[med-svn] [r-cran-vegan] branch master updated (6d6b02e -> 74f5d61)

Andreas Tille tille at debian.org
Tue Jan 21 08:45:27 UTC 2014


This is an automated email from the git hooks/post-receive script.

tille pushed a change to branch master
in repository r-cran-vegan.

      from  6d6b02e   New upstream release, no new copyright nor license notice.
       new  875a864   s/r-cran-tcltk/r-cran-tcltk2/
       new  3756253   debian/source/format: 3.0 (quilt)
       new  1fc8221   Upload to unstable
       new  5094565   Imported Upstream version 2.0-10
       new  22d9f15   Merge tag 'upstream/2.0-10'
       new  74f5d61   New upstream version has versioned (Build-)Depends on r-cran-permute

The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 DESCRIPTION                   |  10 ++--
 MD5                           |  93 +++++++++++++++++------------------
 NAMESPACE                     |   3 --
 R/boxplot.specaccum.R         |   4 +-
 R/confint.fisherfit.R         |   6 ---
 R/decostand.R                 |   4 +-
 R/envfit.default.R            |  10 ++--
 R/factorfit.R                 |   8 ++-
 R/fisher.alpha.R              |   6 +--
 R/fisherfit.R                 |  67 +++++++++++++++++--------
 R/nestednodf.R                |   6 +--
 R/ordiArrowMul.R              |   2 +-
 R/permutest.betadisper.R      |  53 ++++++++++++++------
 R/plot.profile.fisherfit.R    |  16 ------
 R/plot.renyiaccum.R           |  13 +++--
 R/plot.specaccum.R            |  40 +++++++++++++--
 R/print.cca.R                 |   2 +-
 R/print.fisherfit.R           |  10 ++--
 R/print.oecosimu.R            |   4 +-
 R/profile.fisherfit.R         |  43 ----------------
 R/renyiaccum.R                |  17 +++++--
 R/specaccum.R                 |  36 +++++++++++---
 R/tsallisaccum.R              |   5 +-
 R/vectorfit.R                 |   3 +-
 debian/changelog              |  15 ++++--
 debian/control                |  12 ++---
 debian/source/format          |   1 +
 inst/ChangeLog                |  24 ++++++++-
 inst/NEWS.Rd                  |  75 ++++++++++++++++++++++++++++
 inst/doc/FAQ-vegan.pdf        | Bin 148690 -> 149064 bytes
 inst/doc/NEWS.html            |  89 +++++++++++++++++++++++++++++++++
 inst/doc/decision-vegan.pdf   | Bin 319750 -> 324746 bytes
 inst/doc/diversity-vegan.R    |  42 +++++++---------
 inst/doc/diversity-vegan.Rnw  |  15 +-----
 inst/doc/diversity-vegan.pdf  | Bin 358270 -> 357896 bytes
 inst/doc/intro-vegan.pdf      | Bin 237324 -> 260455 bytes
 man/betadisper.Rd             |   4 +-
 man/diversity.Rd              |   8 +--
 man/fisherfit.Rd              |  46 ++---------------
 man/nobs.adonis.Rd            |   7 +--
 man/permutest.betadisper.Rd   |   7 ++-
 man/renyi.Rd                  |  18 +++++--
 man/screeplot.cca.Rd          |   5 +-
 man/simper.Rd                 |   2 +-
 man/specaccum.Rd              |  16 ++++--
 man/tsallis.Rd                | 111 ++++++++++++++++++++++++++++++------------
 vignettes/FAQ-vegan.pdf       | Bin 148690 -> 149064 bytes
 vignettes/NEWS.html           |  89 +++++++++++++++++++++++++++++++++
 vignettes/decision-vegan.tex  |  20 ++++----
 vignettes/diversity-vegan.Rnw |  15 +-----
 vignettes/diversity-vegan.tex | 111 +++++++++++++++++-------------------------
 vignettes/intro-vegan.tex     |  60 ++++++++++++-----------
 52 files changed, 779 insertions(+), 474 deletions(-)
 delete mode 100644 R/confint.fisherfit.R
 delete mode 100644 R/plot.profile.fisherfit.R
 delete mode 100644 R/profile.fisherfit.R
 create mode 100644 debian/source/format

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