[med-svn] r17161 - in trunk/packages/python-biopython/trunk/debian: . tests

[Andreas Tille]

Author: tille
Date: 2014-06-14 19:46:10 +0000 (Sat, 14 Jun 2014)
New Revision: 17161

Modified:
   trunk/packages/python-biopython/trunk/debian/changelog
   trunk/packages/python-biopython/trunk/debian/rules
   trunk/packages/python-biopython/trunk/debian/tests/run-unit-test
Log:
Use mktemp as HOME for testing


Modified: trunk/packages/python-biopython/trunk/debian/changelog
===================================================================
--- trunk/packages/python-biopython/trunk/debian/changelog	2014-06-14 17:59:43 UTC (rev 17160)
+++ trunk/packages/python-biopython/trunk/debian/changelog	2014-06-14 19:46:10 UTC (rev 17161)
@@ -1,3 +1,10 @@
+python-biopython (1.64+dfsg-2) UNRELEASED; urgency=medium
+
+  * Use mktemp as HOME for testing
+    Closes: #751586
+
+ -- Andreas Tille <tille at debian.org>  Sat, 14 Jun 2014 20:12:02 +0200
+
 python-biopython (1.64+dfsg-1) unstable; urgency=medium
 
   * New upstream version

Modified: trunk/packages/python-biopython/trunk/debian/rules
===================================================================
--- trunk/packages/python-biopython/trunk/debian/rules	2014-06-14 17:59:43 UTC (rev 17160)
+++ trunk/packages/python-biopython/trunk/debian/rules	2014-06-14 19:46:10 UTC (rev 17161)
@@ -73,7 +73,9 @@
                              cp -a Doc/Tutorial.tex {build_dir}/Doc; \
                              cp -a Tests {build_dir}; \
                              cd {build_dir}/Tests; \
-                             env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=/tmp {interpreter} run_tests.py --offline'
+                             tmpdir=`mktemp -d` ; \
+                             env DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=$$tmpdir {interpreter} run_tests.py --offline' ; \
+                             rm -rf $$tmpdir
 	mv Tests_avoid/* Tests
 	rmdir Tests_avoid
 

Modified: trunk/packages/python-biopython/trunk/debian/tests/run-unit-test
===================================================================
--- trunk/packages/python-biopython/trunk/debian/tests/run-unit-test	2014-06-14 17:59:43 UTC (rev 17160)
+++ trunk/packages/python-biopython/trunk/debian/tests/run-unit-test	2014-06-14 19:46:10 UTC (rev 17161)
@@ -25,6 +25,6 @@
 # test_Emboss also requires to have the environment variable EMBOSS_ROOT set
 
 for pi in $(pyversions -i) $(py3versions -i); do
-    LC_ALL=C.UTF-8 DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=/tmp ${pi} run_tests.py --offline
+    LC_ALL=C.UTF-8 DIALIGN2_DIR=/usr/share/dialign EMBOSS_ROOT=/usr/lib/emboss HOME=$ADTTMP ${pi} run_tests.py --offline
 done