[med-svn] r15892 - in trunk/packages/seqan/trunk/debian: . patches

[Andreas Tille]

Author: tille
Date: 2014-01-29 07:34:20 +0000 (Wed, 29 Jan 2014)
New Revision: 15892

Modified:
   trunk/packages/seqan/trunk/debian/changelog
   trunk/packages/seqan/trunk/debian/patches/skip_splazers_test.patch
   trunk/packages/seqan/trunk/debian/rules
Log:
Exclude three test that are failing according to a hint of upstream


Modified: trunk/packages/seqan/trunk/debian/changelog
===================================================================
--- trunk/packages/seqan/trunk/debian/changelog	2014-01-28 20:26:09 UTC (rev 15891)
+++ trunk/packages/seqan/trunk/debian/changelog	2014-01-29 07:34:20 UTC (rev 15892)
@@ -1,4 +1,4 @@
-seqan (1.4.1-3) UNRELEASED; urgency=medium
+seqan (1.4.1-3) unstable; urgency=medium
 
   * debian/rules:
      - Run test suite only on powerfull architectures (amd64)

Modified: trunk/packages/seqan/trunk/debian/patches/skip_splazers_test.patch
===================================================================
--- trunk/packages/seqan/trunk/debian/patches/skip_splazers_test.patch	2014-01-28 20:26:09 UTC (rev 15891)
+++ trunk/packages/seqan/trunk/debian/patches/skip_splazers_test.patch	2014-01-29 07:34:20 UTC (rev 15892)
@@ -6,9 +6,9 @@
  .
  Hint was given by upstream "Holtgrewe, Manuel" <manuel.holtgrewe at fu-berlin.de>
 
---- a/core/apps/splazers/CMakeLists.txt
-+++ b/core/apps/splazers/CMakeLists.txt
-@@ -71,7 +71,8 @@ install (FILES example/genome.fa
+--- seqan-1.4.1.orig/core/apps/splazers/CMakeLists.txt
++++ seqan-1.4.1/core/apps/splazers/CMakeLists.txt
+@@ -71,7 +71,8 @@
  # App Test
  # ----------------------------------------------------------------------------
  
@@ -18,3 +18,27 @@
  
  # ----------------------------------------------------------------------------
  # CPack Install
+--- seqan-1.4.1.orig/core/apps/razers/CMakeLists.txt
++++ seqan-1.4.1/core/apps/razers/CMakeLists.txt
+@@ -74,7 +74,8 @@
+ # App Test
+ # ----------------------------------------------------------------------------
+ 
+-seqan_add_app_test (razers)
++# Also this test fails on Debian Builds
++# seqan_add_app_test (razers)
+ 
+ # ----------------------------------------------------------------------------
+ # Setup Common Tool Description for Generic Workflow Nodes
+--- seqan-1.4.1.orig/core/apps/razers2/CMakeLists.txt
++++ seqan-1.4.1/core/apps/razers2/CMakeLists.txt
+@@ -75,7 +75,8 @@
+ # App Test
+ # ----------------------------------------------------------------------------
+ 
+-seqan_add_app_test (razers2)
++# This test fails as well in Debian builds
++# seqan_add_app_test (razers2)
+ 
+ # ----------------------------------------------------------------------------
+ # Setup Common Tool Description for Generic Workflow Nodes

Modified: trunk/packages/seqan/trunk/debian/rules
===================================================================
--- trunk/packages/seqan/trunk/debian/rules	2014-01-28 20:26:09 UTC (rev 15891)
+++ trunk/packages/seqan/trunk/debian/rules	2014-01-29 07:34:20 UTC (rev 15892)
@@ -42,7 +42,7 @@
 	find $(CURDIR)/debian/seqan-apps -type f -name LICENSE -delete
 	if [ -d $(CURDIR)/debian/seqan-dev ] ; then \
 	    find $(CURDIR)/debian/seqan-dev  -type f -name LICENSE -delete ; \
-	    # Delete *.pyc files that somehow end up in seqan-dev documentation
+	    # Delete *.pyc files that somehow end up in seqan-dev documentation \
 	    find $(CURDIR)/debian/seqan-dev -type f -name "*.pyc" -delete ; \
 	fi