[med-svn] r16438 - trunk/packages/python-biopython/trunk/debian

[Andreas Tille]

Author: tille
Date: 2014-03-12 21:33:53 +0000 (Wed, 12 Mar 2014)
New Revision: 16438

Modified:
   trunk/packages/python-biopython/trunk/debian/rules
Log:
Better documentation for the reasons why we exclude the database tests


Modified: trunk/packages/python-biopython/trunk/debian/rules
===================================================================
--- trunk/packages/python-biopython/trunk/debian/rules	2014-03-12 18:09:16 UTC (rev 16437)
+++ trunk/packages/python-biopython/trunk/debian/rules	2014-03-12 21:33:53 UTC (rev 16438)
@@ -24,15 +24,17 @@
 
 override_dh_auto_test:
 	# 1. avoid some tests which need online access
-	# 2. avoid PAML_tools and EmbossPhylipNew since paml resp. embassy-phylip are non-free
-	# 3. avoid testing tools that are not packaged for Debian yet
-	# 4. avoid amd64 only tools on other architectures
+	# 2. avoid tests needing a ready setup database server (MySQL and PostgreSQL
+	# 3. avoid PAML_tools and EmbossPhylipNew since paml resp. embassy-phylip are non-free
+	# 4. avoid testing tools that are not packaged for Debian yet
+	# 5. avoid amd64 only tools on other architectures
         # While 2. and 3. do not create errors there is no point in bloating
 	# the build log and this kind of documentation makes things more transparent
 	mkdir -p Tests_avoid
 	for avoid in \
 			Entrez_online HotRand NCBI_qblast SCOP_online SeqIO_online TogoWS \
-			PAML_tools EmbossPhylipNew BioSQL_MySQLdb BioSQL_psycopg2 \
+			BioSQL_MySQLdb BioSQL_psycopg2 \
+			PAML_tools EmbossPhylipNew \
 			MSAProbs_tool NACCESS_tool PopGen_DFDist PopGen_FDist PopGen_GenePop PopGen_GenePop_EasyController PopGen_SimCoal XXmotif_tool \
 			$(EXCLUDEBWA) \
 		    ; do \