in each line is the cluster center sequence id\&. Because of the way our clusters are constructed, the length of the cluster center sequence is always greater than or equal to the length of any of the seq [...]
.PP
--
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