[med-svn] [picard-tools] 01/01: update binary with new programs CollectWgsMetrics and AddCommentsToBam

Olivier Sallou osallou at debian.org
Fri Jun 6 21:42:04 UTC 2014


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osallou pushed a commit to branch master
in repository picard-tools.

commit 4f14a6bec5c9da89f18a7b842cc01a0c6133554a
Author: Olivier Sallou <olivier.sallou at debian.org>
Date:   Fri Jun 6 23:41:53 2014 +0200

    update binary with new programs CollectWgsMetrics and AddCommentsToBam
---
 debian/bin/picard-tools | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/debian/bin/picard-tools b/debian/bin/picard-tools
index 1392b40..eaf192f 100755
--- a/debian/bin/picard-tools
+++ b/debian/bin/picard-tools
@@ -16,6 +16,7 @@ fi
 
 case $command in
 	AddOrReplaceReadGroups)         main=net.sf.picard.sam.AddOrReplaceReadGroups;;
+	AddCommentsToBam)               main=net.sf.picard.sam.AddCommentsToBam;;
 	BamIndexStats)                  main=net.sf.picard.sam.BamIndexStats;;
 	BamToBfq)                       main=net.sf.picard.fastq.BamToBfq;;
 	BuildBamIndex)                  main=net.sf.picard.sam.BuildBamIndex;;
@@ -28,6 +29,7 @@ case $command in
 	CollectMultipleMetrics)         main=net.sf.picard.analysis.CollectMultipleMetrics;;
 	CollectRnaSeqMetrics)           main=net.sf.picard.analysis.CollectRnaSeqMetrics;;
 	CollectTargetedPcrMetrics)      main=net.sf.picard.analysis.CollectTargetedPcrMetrics;;
+	CollectWgsMetrics)              main=net.sf.picard.analysis.CollectWgsMetrics;;
 	CompareSAMs)                    main=net.sf.picard.sam.CompareSAMs;;
 	CreateSequenceDictionary)       main=net.sf.picard.sam.CreateSequenceDictionary;;
 	DownsampleSam)                  main=net.sf.picard.sam.DownsampleSam;;

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