[med-svn] r16216 - in trunk/packages/tree-puzzle/trunk/debian: . upstream

Sun Feb 23 02:47:11 UTC 2014

Author: jamessan
Date: 2014-02-23 02:47:11 +0000 (Sun, 23 Feb 2014)
New Revision: 16216

Added:
   trunk/packages/tree-puzzle/trunk/debian/upstream/
   trunk/packages/tree-puzzle/trunk/debian/upstream/metadata
Removed:
   trunk/packages/tree-puzzle/trunk/debian/upstream
Log:
Move debian/upstream to debian/upstream/metadata

Deleted: trunk/packages/tree-puzzle/trunk/debian/upstream
===================================================================

--- trunk/packages/tree-puzzle/trunk/debian/upstream	2014-02-23 02:46:58 UTC (rev 16215)
+++ trunk/packages/tree-puzzle/trunk/debian/upstream	2014-02-23 02:47:11 UTC (rev 16216)
@@ -1,63 +0,0 @@
-Reference:
- - Author: Heiko A. Schmidt and Korbinian Strimmer and Martin Vingron and Arndt von Haeseler
-   Title: "TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing"
-   Journal: Bioinformatics
-   Year: 2002
-   Volume: 18
-   Number: 3
-   Pages: 502-504
-   DOI: 10.1093/bioinformatics/18.3.502
-   PMID: 11934758
-   URL: http://bioinformatics.oxfordjournals.org/content/18/3/502
-   eprint: http://bioinformatics.oxfordjournals.org/content/18/3/502.full.pdf+html
- - Author: Korbinian Strimmer and Arndt von Haeseler
-   Title: "Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies"
-   Journal: Mol. Biol. Evol.
-   Year: 1996
-   Volume: 13
-   Number: 7
-   Pages: 964-969
-   URL: http://mbe.oxfordjournals.org/content/13/7/964.citation
-   eprint: http://mbe.oxfordjournals.org/content/13/7/964.full.pdf+html
- - Author: Korbinian Strimmer and Arndt von Haeseler
-   Title: "Likelihood-mapping: A simple method to visualize phylogenetic content of a sequence alignment"
-   Journal: Proceedings of the National Academy of Sciences of the United States of America
-   Year: 1997
-   Volume: 94
-   Number: 13
-   Pages: 6815-6819
-   PMID: 9192648
-   URL: http://www.pnas.org/content/94/13/6815.long
-   eprint: http://www.pnas.org/content/94/13/6815.full.pdf+html
- - Author: Korbinian Strimmer and N. Goldman and Arndt von Haeseler
-   Title: Bayesian Probabilities and Quartet Puzzling
-   Journal: Molecular Biology and Evolution
-   Year: 1997
-   Volume: 14
-   Number: 2
-   Pages: 210-213
-   URL: http://mbe.oxfordjournals.org/content/14/2/210.citation
-   eprint: http://mbe.oxfordjournals.org/content/14/2/210.full.pdf+html
- - Author: Heiko A. Schmidt and Korbinian Strimmer and Martin Vingron and Arndt von Haeseler
-   Title: "TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing"
-   Journal: Bioinformatics
-   Year: 2002
-   Volume: 18
-   Number: 3
-   Pages: 502-504
-   DOI: 10.1093/bioinformatics/18.3.502
-   PMID: 11934758
-   URL: http://bioinformatics.oxfordjournals.org/content/18/3/502
-   eprint: http://bioinformatics.oxfordjournals.org/content/18/3/502.full.pdf+html
-   debian-package: tree-ppuzzle 
- - Author: Heiko A. Schmidt and E. Petzold and Martin Vingron and Arndt von Haeseler
-   Title: "Molecular phylogenetics: parallelized parameter estimation and quartet puzzling"
-   Journal: Journal of Parallel and Distributed Computing
-   Year: 2003
-   Volume: 63
-   Number: 7-8
-   Pages: 719–727
-   DOI: 10.1016/S0743-7315(03)00129-1
-   URL: http://www.sciencedirect.com/science/article/pii/S0743731503001291
-   eprint: http://pdn.sciencedirect.com/science?_ob=MiamiImageURL&_cid=272438&_user=661252&_pii=S0743731503001291&_check=y&_origin=article&_zone=toolbar&_coverDate=31-Aug-2003&view=c&originContentFamily=serial&wchp=dGLbVlt-zSkWb&md5=3ed4a64214b45f1cd935565b0cbc909b/1-s2.0-S0743731503001291-main.pdf
-   debian-package: tree-ppuzzle 

Copied: trunk/packages/tree-puzzle/trunk/debian/upstream/metadata (from rev 16215, trunk/packages/tree-puzzle/trunk/debian/upstream)
===================================================================
--- trunk/packages/tree-puzzle/trunk/debian/upstream/metadata	                        (rev 0)
+++ trunk/packages/tree-puzzle/trunk/debian/upstream/metadata	2014-02-23 02:47:11 UTC (rev 16216)
@@ -0,0 +1,63 @@
+Reference:
+ - Author: Heiko A. Schmidt and Korbinian Strimmer and Martin Vingron and Arndt von Haeseler
+   Title: "TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing"
+   Journal: Bioinformatics
+   Year: 2002
+   Volume: 18
+   Number: 3
+   Pages: 502-504
+   DOI: 10.1093/bioinformatics/18.3.502
+   PMID: 11934758
+   URL: http://bioinformatics.oxfordjournals.org/content/18/3/502
+   eprint: http://bioinformatics.oxfordjournals.org/content/18/3/502.full.pdf+html
+ - Author: Korbinian Strimmer and Arndt von Haeseler
+   Title: "Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies"
+   Journal: Mol. Biol. Evol.
+   Year: 1996
+   Volume: 13
+   Number: 7
+   Pages: 964-969
+   URL: http://mbe.oxfordjournals.org/content/13/7/964.citation
+   eprint: http://mbe.oxfordjournals.org/content/13/7/964.full.pdf+html
+ - Author: Korbinian Strimmer and Arndt von Haeseler
+   Title: "Likelihood-mapping: A simple method to visualize phylogenetic content of a sequence alignment"
+   Journal: Proceedings of the National Academy of Sciences of the United States of America
+   Year: 1997
+   Volume: 94
+   Number: 13
+   Pages: 6815-6819
+   PMID: 9192648
+   URL: http://www.pnas.org/content/94/13/6815.long
+   eprint: http://www.pnas.org/content/94/13/6815.full.pdf+html
+ - Author: Korbinian Strimmer and N. Goldman and Arndt von Haeseler
+   Title: Bayesian Probabilities and Quartet Puzzling
+   Journal: Molecular Biology and Evolution
+   Year: 1997
+   Volume: 14
+   Number: 2
+   Pages: 210-213
+   URL: http://mbe.oxfordjournals.org/content/14/2/210.citation
+   eprint: http://mbe.oxfordjournals.org/content/14/2/210.full.pdf+html
+ - Author: Heiko A. Schmidt and Korbinian Strimmer and Martin Vingron and Arndt von Haeseler
+   Title: "TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing"
+   Journal: Bioinformatics
+   Year: 2002
+   Volume: 18
+   Number: 3
+   Pages: 502-504
+   DOI: 10.1093/bioinformatics/18.3.502
+   PMID: 11934758
+   URL: http://bioinformatics.oxfordjournals.org/content/18/3/502
+   eprint: http://bioinformatics.oxfordjournals.org/content/18/3/502.full.pdf+html
+   debian-package: tree-ppuzzle 
+ - Author: Heiko A. Schmidt and E. Petzold and Martin Vingron and Arndt von Haeseler
+   Title: "Molecular phylogenetics: parallelized parameter estimation and quartet puzzling"
+   Journal: Journal of Parallel and Distributed Computing
+   Year: 2003
+   Volume: 63
+   Number: 7-8
+   Pages: 719–727
+   DOI: 10.1016/S0743-7315(03)00129-1
+   URL: http://www.sciencedirect.com/science/article/pii/S0743731503001291
+   eprint: http://pdn.sciencedirect.com/science?_ob=MiamiImageURL&_cid=272438&_user=661252&_pii=S0743731503001291&_check=y&_origin=article&_zone=toolbar&_coverDate=31-Aug-2003&view=c&originContentFamily=serial&wchp=dGLbVlt-zSkWb&md5=3ed4a64214b45f1cd935565b0cbc909b/1-s2.0-S0743731503001291-main.pdf
+   debian-package: tree-ppuzzle 


