[med-svn] r17199 - trunk/packages/R/r-bioc-qvalue/trunk/debian

[Andreas Tille]

Author: tille
Date: 2014-06-17 07:43:07 +0000 (Tue, 17 Jun 2014)
New Revision: 17199

Removed:
   trunk/packages/R/r-bioc-qvalue/trunk/debian/get-orig-source
Modified:
   trunk/packages/R/r-bioc-qvalue/trunk/debian/changelog
   trunk/packages/R/r-bioc-qvalue/trunk/debian/copyright
   trunk/packages/R/r-bioc-qvalue/trunk/debian/rules
   trunk/packages/R/r-bioc-qvalue/trunk/debian/watch
Log:
use Files-Excluded to delete binary file without source


Modified: trunk/packages/R/r-bioc-qvalue/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-qvalue/trunk/debian/changelog	2014-06-17 07:36:20 UTC (rev 17198)
+++ trunk/packages/R/r-bioc-qvalue/trunk/debian/changelog	2014-06-17 07:43:07 UTC (rev 17199)
@@ -10,6 +10,7 @@
   * moved debian/upstream to debian/upstream/metadata
   * cme fix dpkg-control
   * debhelper 9
+  * use Files-Excluded to delete binary file without source
 
  -- Andreas Tille <tille at debian.org>  Tue, 17 Jun 2014 09:30:19 +0200
 

Modified: trunk/packages/R/r-bioc-qvalue/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-qvalue/trunk/debian/copyright	2014-06-17 07:36:20 UTC (rev 17198)
+++ trunk/packages/R/r-bioc-qvalue/trunk/debian/copyright	2014-06-17 07:43:07 UTC (rev 17199)
@@ -3,7 +3,7 @@
 Upstream-Contact: John D. Storey <jstorey at u.washington.edu>
 Source: http://www.bioconductor.org/packages/release/bioc/html/qvalue.html
 Files-Excluded:
-    manual.pdf
+    vignettes/manual.pdf
 
 Files: *
 Copyright: © 2006-2012 Alan Dabney and John D. Storey

Deleted: trunk/packages/R/r-bioc-qvalue/trunk/debian/get-orig-source
===================================================================
--- trunk/packages/R/r-bioc-qvalue/trunk/debian/get-orig-source	2014-06-17 07:36:20 UTC (rev 17198)
+++ trunk/packages/R/r-bioc-qvalue/trunk/debian/get-orig-source	2014-06-17 07:43:07 UTC (rev 17199)
@@ -1,25 +0,0 @@
-#!/bin/sh
-# Delete manual.pdf in upstream source because there is no source
-# and upstream did not responded when asking for it
-
-set -e
-NAME=`dpkg-parsechangelog | awk '/^Source/ { print $2 }'`
-UNAME=`echo ${NAME} | sed 's/^r-bioc-//'`
-
-if ! echo $@ | grep -q upstream-version ; then
-    VERSION=`dpkg-parsechangelog | awk '/^Version:/ { print $2 }' | sed 's/\([0-9\.]\+\)-[0-9]\+$/\1/'`
-else
-    VERSION=`echo $@ | sed "s?^.*--upstream-version \([0-9.]\+\) .*${UNAME}.*?\1?"`
-    if echo "$VERSION" | grep -q "upstream-version" ; then
-        echo "Unable to parse version number"
-        exit
-    fi
-fi
-
-mkdir -p ../tarballs
-cd ../tarballs
-tar xaf ../${UNAME}*.tar.gz
-find ${UNAME} -name manual.pdf -delete
-
-GZIP="--best --no-name" tar --owner=root --group=root --mode=a+rX -caf "$NAME"_"$VERSION".orig.tar.gz "${UNAME}"
-rm -rf "$UNAME"

Modified: trunk/packages/R/r-bioc-qvalue/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-bioc-qvalue/trunk/debian/rules	2014-06-17 07:36:20 UTC (rev 17198)
+++ trunk/packages/R/r-bioc-qvalue/trunk/debian/rules	2014-06-17 07:43:07 UTC (rev 17199)
@@ -8,3 +8,6 @@
 
 clean::
 	find . -name "*.pdf" -o -name "*.tex" -o -name "*-eps" -o -name "*.log" -o -name "*.ps" -o -name "*.txt" | xargs -r chmod -x
+
+get-orig-source:
+	uscan --verbose --force-download --repack --compression xz

Modified: trunk/packages/R/r-bioc-qvalue/trunk/debian/watch
===================================================================
--- trunk/packages/R/r-bioc-qvalue/trunk/debian/watch	2014-06-17 07:36:20 UTC (rev 17198)
+++ trunk/packages/R/r-bioc-qvalue/trunk/debian/watch	2014-06-17 07:43:07 UTC (rev 17199)
@@ -1,5 +1,4 @@
 version=3
-opts=downloadurlmangle=s/\.\./packages\/release\/bioc/,dversionmangle=s/[~\+]dfsg[0-9]*// \
+opts=downloadurlmangle=s/\.\./packages\/release\/bioc/,uversionmangle=s/$/+dfsg/ \
  http://www.bioconductor.org/packages/release/bioc/html/qvalue.html \
- .*/qvalue_([\d\.]+)\.tar\.gz \
- debian debian/get-orig-source
+ .*/qvalue_([\d\.]+)\.tar\.gz