[med-svn] r16106 - in trunk/packages/sift/trunk/debian: . upstream

[James McCoy]

Author: jamessan
Date: 2014-02-23 02:10:40 +0000 (Sun, 23 Feb 2014)
New Revision: 16106

Added:
   trunk/packages/sift/trunk/debian/upstream/
   trunk/packages/sift/trunk/debian/upstream/metadata
Removed:
   trunk/packages/sift/trunk/debian/upstream
Log:
Move debian/upstream to debian/upstream/metadata

Deleted: trunk/packages/sift/trunk/debian/upstream
===================================================================
--- trunk/packages/sift/trunk/debian/upstream	2014-02-23 02:10:28 UTC (rev 16105)
+++ trunk/packages/sift/trunk/debian/upstream	2014-02-23 02:10:40 UTC (rev 16106)
@@ -1,55 +0,0 @@
-Reference:
- - Author: Prateek Kumar and Steven Henikoff and Pauline C Ng
-   Title: Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
-   Journal: Nature Protocols
-   Year: 2009
-   Volume: 4
-   Number: 7
-   Pages: 1073-81
-   DOI: 10.1038/nprot.2009.86
-   PMID: 19561590
-   URL: http://www.nature.com/nprot/journal/v4/n7/full/nprot.2009.86.html
-   eprint: http://www.nature.com/nprot/journal/v4/n7/pdf/nprot.2009.86.pdf
- - Author: Pauline C Ng and Steven Henikoff
-   Title: Predicting the effects of amino acid substitutions on protein function
-   Journal: Annu Rev Genomics Hum Genet.
-   Year: 2006
-   Volume: 7
-   Pages: 61-80
-   DOI: 10.1146/annurev.genom.7.080505.115630
-   PMID: 16824020
-   URL: http://www.annualreviews.org/doi/abs/10.1146/annurev.genom.7.080505.115630
-   eprint: http://www.annualreviews.org/doi/pdf/10.1146/annurev.genom.7.080505.115630
- - Author: Pauline C Ng and Steven Henikoff
-   Title: "SIFT: Predicting amino acid changes that affect protein function"
-   Journal: Nucleic Acids Research
-   Year: 2003
-   Volume: 31
-   Number: 13
-   Pages: 3812-4
-   DOI: 10.1093/nar/gkg509
-   PMID: 12824425
-   URL: http://nar.oxfordjournals.org/content/31/13/3812.abstract
-   eprint: http://nar.oxfordjournals.org/content/31/13/3812.full.pdf+html
- - Author: Pauline C Ng and Steven Henikoff
-   Title: "Accounting for human polymorphisms predicted to affect protein function"
-   Journal: Genome Research
-   Year: 2002
-   Volume: 12
-   Number: 3
-   Pages: 436-46
-   DOI: 10.1101/gr.212802
-   PMID: 11875032
-   URL: http://genome.cshlp.org/content/12/3/436
-   eprint: http://genome.cshlp.org/content/12/3/436.full.pdf+html
- - Author: Pauline C Ng and Steven Henikoff
-   Title: Predicting deleterious amino acid substitutions
-   Journal: Genome Research
-   Year: 2001
-   Volume: 11
-   Number: 5
-   Pages: 863-74
-   DOI: 10.1101/gr.176601
-   PMID: 11337480
-   URL: http://genome.cshlp.org/content/11/5/863
-   eprint: http://genome.cshlp.org/content/11/5/863.full.pdf+html

Copied: trunk/packages/sift/trunk/debian/upstream/metadata (from rev 16105, trunk/packages/sift/trunk/debian/upstream)
===================================================================
--- trunk/packages/sift/trunk/debian/upstream/metadata	                        (rev 0)
+++ trunk/packages/sift/trunk/debian/upstream/metadata	2014-02-23 02:10:40 UTC (rev 16106)
@@ -0,0 +1,55 @@
+Reference:
+ - Author: Prateek Kumar and Steven Henikoff and Pauline C Ng
+   Title: Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
+   Journal: Nature Protocols
+   Year: 2009
+   Volume: 4
+   Number: 7
+   Pages: 1073-81
+   DOI: 10.1038/nprot.2009.86
+   PMID: 19561590
+   URL: http://www.nature.com/nprot/journal/v4/n7/full/nprot.2009.86.html
+   eprint: http://www.nature.com/nprot/journal/v4/n7/pdf/nprot.2009.86.pdf
+ - Author: Pauline C Ng and Steven Henikoff
+   Title: Predicting the effects of amino acid substitutions on protein function
+   Journal: Annu Rev Genomics Hum Genet.
+   Year: 2006
+   Volume: 7
+   Pages: 61-80
+   DOI: 10.1146/annurev.genom.7.080505.115630
+   PMID: 16824020
+   URL: http://www.annualreviews.org/doi/abs/10.1146/annurev.genom.7.080505.115630
+   eprint: http://www.annualreviews.org/doi/pdf/10.1146/annurev.genom.7.080505.115630
+ - Author: Pauline C Ng and Steven Henikoff
+   Title: "SIFT: Predicting amino acid changes that affect protein function"
+   Journal: Nucleic Acids Research
+   Year: 2003
+   Volume: 31
+   Number: 13
+   Pages: 3812-4
+   DOI: 10.1093/nar/gkg509
+   PMID: 12824425
+   URL: http://nar.oxfordjournals.org/content/31/13/3812.abstract
+   eprint: http://nar.oxfordjournals.org/content/31/13/3812.full.pdf+html
+ - Author: Pauline C Ng and Steven Henikoff
+   Title: "Accounting for human polymorphisms predicted to affect protein function"
+   Journal: Genome Research
+   Year: 2002
+   Volume: 12
+   Number: 3
+   Pages: 436-46
+   DOI: 10.1101/gr.212802
+   PMID: 11875032
+   URL: http://genome.cshlp.org/content/12/3/436
+   eprint: http://genome.cshlp.org/content/12/3/436.full.pdf+html
+ - Author: Pauline C Ng and Steven Henikoff
+   Title: Predicting deleterious amino acid substitutions
+   Journal: Genome Research
+   Year: 2001
+   Volume: 11
+   Number: 5
+   Pages: 863-74
+   DOI: 10.1101/gr.176601
+   PMID: 11337480
+   URL: http://genome.cshlp.org/content/11/5/863
+   eprint: http://genome.cshlp.org/content/11/5/863.full.pdf+html