[med-svn] [bedtools] annotated tag debian/2.19.1-1 created (now 899067e)

[Charles Plessy]

This is an automated email from the git hooks/post-receive script.

plessy pushed a change to annotated tag debian/2.19.1-1
in repository bedtools.

        at  899067e   (tag)
   tagging  883e83f733f06efdd871e210797ef218af3c79b7 (commit)
  replaces  debian/2.19.0-1
 tagged by  Charles Plessy
        on  Fri Mar 21 16:25:40 2014 +0900

- Log -----------------------------------------------------------------
bedtools (2.19.1-1) unstable; urgency=medium

  479e63b Merge tag 'v2.19.1' into debian/unstable

  [ Charles Plessy ]
  93a7cf1 Create autopkgtest testsuite and a new package bedtools-test.
  46183f8 debian/copyright: update path, correct license short name.
  4fd441a debian/rules: removed obsolete exception of compression.

  [ James McCoy ]
  b4fa8e1 Move debian/upstream to debian/upstream/metadata

 -- Charles Plessy <plessy at debian.org>  Fri, 21 Mar 2014 14:51:44 +0900
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Aaron Quinlan (5):
      Merge pull request #39 from nkindlon/master
      Merge pull request #41 from nkindlon/master
      Merge pull request #40 from theoryno3/master
      Merge pull request #43 from nkindlon/master
      Merge pull request #47 from nkindlon/master

Charles Plessy (10):
      Merge tag 'v2.19.1' into debian/unstable
      New upstream release; no new copyright nor license statements.
      Merge branch 'debian/unstable' of git+ssh://git.debian.org/git/debian-med/bedtools into debian/unstable
      Call bedtools via the BT variable, allowing to override the location.
      Access data via a DATA variable, allowing to override the location.
      Merge branch 'suggestion-for-testsuite' into debian/unstable
      Create autopkgtest testsuite and a new package bedtools-test.
      Removed exception of compression now that test files have been moved.
      Update path, correct license short name.
      bedtools (2.19.1-1) unstable; urgency=medium

James McCoy (1):
      Move debian/upstream to debian/upstream/metadata

Paul Rigor (1):
      added: mm10 mouse genome

arq5x (5):
      [DOC] multiple ops/cols allowed in a single map run. also, speed comparo.
      Setting Release-Version v2.19.1
      Setting Release-Version v2.19.1
      Setting Release-Version v2.19.1
      just peak at first bit in isGzipFile() fix for issue46

nkindlon (6):
      Created new KeyListOps class to replace vectorOps. Converted map tool to this.
      Refactored KeyListOps, Context, mapFile for KeyListOps re-usability by other tools.
      forgot main Makefile update.
      More unit tests, also fixed files messed up by previous merge attempt.
      Fixed intersect bug so that bed query with Bam DB correctly gives bed output. Added unit test.
      Fixed slop bug when slop factor exceeds MAX signed int.

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