[med-svn] [Debian Wiki] Update of "DebianMed/Meeting/Aberdeen2014" by MatusKalas

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Tue Jan 21 18:20:04 UTC 2014


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The "DebianMed/Meeting/Aberdeen2014" page has been changed by MatusKalas:
https://wiki.debian.org/DebianMed/Meeting/Aberdeen2014?action=diff&rev1=82&rev2=83

Comment:
Added myself, an EDAM talk option, and tools registry into agenda

  || 16|| Peter Cock ||  || no || no || BioPython || Dundee || 1 Feb || 1 Feb ||
  || 17|| Piotr Chmura  || pjchmura at cbs.dtu.dk || yes        ||       yes      || Danish ELIXIR Node || Copenhagen (DK) || 31 Jan (before 5pm)       || 3 Feb (morning)  ||
  || 18|| Emil Rydza  || ekr at cbs.dtu.dk || yes        ||       yes      || Danish ELIXIR Node || Copenhagen (DK) || 31 Jan (before 5pm)       || 3 Feb (morning)  ||
+ || 19|| Matúš Kalaš  || matus.kalas at uib.no || yes        ||       yes      || U Bergen (EDAM) || Bergen (NO) || 31 Jan ~11am       || 3 Feb ~4pm  ||
+ 
  == Schedule ==
  
  The bulk of the meeting is in a hackathon format, with people working in groups toward specific goals. Please edit the agenda below to add suggested topics. Please also volunteer to give a short talk about your area of interest and add it to the schedule. We will have a computer projector available. To get us in the mood, we will have a warm-up session on the Friday evening with short talks and updates (15min). We will also have presentations to start off the other two days (30min).
@@ -69, +71 @@

  '''Saturday 1st Feb'''
  ||09:30||Demo by invited speaker Brad Chapman, on [[http://cloudbiolinux.org|Cloud BioLinux]]||
  ||10:30||Coffee break||
- ||11:00||Talk?||
+ ||11:00||Talk? If interest, Matúš can give a talk about the EDAM ontology||
  ||11:30||Talk?||
  ||12:00||Talk?||
  ||12:30||Talk?||
@@ -109, +111 @@

   * Future BioPerl version [Olivier]
   * EDAM ontology in DebianMed packages? [ olivier ]: being able to search for Debian tools based on EDAM ontologies
    * note [Matus]: preliminary brainstorming on this topic has been done by László, Jon Ison, Matúš (+Steffen, Hervé, Bertrand, Kristoffer Rapacki. Notes connected to attributes to annotate are in this section of the [[https://docs.google.com/document/d/19VpzwxZdlz1K4P1q1a-WYZUtiSXwUp2nafM716dzW8I/edit?pli=1#bookmark=id.v415n1pdyfl0|CodefestOntoDoc]]) - Let's get more people on board and decide and make concrete steps in Stonehaven!
+  * Development of bioinformatics tools registry and opportunities for synergy with Debian Med, Bio-Linux, Galaxy, Mobyle, ... [Kristoffer, Matúš]
   * Community development, licensing, and potentially packaging of "standards" (incl. ontologies, schemata, ...) - what are the good, sustainable ways? Interested: Matus
   * p2pDB [Luca] - beyond the web: a peer to peer approach to data sharing for clinical trials and bioinformatics research
   * Bioinformatics education on the Raspberry Pi [Daniel]



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