[med-svn] r18176 - trunk/packages/libhmsbeagle/trunk/debian/patches

Andreas Tille tille at moszumanska.debian.org
Wed Oct 1 09:37:16 UTC 2014


Author: tille
Date: 2014-10-01 09:37:15 +0000 (Wed, 01 Oct 2014)
New Revision: 18176

Added:
   trunk/packages/libhmsbeagle/trunk/debian/patches/doxygen_update.patch
Modified:
   trunk/packages/libhmsbeagle/trunk/debian/patches/series
Log:
Forgot to commit one patch that was part of last upload


Added: trunk/packages/libhmsbeagle/trunk/debian/patches/doxygen_update.patch
===================================================================
--- trunk/packages/libhmsbeagle/trunk/debian/patches/doxygen_update.patch	                        (rev 0)
+++ trunk/packages/libhmsbeagle/trunk/debian/patches/doxygen_update.patch	2014-10-01 09:37:15 UTC (rev 18176)
@@ -0,0 +1,3186 @@
+--- libhmsbeagle-2.1.orig/beagle.dox
++++ libhmsbeagle-2.1/beagle.dox
+@@ -1,110 +1,119 @@
+-# Doxyfile 1.7.5.1
++# Doxyfile 1.8.5
+ 
+ # This file describes the settings to be used by the documentation system
+ # doxygen (www.doxygen.org) for a project.
+ #
+-# All text after a hash (#) is considered a comment and will be ignored.
++# All text after a double hash (##) is considered a comment and is placed in
++# front of the TAG it is preceding.
++#
++# All text after a single hash (#) is considered a comment and will be ignored.
+ # The format is:
+-#       TAG = value [value, ...]
+-# For lists items can also be appended using:
+-#       TAG += value [value, ...]
+-# Values that contain spaces should be placed between quotes (" ").
++# TAG = value [value, ...]
++# For lists, items can also be appended using:
++# TAG += value [value, ...]
++# Values that contain spaces should be placed between quotes (\" \").
+ 
+ #---------------------------------------------------------------------------
+ # Project related configuration options
+ #---------------------------------------------------------------------------
+ 
+ # This tag specifies the encoding used for all characters in the config file
+-# that follow. The default is UTF-8 which is also the encoding used for all
+-# text before the first occurrence of this tag. Doxygen uses libiconv (or the
+-# iconv built into libc) for the transcoding. See
+-# http://www.gnu.org/software/libiconv for the list of possible encodings.
++# that follow. The default is UTF-8 which is also the encoding used for all text
++# before the first occurrence of this tag. Doxygen uses libiconv (or the iconv
++# built into libc) for the transcoding. See http://www.gnu.org/software/libiconv
++# for the list of possible encodings.
++# The default value is: UTF-8.
+ 
+ DOXYFILE_ENCODING      = UTF-8
+ 
+-# The PROJECT_NAME tag is a single word (or sequence of words) that should
+-# identify the project. Note that if you do not use Doxywizard you need
+-# to put quotes around the project name if it contains spaces.
++# The PROJECT_NAME tag is a single word (or a sequence of words surrounded by
++# double-quotes, unless you are using Doxywizard) that should identify the
++# project for which the documentation is generated. This name is used in the
++# title of most generated pages and in a few other places.
++# The default value is: My Project.
+ 
+ PROJECT_NAME           = BEAGLE
+ 
+-# The PROJECT_NUMBER tag can be used to enter a project or revision number.
+-# This could be handy for archiving the generated documentation or
+-# if some version control system is used.
++# The PROJECT_NUMBER tag can be used to enter a project or revision number. This
++# could be handy for archiving the generated documentation or if some version
++# control system is used.
+ 
+ PROJECT_NUMBER         = $(VERSION)
+ 
+ # Using the PROJECT_BRIEF tag one can provide an optional one line description
+-# for a project that appears at the top of each page and should give viewer
+-# a quick idea about the purpose of the project. Keep the description short.
++# for a project that appears at the top of each page and should give viewer a
++# quick idea about the purpose of the project. Keep the description short.
+ 
+ PROJECT_BRIEF          = "An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics"
+ 
+-# With the PROJECT_LOGO tag one can specify an logo or icon that is
+-# included in the documentation. The maximum height of the logo should not
+-# exceed 55 pixels and the maximum width should not exceed 200 pixels.
+-# Doxygen will copy the logo to the output directory.
++# With the PROJECT_LOGO tag one can specify an logo or icon that is included in
++# the documentation. The maximum height of the logo should not exceed 55 pixels
++# and the maximum width should not exceed 200 pixels. Doxygen will copy the logo
++# to the output directory.
+ 
+ PROJECT_LOGO           = beagle-dox.png
+ 
+-# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
+-# base path where the generated documentation will be put.
+-# If a relative path is entered, it will be relative to the location
+-# where doxygen was started. If left blank the current directory will be used.
++# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) path
++# into which the generated documentation will be written. If a relative path is
++# entered, it will be relative to the location where doxygen was started. If
++# left blank the current directory will be used.
+ 
+ OUTPUT_DIRECTORY       = $(DOCDIR)
+ 
+-# If the CREATE_SUBDIRS tag is set to YES, then doxygen will create
+-# 4096 sub-directories (in 2 levels) under the output directory of each output
+-# format and will distribute the generated files over these directories.
+-# Enabling this option can be useful when feeding doxygen a huge amount of
+-# source files, where putting all generated files in the same directory would
+-# otherwise cause performance problems for the file system.
++# If the CREATE_SUBDIRS tag is set to YES, then doxygen will create 4096 sub-
++# directories (in 2 levels) under the output directory of each output format and
++# will distribute the generated files over these directories. Enabling this
++# option can be useful when feeding doxygen a huge amount of source files, where
++# putting all generated files in the same directory would otherwise causes
++# performance problems for the file system.
++# The default value is: NO.
+ 
+ CREATE_SUBDIRS         = NO
+ 
+ # The OUTPUT_LANGUAGE tag is used to specify the language in which all
+ # documentation generated by doxygen is written. Doxygen will use this
+ # information to generate all constant output in the proper language.
+-# The default language is English, other supported languages are:
+-# Afrikaans, Arabic, Brazilian, Catalan, Chinese, Chinese-Traditional,
+-# Croatian, Czech, Danish, Dutch, Esperanto, Farsi, Finnish, French, German,
+-# Greek, Hungarian, Italian, Japanese, Japanese-en (Japanese with English
+-# messages), Korean, Korean-en, Lithuanian, Norwegian, Macedonian, Persian,
+-# Polish, Portuguese, Romanian, Russian, Serbian, Serbian-Cyrillic, Slovak,
+-# Slovene, Spanish, Swedish, Ukrainian, and Vietnamese.
++# Possible values are: Afrikaans, Arabic, Brazilian, Catalan, Chinese, Chinese-
++# Traditional, Croatian, Czech, Danish, Dutch, English, Esperanto, Farsi,
++# Finnish, French, German, Greek, Hungarian, Italian, Japanese, Japanese-en,
++# Korean, Korean-en, Latvian, Norwegian, Macedonian, Persian, Polish,
++# Portuguese, Romanian, Russian, Serbian, Slovak, Slovene, Spanish, Swedish,
++# Turkish, Ukrainian and Vietnamese.
++# The default value is: English.
+ 
+ OUTPUT_LANGUAGE        = English
+ 
+-# If the BRIEF_MEMBER_DESC tag is set to YES (the default) Doxygen will
+-# include brief member descriptions after the members that are listed in
+-# the file and class documentation (similar to JavaDoc).
+-# Set to NO to disable this.
++# If the BRIEF_MEMBER_DESC tag is set to YES doxygen will include brief member
++# descriptions after the members that are listed in the file and class
++# documentation (similar to Javadoc). Set to NO to disable this.
++# The default value is: YES.
+ 
+ BRIEF_MEMBER_DESC      = YES
+ 
+-# If the REPEAT_BRIEF tag is set to YES (the default) Doxygen will prepend
+-# the brief description of a member or function before the detailed description.
+-# Note: if both HIDE_UNDOC_MEMBERS and BRIEF_MEMBER_DESC are set to NO, the
++# If the REPEAT_BRIEF tag is set to YES doxygen will prepend the brief
++# description of a member or function before the detailed description
++#
++# Note: If both HIDE_UNDOC_MEMBERS and BRIEF_MEMBER_DESC are set to NO, the
+ # brief descriptions will be completely suppressed.
++# The default value is: YES.
+ 
+ REPEAT_BRIEF           = YES
+ 
+-# This tag implements a quasi-intelligent brief description abbreviator
+-# that is used to form the text in various listings. Each string
+-# in this list, if found as the leading text of the brief description, will be
+-# stripped from the text and the result after processing the whole list, is
+-# used as the annotated text. Otherwise, the brief description is used as-is.
+-# If left blank, the following values are used ("$name" is automatically
+-# replaced with the name of the entity): "The $name class" "The $name widget"
+-# "The $name file" "is" "provides" "specifies" "contains"
+-# "represents" "a" "an" "the"
++# This tag implements a quasi-intelligent brief description abbreviator that is
++# used to form the text in various listings. Each string in this list, if found
++# as the leading text of the brief description, will be stripped from the text
++# and the result, after processing the whole list, is used as the annotated
++# text. Otherwise, the brief description is used as-is. If left blank, the
++# following values are used ($name is automatically replaced with the name of
++# the entity):The $name class, The $name widget, The $name file, is, provides,
++# specifies, contains, represents, a, an and the.
+ 
+ ABBREVIATE_BRIEF       =
+ 
+ # If the ALWAYS_DETAILED_SEC and REPEAT_BRIEF tags are both set to YES then
+-# Doxygen will generate a detailed section even if there is only a brief
++# doxygen will generate a detailed section even if there is only a brief
+ # description.
++# The default value is: NO.
+ 
+ ALWAYS_DETAILED_SEC    = NO
+ 
+@@ -112,153 +121,204 @@
+ # inherited members of a class in the documentation of that class as if those
+ # members were ordinary class members. Constructors, destructors and assignment
+ # operators of the base classes will not be shown.
++# The default value is: NO.
+ 
+ INLINE_INHERITED_MEMB  = NO
+ 
+-# If the FULL_PATH_NAMES tag is set to YES then Doxygen will prepend the full
+-# path before files name in the file list and in the header files. If set
+-# to NO the shortest path that makes the file name unique will be used.
++# If the FULL_PATH_NAMES tag is set to YES doxygen will prepend the full path
++# before files name in the file list and in the header files. If set to NO the
++# shortest path that makes the file name unique will be used
++# The default value is: YES.
+ 
+ FULL_PATH_NAMES        = YES
+ 
+-# If the FULL_PATH_NAMES tag is set to YES then the STRIP_FROM_PATH tag
+-# can be used to strip a user-defined part of the path. Stripping is
+-# only done if one of the specified strings matches the left-hand part of
+-# the path. The tag can be used to show relative paths in the file list.
+-# If left blank the directory from which doxygen is run is used as the
+-# path to strip.
++# The STRIP_FROM_PATH tag can be used to strip a user-defined part of the path.
++# Stripping is only done if one of the specified strings matches the left-hand
++# part of the path. The tag can be used to show relative paths in the file list.
++# If left blank the directory from which doxygen is run is used as the path to
++# strip.
++#
++# Note that you can specify absolute paths here, but also relative paths, which
++# will be relative from the directory where doxygen is started.
++# This tag requires that the tag FULL_PATH_NAMES is set to YES.
+ 
+ STRIP_FROM_PATH        =
+ 
+-# The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of
+-# the path mentioned in the documentation of a class, which tells
+-# the reader which header file to include in order to use a class.
+-# If left blank only the name of the header file containing the class
+-# definition is used. Otherwise one should specify the include paths that
+-# are normally passed to the compiler using the -I flag.
++# The STRIP_FROM_INC_PATH tag can be used to strip a user-defined part of the
++# path mentioned in the documentation of a class, which tells the reader which
++# header file to include in order to use a class. If left blank only the name of
++# the header file containing the class definition is used. Otherwise one should
++# specify the list of include paths that are normally passed to the compiler
++# using the -I flag.
+ 
+ STRIP_FROM_INC_PATH    =
+ 
+-# If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter
+-# (but less readable) file names. This can be useful if your file system
+-# doesn't support long names like on DOS, Mac, or CD-ROM.
++# If the SHORT_NAMES tag is set to YES, doxygen will generate much shorter (but
++# less readable) file names. This can be useful is your file systems doesn't
++# support long names like on DOS, Mac, or CD-ROM.
++# The default value is: NO.
+ 
+ SHORT_NAMES            = NO
+ 
+-# If the JAVADOC_AUTOBRIEF tag is set to YES then Doxygen
+-# will interpret the first line (until the first dot) of a JavaDoc-style
+-# comment as the brief description. If set to NO, the JavaDoc
+-# comments will behave just like regular Qt-style comments
+-# (thus requiring an explicit @brief command for a brief description.)
++# If the JAVADOC_AUTOBRIEF tag is set to YES then doxygen will interpret the
++# first line (until the first dot) of a Javadoc-style comment as the brief
++# description. If set to NO, the Javadoc-style will behave just like regular Qt-
++# style comments (thus requiring an explicit @brief command for a brief
++# description.)
++# The default value is: NO.
+ 
+ JAVADOC_AUTOBRIEF      = NO
+ 
+-# If the QT_AUTOBRIEF tag is set to YES then Doxygen will
+-# interpret the first line (until the first dot) of a Qt-style
+-# comment as the brief description. If set to NO, the comments
+-# will behave just like regular Qt-style comments (thus requiring
+-# an explicit \brief command for a brief description.)
++# If the QT_AUTOBRIEF tag is set to YES then doxygen will interpret the first
++# line (until the first dot) of a Qt-style comment as the brief description. If
++# set to NO, the Qt-style will behave just like regular Qt-style comments (thus
++# requiring an explicit \brief command for a brief description.)
++# The default value is: NO.
+ 
+ QT_AUTOBRIEF           = NO
+ 
+-# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make Doxygen
+-# treat a multi-line C++ special comment block (i.e. a block of //! or ///
+-# comments) as a brief description. This used to be the default behaviour.
+-# The new default is to treat a multi-line C++ comment block as a detailed
+-# description. Set this tag to YES if you prefer the old behaviour instead.
++# The MULTILINE_CPP_IS_BRIEF tag can be set to YES to make doxygen treat a
++# multi-line C++ special comment block (i.e. a block of //! or /// comments) as
++# a brief description. This used to be the default behavior. The new default is
++# to treat a multi-line C++ comment block as a detailed description. Set this
++# tag to YES if you prefer the old behavior instead.
++#
++# Note that setting this tag to YES also means that rational rose comments are
++# not recognized any more.
++# The default value is: NO.
+ 
+ MULTILINE_CPP_IS_BRIEF = NO
+ 
+-# If the INHERIT_DOCS tag is set to YES (the default) then an undocumented
+-# member inherits the documentation from any documented member that it
+-# re-implements.
++# If the INHERIT_DOCS tag is set to YES then an undocumented member inherits the
++# documentation from any documented member that it re-implements.
++# The default value is: YES.
+ 
+ INHERIT_DOCS           = YES
+ 
+-# If the SEPARATE_MEMBER_PAGES tag is set to YES, then doxygen will produce
+-# a new page for each member. If set to NO, the documentation of a member will
+-# be part of the file/class/namespace that contains it.
++# If the SEPARATE_MEMBER_PAGES tag is set to YES, then doxygen will produce a
++# new page for each member. If set to NO, the documentation of a member will be
++# part of the file/class/namespace that contains it.
++# The default value is: NO.
+ 
+ SEPARATE_MEMBER_PAGES  = NO
+ 
+-# The TAB_SIZE tag can be used to set the number of spaces in a tab.
+-# Doxygen uses this value to replace tabs by spaces in code fragments.
++# The TAB_SIZE tag can be used to set the number of spaces in a tab. Doxygen
++# uses this value to replace tabs by spaces in code fragments.
++# Minimum value: 1, maximum value: 16, default value: 4.
+ 
+ TAB_SIZE               = 8
+ 
+-# This tag can be used to specify a number of aliases that acts
+-# as commands in the documentation. An alias has the form "name=value".
+-# For example adding "sideeffect=\par Side Effects:\n" will allow you to
+-# put the command \sideeffect (or @sideeffect) in the documentation, which
+-# will result in a user-defined paragraph with heading "Side Effects:".
+-# You can put \n's in the value part of an alias to insert newlines.
++# This tag can be used to specify a number of aliases that act as commands in
++# the documentation. An alias has the form:
++# name=value
++# For example adding
++# "sideeffect=@par Side Effects:\n"
++# will allow you to put the command \sideeffect (or @sideeffect) in the
++# documentation, which will result in a user-defined paragraph with heading
++# "Side Effects:". You can put \n's in the value part of an alias to insert
++# newlines.
+ 
+ ALIASES                =
+ 
+-# Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C
+-# sources only. Doxygen will then generate output that is more tailored for C.
+-# For instance, some of the names that are used will be different. The list
+-# of all members will be omitted, etc.
++# This tag can be used to specify a number of word-keyword mappings (TCL only).
++# A mapping has the form "name=value". For example adding "class=itcl::class"
++# will allow you to use the command class in the itcl::class meaning.
++
++TCL_SUBST              =
++
++# Set the OPTIMIZE_OUTPUT_FOR_C tag to YES if your project consists of C sources
++# only. Doxygen will then generate output that is more tailored for C. For
++# instance, some of the names that are used will be different. The list of all
++# members will be omitted, etc.
++# The default value is: NO.
+ 
+ OPTIMIZE_OUTPUT_FOR_C  = NO
+ 
+-# Set the OPTIMIZE_OUTPUT_JAVA tag to YES if your project consists of Java
+-# sources only. Doxygen will then generate output that is more tailored for
+-# Java. For instance, namespaces will be presented as packages, qualified
+-# scopes will look different, etc.
++# Set the OPTIMIZE_OUTPUT_JAVA tag to YES if your project consists of Java or
++# Python sources only. Doxygen will then generate output that is more tailored
++# for that language. For instance, namespaces will be presented as packages,
++# qualified scopes will look different, etc.
++# The default value is: NO.
+ 
+ OPTIMIZE_OUTPUT_JAVA   = NO
+ 
+ # Set the OPTIMIZE_FOR_FORTRAN tag to YES if your project consists of Fortran
+-# sources only. Doxygen will then generate output that is more tailored for
+-# Fortran.
++# sources. Doxygen will then generate output that is tailored for Fortran.
++# The default value is: NO.
+ 
+ OPTIMIZE_FOR_FORTRAN   = NO
+ 
+ # Set the OPTIMIZE_OUTPUT_VHDL tag to YES if your project consists of VHDL
+-# sources. Doxygen will then generate output that is tailored for
+-# VHDL.
++# sources. Doxygen will then generate output that is tailored for VHDL.
++# The default value is: NO.
+ 
+ OPTIMIZE_OUTPUT_VHDL   = NO
+ 
+ # Doxygen selects the parser to use depending on the extension of the files it
+-# parses. With this tag you can assign which parser to use for a given extension.
+-# Doxygen has a built-in mapping, but you can override or extend it using this
+-# tag. The format is ext=language, where ext is a file extension, and language
+-# is one of the parsers supported by doxygen: IDL, Java, Javascript, CSharp, C,
+-# C++, D, PHP, Objective-C, Python, Fortran, VHDL, C, C++. For instance to make
++# parses. With this tag you can assign which parser to use for a given
++# extension. Doxygen has a built-in mapping, but you can override or extend it
++# using this tag. The format is ext=language, where ext is a file extension, and
++# language is one of the parsers supported by doxygen: IDL, Java, Javascript,
++# C#, C, C++, D, PHP, Objective-C, Python, Fortran, VHDL. For instance to make
+ # doxygen treat .inc files as Fortran files (default is PHP), and .f files as C
+-# (default is Fortran), use: inc=Fortran f=C. Note that for custom extensions
+-# you also need to set FILE_PATTERNS otherwise the files are not read by doxygen.
++# (default is Fortran), use: inc=Fortran f=C.
++#
++# Note For files without extension you can use no_extension as a placeholder.
++#
++# Note that for custom extensions you also need to set FILE_PATTERNS otherwise
++# the files are not read by doxygen.
+ 
+ EXTENSION_MAPPING      =
+ 
++# If the MARKDOWN_SUPPORT tag is enabled then doxygen pre-processes all comments
++# according to the Markdown format, which allows for more readable
++# documentation. See http://daringfireball.net/projects/markdown/ for details.
++# The output of markdown processing is further processed by doxygen, so you can
++# mix doxygen, HTML, and XML commands with Markdown formatting. Disable only in
++# case of backward compatibilities issues.
++# The default value is: YES.
++
++MARKDOWN_SUPPORT       = YES
++
++# When enabled doxygen tries to link words that correspond to documented
++# classes, or namespaces to their corresponding documentation. Such a link can
++# be prevented in individual cases by by putting a % sign in front of the word
++# or globally by setting AUTOLINK_SUPPORT to NO.
++# The default value is: YES.
++
++AUTOLINK_SUPPORT       = YES
++
+ # If you use STL classes (i.e. std::string, std::vector, etc.) but do not want
+-# to include (a tag file for) the STL sources as input, then you should
+-# set this tag to YES in order to let doxygen match functions declarations and
+-# definitions whose arguments contain STL classes (e.g. func(std::string); v.s.
+-# func(std::string) {}). This also makes the inheritance and collaboration
++# to include (a tag file for) the STL sources as input, then you should set this
++# tag to YES in order to let doxygen match functions declarations and
++# definitions whose arguments contain STL classes (e.g. func(std::string);
++# versus func(std::string) {}). This also make the inheritance and collaboration
+ # diagrams that involve STL classes more complete and accurate.
++# The default value is: NO.
+ 
+ BUILTIN_STL_SUPPORT    = NO
+ 
+ # If you use Microsoft's C++/CLI language, you should set this option to YES to
+ # enable parsing support.
++# The default value is: NO.
+ 
+ CPP_CLI_SUPPORT        = NO
+ 
+-# Set the SIP_SUPPORT tag to YES if your project consists of sip sources only.
+-# Doxygen will parse them like normal C++ but will assume all classes use public
+-# instead of private inheritance when no explicit protection keyword is present.
++# Set the SIP_SUPPORT tag to YES if your project consists of sip (see:
++# http://www.riverbankcomputing.co.uk/software/sip/intro) sources only. Doxygen
++# will parse them like normal C++ but will assume all classes use public instead
++# of private inheritance when no explicit protection keyword is present.
++# The default value is: NO.
+ 
+ SIP_SUPPORT            = NO
+ 
+-# For Microsoft's IDL there are propget and propput attributes to indicate getter
+-# and setter methods for a property. Setting this option to YES (the default)
+-# will make doxygen replace the get and set methods by a property in the
+-# documentation. This will only work if the methods are indeed getting or
+-# setting a simple type. If this is not the case, or you want to show the
+-# methods anyway, you should set this option to NO.
++# For Microsoft's IDL there are propget and propput attributes to indicate
++# getter and setter methods for a property. Setting this option to YES will make
++# doxygen to replace the get and set methods by a property in the documentation.
++# This will only work if the methods are indeed getting or setting a simple
++# type. If this is not the case, or you want to show the methods anyway, you
++# should set this option to NO.
++# The default value is: YES.
+ 
+ IDL_PROPERTY_SUPPORT   = YES
+ 
+@@ -266,413 +326,463 @@
+ # tag is set to YES, then doxygen will reuse the documentation of the first
+ # member in the group (if any) for the other members of the group. By default
+ # all members of a group must be documented explicitly.
++# The default value is: NO.
+ 
+ DISTRIBUTE_GROUP_DOC   = NO
+ 
+-# Set the SUBGROUPING tag to YES (the default) to allow class member groups of
+-# the same type (for instance a group of public functions) to be put as a
+-# subgroup of that type (e.g. under the Public Functions section). Set it to
+-# NO to prevent subgrouping. Alternatively, this can be done per class using
+-# the \nosubgrouping command.
++# Set the SUBGROUPING tag to YES to allow class member groups of the same type
++# (for instance a group of public functions) to be put as a subgroup of that
++# type (e.g. under the Public Functions section). Set it to NO to prevent
++# subgrouping. Alternatively, this can be done per class using the
++# \nosubgrouping command.
++# The default value is: YES.
+ 
+ SUBGROUPING            = YES
+ 
+-# When the INLINE_GROUPED_CLASSES tag is set to YES, classes, structs and
+-# unions are shown inside the group in which they are included (e.g. using
+-# @ingroup) instead of on a separate page (for HTML and Man pages) or
+-# section (for LaTeX and RTF).
++# When the INLINE_GROUPED_CLASSES tag is set to YES, classes, structs and unions
++# are shown inside the group in which they are included (e.g. using \ingroup)
++# instead of on a separate page (for HTML and Man pages) or section (for LaTeX
++# and RTF).
++#
++# Note that this feature does not work in combination with
++# SEPARATE_MEMBER_PAGES.
++# The default value is: NO.
+ 
+ INLINE_GROUPED_CLASSES = NO
+ 
+-# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and
+-# unions with only public data fields will be shown inline in the documentation
+-# of the scope in which they are defined (i.e. file, namespace, or group
+-# documentation), provided this scope is documented. If set to NO (the default),
+-# structs, classes, and unions are shown on a separate page (for HTML and Man
+-# pages) or section (for LaTeX and RTF).
++# When the INLINE_SIMPLE_STRUCTS tag is set to YES, structs, classes, and unions
++# with only public data fields or simple typedef fields will be shown inline in
++# the documentation of the scope in which they are defined (i.e. file,
++# namespace, or group documentation), provided this scope is documented. If set
++# to NO, structs, classes, and unions are shown on a separate page (for HTML and
++# Man pages) or section (for LaTeX and RTF).
++# The default value is: NO.
+ 
+ INLINE_SIMPLE_STRUCTS  = NO
+ 
+-# When TYPEDEF_HIDES_STRUCT is enabled, a typedef of a struct, union, or enum
+-# is documented as struct, union, or enum with the name of the typedef. So
++# When TYPEDEF_HIDES_STRUCT tag is enabled, a typedef of a struct, union, or
++# enum is documented as struct, union, or enum with the name of the typedef. So
+ # typedef struct TypeS {} TypeT, will appear in the documentation as a struct
+ # with name TypeT. When disabled the typedef will appear as a member of a file,
+-# namespace, or class. And the struct will be named TypeS. This can typically
+-# be useful for C code in case the coding convention dictates that all compound
++# namespace, or class. And the struct will be named TypeS. This can typically be
++# useful for C code in case the coding convention dictates that all compound
+ # types are typedef'ed and only the typedef is referenced, never the tag name.
++# The default value is: NO.
+ 
+ TYPEDEF_HIDES_STRUCT   = NO
+ 
+-# The SYMBOL_CACHE_SIZE determines the size of the internal cache use to
+-# determine which symbols to keep in memory and which to flush to disk.
+-# When the cache is full, less often used symbols will be written to disk.
+-# For small to medium size projects (<1000 input files) the default value is
+-# probably good enough. For larger projects a too small cache size can cause
+-# doxygen to be busy swapping symbols to and from disk most of the time
+-# causing a significant performance penalty.
+-# If the system has enough physical memory increasing the cache will improve the
+-# performance by keeping more symbols in memory. Note that the value works on
+-# a logarithmic scale so increasing the size by one will roughly double the
+-# memory usage. The cache size is given by this formula:
+-# 2^(16+SYMBOL_CACHE_SIZE). The valid range is 0..9, the default is 0,
+-# corresponding to a cache size of 2^16 = 65536 symbols
++# The size of the symbol lookup cache can be set using LOOKUP_CACHE_SIZE. This
++# cache is used to resolve symbols given their name and scope. Since this can be
++# an expensive process and often the same symbol appears multiple times in the
++# code, doxygen keeps a cache of pre-resolved symbols. If the cache is too small
++# doxygen will become slower. If the cache is too large, memory is wasted. The
++# cache size is given by this formula: 2^(16+LOOKUP_CACHE_SIZE). The valid range
++# is 0..9, the default is 0, corresponding to a cache size of 2^16=65536
++# symbols. At the end of a run doxygen will report the cache usage and suggest
++# the optimal cache size from a speed point of view.
++# Minimum value: 0, maximum value: 9, default value: 0.
+ 
+-SYMBOL_CACHE_SIZE      = 0
++LOOKUP_CACHE_SIZE      = 0
+ 
+ #---------------------------------------------------------------------------
+ # Build related configuration options
+ #---------------------------------------------------------------------------
+ 
+ # If the EXTRACT_ALL tag is set to YES doxygen will assume all entities in
+-# documentation are documented, even if no documentation was available.
+-# Private class members and static file members will be hidden unless
+-# the EXTRACT_PRIVATE and EXTRACT_STATIC tags are set to YES
++# documentation are documented, even if no documentation was available. Private
++# class members and static file members will be hidden unless the
++# EXTRACT_PRIVATE respectively EXTRACT_STATIC tags are set to YES.
++# Note: This will also disable the warnings about undocumented members that are
++# normally produced when WARNINGS is set to YES.
++# The default value is: NO.
+ 
+ EXTRACT_ALL            = NO
+ 
+-# If the EXTRACT_PRIVATE tag is set to YES all private members of a class
+-# will be included in the documentation.
++# If the EXTRACT_PRIVATE tag is set to YES all private members of a class will
++# be included in the documentation.
++# The default value is: NO.
+ 
+ EXTRACT_PRIVATE        = NO
+ 
+-# If the EXTRACT_STATIC tag is set to YES all static members of a file
+-# will be included in the documentation.
++# If the EXTRACT_PACKAGE tag is set to YES all members with package or internal
++# scope will be included in the documentation.
++# The default value is: NO.
++
++EXTRACT_PACKAGE        = NO
++
++# If the EXTRACT_STATIC tag is set to YES all static members of a file will be
++# included in the documentation.
++# The default value is: NO.
+ 
+ EXTRACT_STATIC         = NO
+ 
+-# If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs)
+-# defined locally in source files will be included in the documentation.
+-# If set to NO only classes defined in header files are included.
++# If the EXTRACT_LOCAL_CLASSES tag is set to YES classes (and structs) defined
++# locally in source files will be included in the documentation. If set to NO
++# only classes defined in header files are included. Does not have any effect
++# for Java sources.
++# The default value is: YES.
+ 
+ EXTRACT_LOCAL_CLASSES  = YES
+ 
+-# This flag is only useful for Objective-C code. When set to YES local
+-# methods, which are defined in the implementation section but not in
+-# the interface are included in the documentation.
+-# If set to NO (the default) only methods in the interface are included.
++# This flag is only useful for Objective-C code. When set to YES local methods,
++# which are defined in the implementation section but not in the interface are
++# included in the documentation. If set to NO only methods in the interface are
++# included.
++# The default value is: NO.
+ 
+ EXTRACT_LOCAL_METHODS  = NO
+ 
+ # If this flag is set to YES, the members of anonymous namespaces will be
+ # extracted and appear in the documentation as a namespace called
+-# 'anonymous_namespace{file}', where file will be replaced with the base
+-# name of the file that contains the anonymous namespace. By default
+-# anonymous namespaces are hidden.
++# 'anonymous_namespace{file}', where file will be replaced with the base name of
++# the file that contains the anonymous namespace. By default anonymous namespace
++# are hidden.
++# The default value is: NO.
+ 
+ EXTRACT_ANON_NSPACES   = NO
+ 
+-# If the HIDE_UNDOC_MEMBERS tag is set to YES, Doxygen will hide all
+-# undocumented members of documented classes, files or namespaces.
+-# If set to NO (the default) these members will be included in the
+-# various overviews, but no documentation section is generated.
+-# This option has no effect if EXTRACT_ALL is enabled.
++# If the HIDE_UNDOC_MEMBERS tag is set to YES, doxygen will hide all
++# undocumented members inside documented classes or files. If set to NO these
++# members will be included in the various overviews, but no documentation
++# section is generated. This option has no effect if EXTRACT_ALL is enabled.
++# The default value is: NO.
+ 
+ HIDE_UNDOC_MEMBERS     = NO
+ 
+-# If the HIDE_UNDOC_CLASSES tag is set to YES, Doxygen will hide all
+-# undocumented classes that are normally visible in the class hierarchy.
+-# If set to NO (the default) these classes will be included in the various
+-# overviews. This option has no effect if EXTRACT_ALL is enabled.
++# If the HIDE_UNDOC_CLASSES tag is set to YES, doxygen will hide all
++# undocumented classes that are normally visible in the class hierarchy. If set
++# to NO these classes will be included in the various overviews. This option has
++# no effect if EXTRACT_ALL is enabled.
++# The default value is: NO.
+ 
+ HIDE_UNDOC_CLASSES     = NO
+ 
+-# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, Doxygen will hide all
+-# friend (class|struct|union) declarations.
+-# If set to NO (the default) these declarations will be included in the
+-# documentation.
++# If the HIDE_FRIEND_COMPOUNDS tag is set to YES, doxygen will hide all friend
++# (class|struct|union) declarations. If set to NO these declarations will be
++# included in the documentation.
++# The default value is: NO.
+ 
+ HIDE_FRIEND_COMPOUNDS  = NO
+ 
+-# If the HIDE_IN_BODY_DOCS tag is set to YES, Doxygen will hide any
+-# documentation blocks found inside the body of a function.
+-# If set to NO (the default) these blocks will be appended to the
+-# function's detailed documentation block.
++# If the HIDE_IN_BODY_DOCS tag is set to YES, doxygen will hide any
++# documentation blocks found inside the body of a function. If set to NO these
++# blocks will be appended to the function's detailed documentation block.
++# The default value is: NO.
+ 
+ HIDE_IN_BODY_DOCS      = NO
+ 
+-# The INTERNAL_DOCS tag determines if documentation
+-# that is typed after a \internal command is included. If the tag is set
+-# to NO (the default) then the documentation will be excluded.
+-# Set it to YES to include the internal documentation.
++# The INTERNAL_DOCS tag determines if documentation that is typed after a
++# \internal command is included. If the tag is set to NO then the documentation
++# will be excluded. Set it to YES to include the internal documentation.
++# The default value is: NO.
+ 
+ INTERNAL_DOCS          = NO
+ 
+-# If the CASE_SENSE_NAMES tag is set to NO then Doxygen will only generate
+-# file names in lower-case letters. If set to YES upper-case letters are also
++# If the CASE_SENSE_NAMES tag is set to NO then doxygen will only generate file
++# names in lower-case letters. If set to YES upper-case letters are also
+ # allowed. This is useful if you have classes or files whose names only differ
+ # in case and if your file system supports case sensitive file names. Windows
+ # and Mac users are advised to set this option to NO.
++# The default value is: system dependent.
+ 
+ CASE_SENSE_NAMES       = NO
+ 
+-# If the HIDE_SCOPE_NAMES tag is set to NO (the default) then Doxygen
+-# will show members with their full class and namespace scopes in the
+-# documentation. If set to YES the scope will be hidden.
++# If the HIDE_SCOPE_NAMES tag is set to NO then doxygen will show members with
++# their full class and namespace scopes in the documentation. If set to YES the
++# scope will be hidden.
++# The default value is: NO.
+ 
+ HIDE_SCOPE_NAMES       = NO
+ 
+-# If the SHOW_INCLUDE_FILES tag is set to YES (the default) then Doxygen
+-# will put a list of the files that are included by a file in the documentation
+-# of that file.
++# If the SHOW_INCLUDE_FILES tag is set to YES then doxygen will put a list of
++# the files that are included by a file in the documentation of that file.
++# The default value is: YES.
+ 
+ SHOW_INCLUDE_FILES     = YES
+ 
+-# If the FORCE_LOCAL_INCLUDES tag is set to YES then Doxygen
+-# will list include files with double quotes in the documentation
+-# rather than with sharp brackets.
++# If the FORCE_LOCAL_INCLUDES tag is set to YES then doxygen will list include
++# files with double quotes in the documentation rather than with sharp brackets.
++# The default value is: NO.
+ 
+ FORCE_LOCAL_INCLUDES   = NO
+ 
+-# If the INLINE_INFO tag is set to YES (the default) then a tag [inline]
+-# is inserted in the documentation for inline members.
++# If the INLINE_INFO tag is set to YES then a tag [inline] is inserted in the
++# documentation for inline members.
++# The default value is: YES.
+ 
+ INLINE_INFO            = YES
+ 
+-# If the SORT_MEMBER_DOCS tag is set to YES (the default) then doxygen
+-# will sort the (detailed) documentation of file and class members
+-# alphabetically by member name. If set to NO the members will appear in
+-# declaration order.
++# If the SORT_MEMBER_DOCS tag is set to YES then doxygen will sort the
++# (detailed) documentation of file and class members alphabetically by member
++# name. If set to NO the members will appear in declaration order.
++# The default value is: YES.
+ 
+ SORT_MEMBER_DOCS       = YES
+ 
+-# If the SORT_BRIEF_DOCS tag is set to YES then doxygen will sort the
+-# brief documentation of file, namespace and class members alphabetically
+-# by member name. If set to NO (the default) the members will appear in
+-# declaration order.
++# If the SORT_BRIEF_DOCS tag is set to YES then doxygen will sort the brief
++# descriptions of file, namespace and class members alphabetically by member
++# name. If set to NO the members will appear in declaration order.
++# The default value is: NO.
+ 
+ SORT_BRIEF_DOCS        = NO
+ 
+-# If the SORT_MEMBERS_CTORS_1ST tag is set to YES then doxygen
+-# will sort the (brief and detailed) documentation of class members so that
+-# constructors and destructors are listed first. If set to NO (the default)
+-# the constructors will appear in the respective orders defined by
+-# SORT_MEMBER_DOCS and SORT_BRIEF_DOCS.
+-# This tag will be ignored for brief docs if SORT_BRIEF_DOCS is set to NO
+-# and ignored for detailed docs if SORT_MEMBER_DOCS is set to NO.
++# If the SORT_MEMBERS_CTORS_1ST tag is set to YES then doxygen will sort the
++# (brief and detailed) documentation of class members so that constructors and
++# destructors are listed first. If set to NO the constructors will appear in the
++# respective orders defined by SORT_BRIEF_DOCS and SORT_MEMBER_DOCS.
++# Note: If SORT_BRIEF_DOCS is set to NO this option is ignored for sorting brief
++# member documentation.
++# Note: If SORT_MEMBER_DOCS is set to NO this option is ignored for sorting
++# detailed member documentation.
++# The default value is: NO.
+ 
+ SORT_MEMBERS_CTORS_1ST = NO
+ 
+-# If the SORT_GROUP_NAMES tag is set to YES then doxygen will sort the
+-# hierarchy of group names into alphabetical order. If set to NO (the default)
+-# the group names will appear in their defined order.
++# If the SORT_GROUP_NAMES tag is set to YES then doxygen will sort the hierarchy
++# of group names into alphabetical order. If set to NO the group names will
++# appear in their defined order.
++# The default value is: NO.
+ 
+ SORT_GROUP_NAMES       = NO
+ 
+-# If the SORT_BY_SCOPE_NAME tag is set to YES, the class list will be
+-# sorted by fully-qualified names, including namespaces. If set to
+-# NO (the default), the class list will be sorted only by class name,
+-# not including the namespace part.
++# If the SORT_BY_SCOPE_NAME tag is set to YES, the class list will be sorted by
++# fully-qualified names, including namespaces. If set to NO, the class list will
++# be sorted only by class name, not including the namespace part.
+ # Note: This option is not very useful if HIDE_SCOPE_NAMES is set to YES.
+-# Note: This option applies only to the class list, not to the
+-# alphabetical list.
++# Note: This option applies only to the class list, not to the alphabetical
++# list.
++# The default value is: NO.
+ 
+ SORT_BY_SCOPE_NAME     = NO
+ 
+-# If the STRICT_PROTO_MATCHING option is enabled and doxygen fails to
+-# do proper type resolution of all parameters of a function it will reject a
+-# match between the prototype and the implementation of a member function even
+-# if there is only one candidate or it is obvious which candidate to choose
+-# by doing a simple string match. By disabling STRICT_PROTO_MATCHING doxygen
+-# will still accept a match between prototype and implementation in such cases.
++# If the STRICT_PROTO_MATCHING option is enabled and doxygen fails to do proper
++# type resolution of all parameters of a function it will reject a match between
++# the prototype and the implementation of a member function even if there is
++# only one candidate or it is obvious which candidate to choose by doing a
++# simple string match. By disabling STRICT_PROTO_MATCHING doxygen will still
++# accept a match between prototype and implementation in such cases.
++# The default value is: NO.
+ 
+ STRICT_PROTO_MATCHING  = NO
+ 
+-# The GENERATE_TODOLIST tag can be used to enable (YES) or
+-# disable (NO) the todo list. This list is created by putting \todo
+-# commands in the documentation.
++# The GENERATE_TODOLIST tag can be used to enable ( YES) or disable ( NO) the
++# todo list. This list is created by putting \todo commands in the
++# documentation.
++# The default value is: YES.
+ 
+ GENERATE_TODOLIST      = YES
+ 
+-# The GENERATE_TESTLIST tag can be used to enable (YES) or
+-# disable (NO) the test list. This list is created by putting \test
+-# commands in the documentation.
++# The GENERATE_TESTLIST tag can be used to enable ( YES) or disable ( NO) the
++# test list. This list is created by putting \test commands in the
++# documentation.
++# The default value is: YES.
+ 
+ GENERATE_TESTLIST      = YES
+ 
+-# The GENERATE_BUGLIST tag can be used to enable (YES) or
+-# disable (NO) the bug list. This list is created by putting \bug
+-# commands in the documentation.
++# The GENERATE_BUGLIST tag can be used to enable ( YES) or disable ( NO) the bug
++# list. This list is created by putting \bug commands in the documentation.
++# The default value is: YES.
+ 
+ GENERATE_BUGLIST       = YES
+ 
+-# The GENERATE_DEPRECATEDLIST tag can be used to enable (YES) or
+-# disable (NO) the deprecated list. This list is created by putting
+-# \deprecated commands in the documentation.
++# The GENERATE_DEPRECATEDLIST tag can be used to enable ( YES) or disable ( NO)
++# the deprecated list. This list is created by putting \deprecated commands in
++# the documentation.
++# The default value is: YES.
+ 
+ GENERATE_DEPRECATEDLIST= YES
+ 
+-# The ENABLED_SECTIONS tag can be used to enable conditional
+-# documentation sections, marked by \if sectionname ... \endif.
++# The ENABLED_SECTIONS tag can be used to enable conditional documentation
++# sections, marked by \if <section_label> ... \endif and \cond <section_label>
++# ... \endcond blocks.
+ 
+ ENABLED_SECTIONS       =
+ 
+-# The MAX_INITIALIZER_LINES tag determines the maximum number of lines
+-# the initial value of a variable or macro consists of for it to appear in
+-# the documentation. If the initializer consists of more lines than specified
+-# here it will be hidden. Use a value of 0 to hide initializers completely.
+-# The appearance of the initializer of individual variables and macros in the
+-# documentation can be controlled using \showinitializer or \hideinitializer
+-# command in the documentation regardless of this setting.
++# The MAX_INITIALIZER_LINES tag determines the maximum number of lines that the
++# initial value of a variable or macro / define can have for it to appear in the
++# documentation. If the initializer consists of more lines than specified here
++# it will be hidden. Use a value of 0 to hide initializers completely. The
++# appearance of the value of individual variables and macros / defines can be
++# controlled using \showinitializer or \hideinitializer command in the
++# documentation regardless of this setting.
++# Minimum value: 0, maximum value: 10000, default value: 30.
+ 
+ MAX_INITIALIZER_LINES  = 30
+ 
+-# Set the SHOW_USED_FILES tag to NO to disable the list of files generated
+-# at the bottom of the documentation of classes and structs. If set to YES the
+-# list will mention the files that were used to generate the documentation.
++# Set the SHOW_USED_FILES tag to NO to disable the list of files generated at
++# the bottom of the documentation of classes and structs. If set to YES the list
++# will mention the files that were used to generate the documentation.
++# The default value is: YES.
+ 
+ SHOW_USED_FILES        = YES
+ 
+-# If the sources in your project are distributed over multiple directories
+-# then setting the SHOW_DIRECTORIES tag to YES will show the directory hierarchy
+-# in the documentation. The default is NO.
+-
+-SHOW_DIRECTORIES       = NO
+-
+-# Set the SHOW_FILES tag to NO to disable the generation of the Files page.
+-# This will remove the Files entry from the Quick Index and from the
+-# Folder Tree View (if specified). The default is YES.
++# Set the SHOW_FILES tag to NO to disable the generation of the Files page. This
++# will remove the Files entry from the Quick Index and from the Folder Tree View
++# (if specified).
++# The default value is: YES.
+ 
+ SHOW_FILES             = YES
+ 
+-# Set the SHOW_NAMESPACES tag to NO to disable the generation of the
+-# Namespaces page.
+-# This will remove the Namespaces entry from the Quick Index
+-# and from the Folder Tree View (if specified). The default is YES.
++# Set the SHOW_NAMESPACES tag to NO to disable the generation of the Namespaces
++# page. This will remove the Namespaces entry from the Quick Index and from the
++# Folder Tree View (if specified).
++# The default value is: YES.
+ 
+ SHOW_NAMESPACES        = YES
+ 
+ # The FILE_VERSION_FILTER tag can be used to specify a program or script that
+ # doxygen should invoke to get the current version for each file (typically from
+ # the version control system). Doxygen will invoke the program by executing (via
+-# popen()) the command <command> <input-file>, where <command> is the value of
+-# the FILE_VERSION_FILTER tag, and <input-file> is the name of an input file
+-# provided by doxygen. Whatever the program writes to standard output
+-# is used as the file version. See the manual for examples.
++# popen()) the command command input-file, where command is the value of the
++# FILE_VERSION_FILTER tag, and input-file is the name of an input file provided
++# by doxygen. Whatever the program writes to standard output is used as the file
++# version. For an example see the documentation.
+ 
+ FILE_VERSION_FILTER    =
+ 
+ # The LAYOUT_FILE tag can be used to specify a layout file which will be parsed
+ # by doxygen. The layout file controls the global structure of the generated
+-# output files in an output format independent way. The create the layout file
+-# that represents doxygen's defaults, run doxygen with the -l option.
+-# You can optionally specify a file name after the option, if omitted
+-# DoxygenLayout.xml will be used as the name of the layout file.
++# output files in an output format independent way. To create the layout file
++# that represents doxygen's defaults, run doxygen with the -l option. You can
++# optionally specify a file name after the option, if omitted DoxygenLayout.xml
++# will be used as the name of the layout file.
++#
++# Note that if you run doxygen from a directory containing a file called
++# DoxygenLayout.xml, doxygen will parse it automatically even if the LAYOUT_FILE
++# tag is left empty.
+ 
+ LAYOUT_FILE            =
+ 
+-# The CITE_BIB_FILES tag can be used to specify one or more bib files
+-# containing the references data. This must be a list of .bib files. The
+-# .bib extension is automatically appended if omitted. Using this command
+-# requires the bibtex tool to be installed. See also
+-# http://en.wikipedia.org/wiki/BibTeX for more info. For LaTeX the style
+-# of the bibliography can be controlled using LATEX_BIB_STYLE.
++# The CITE_BIB_FILES tag can be used to specify one or more bib files containing
++# the reference definitions. This must be a list of .bib files. The .bib
++# extension is automatically appended if omitted. This requires the bibtex tool
++# to be installed. See also http://en.wikipedia.org/wiki/BibTeX for more info.
++# For LaTeX the style of the bibliography can be controlled using
++# LATEX_BIB_STYLE. To use this feature you need bibtex and perl available in the
++# search path. Do not use file names with spaces, bibtex cannot handle them. See
++# also \cite for info how to create references.
+ 
+ CITE_BIB_FILES         =
+ 
+ #---------------------------------------------------------------------------
+-# configuration options related to warning and progress messages
++# Configuration options related to warning and progress messages
+ #---------------------------------------------------------------------------
+ 
+-# The QUIET tag can be used to turn on/off the messages that are generated
+-# by doxygen. Possible values are YES and NO. If left blank NO is used.
++# The QUIET tag can be used to turn on/off the messages that are generated to
++# standard output by doxygen. If QUIET is set to YES this implies that the
++# messages are off.
++# The default value is: NO.
+ 
+ QUIET                  = NO
+ 
+ # The WARNINGS tag can be used to turn on/off the warning messages that are
+-# generated by doxygen. Possible values are YES and NO. If left blank
+-# NO is used.
++# generated to standard error ( stderr) by doxygen. If WARNINGS is set to YES
++# this implies that the warnings are on.
++#
++# Tip: Turn warnings on while writing the documentation.
++# The default value is: YES.
+ 
+ WARNINGS               = YES
+ 
+-# If WARN_IF_UNDOCUMENTED is set to YES, then doxygen will generate warnings
+-# for undocumented members. If EXTRACT_ALL is set to YES then this flag will
+-# automatically be disabled.
++# If the WARN_IF_UNDOCUMENTED tag is set to YES, then doxygen will generate
++# warnings for undocumented members. If EXTRACT_ALL is set to YES then this flag
++# will automatically be disabled.
++# The default value is: YES.
+ 
+ WARN_IF_UNDOCUMENTED   = YES
+ 
+-# If WARN_IF_DOC_ERROR is set to YES, doxygen will generate warnings for
+-# potential errors in the documentation, such as not documenting some
+-# parameters in a documented function, or documenting parameters that
+-# don't exist or using markup commands wrongly.
++# If the WARN_IF_DOC_ERROR tag is set to YES, doxygen will generate warnings for
++# potential errors in the documentation, such as not documenting some parameters
++# in a documented function, or documenting parameters that don't exist or using
++# markup commands wrongly.
++# The default value is: YES.
+ 
+ WARN_IF_DOC_ERROR      = YES
+ 
+-# The WARN_NO_PARAMDOC option can be enabled to get warnings for
+-# functions that are documented, but have no documentation for their parameters
+-# or return value. If set to NO (the default) doxygen will only warn about
+-# wrong or incomplete parameter documentation, but not about the absence of
+-# documentation.
++# This WARN_NO_PARAMDOC option can be enabled to get warnings for functions that
++# are documented, but have no documentation for their parameters or return
++# value. If set to NO doxygen will only warn about wrong or incomplete parameter
++# documentation, but not about the absence of documentation.
++# The default value is: NO.
+ 
+ WARN_NO_PARAMDOC       = NO
+ 
+-# The WARN_FORMAT tag determines the format of the warning messages that
+-# doxygen can produce. The string should contain the $file, $line, and $text
+-# tags, which will be replaced by the file and line number from which the
+-# warning originated and the warning text. Optionally the format may contain
+-# $version, which will be replaced by the version of the file (if it could
+-# be obtained via FILE_VERSION_FILTER)
++# The WARN_FORMAT tag determines the format of the warning messages that doxygen
++# can produce. The string should contain the $file, $line, and $text tags, which
++# will be replaced by the file and line number from which the warning originated
++# and the warning text. Optionally the format may contain $version, which will
++# be replaced by the version of the file (if it could be obtained via
++# FILE_VERSION_FILTER)
++# The default value is: $file:$line: $text.
+ 
+ WARN_FORMAT            = "$file:$line: $text"
+ 
+-# The WARN_LOGFILE tag can be used to specify a file to which warning
+-# and error messages should be written. If left blank the output is written
+-# to stderr.
++# The WARN_LOGFILE tag can be used to specify a file to which warning and error
++# messages should be written. If left blank the output is written to standard
++# error (stderr).
+ 
+ WARN_LOGFILE           =
+ 
+ #---------------------------------------------------------------------------
+-# configuration options related to the input files
++# Configuration options related to the input files
+ #---------------------------------------------------------------------------
+ 
+-# The INPUT tag can be used to specify the files and/or directories that contain
+-# documented source files. You may enter file names like "myfile.cpp" or
+-# directories like "/usr/src/myproject". Separate the files or directories
+-# with spaces.
++# The INPUT tag is used to specify the files and/or directories that contain
++# documented source files. You may enter file names like myfile.cpp or
++# directories like /usr/src/myproject. Separate the files or directories with
++# spaces.
++# Note: If this tag is empty the current directory is searched.
+ 
+ INPUT                  = libhmsbeagle
+ 
+ # This tag can be used to specify the character encoding of the source files
+-# that doxygen parses. Internally doxygen uses the UTF-8 encoding, which is
+-# also the default input encoding. Doxygen uses libiconv (or the iconv built
+-# into libc) for the transcoding. See http://www.gnu.org/software/libiconv for
+-# the list of possible encodings.
++# that doxygen parses. Internally doxygen uses the UTF-8 encoding. Doxygen uses
++# libiconv (or the iconv built into libc) for the transcoding. See the libiconv
++# documentation (see: http://www.gnu.org/software/libiconv) for the list of
++# possible encodings.
++# The default value is: UTF-8.
+ 
+ INPUT_ENCODING         = UTF-8
+ 
+ # If the value of the INPUT tag contains directories, you can use the
+-# FILE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
+-# and *.h) to filter out the source-files in the directories. If left
+-# blank the following patterns are tested:
+-# *.c *.cc *.cxx *.cpp *.c++ *.d *.java *.ii *.ixx *.ipp *.i++ *.inl *.h *.hh
+-# *.hxx *.hpp *.h++ *.idl *.odl *.cs *.php *.php3 *.inc *.m *.mm *.dox *.py
+-# *.f90 *.f *.for *.vhd *.vhdl
++# FILE_PATTERNS tag to specify one or more wildcard patterns (like *.cpp and
++# *.h) to filter out the source-files in the directories. If left blank the
++# following patterns are tested:*.c, *.cc, *.cxx, *.cpp, *.c++, *.java, *.ii,
++# *.ixx, *.ipp, *.i++, *.inl, *.idl, *.ddl, *.odl, *.h, *.hh, *.hxx, *.hpp,
++# *.h++, *.cs, *.d, *.php, *.php4, *.php5, *.phtml, *.inc, *.m, *.markdown,
++# *.md, *.mm, *.dox, *.py, *.f90, *.f, *.for, *.tcl, *.vhd, *.vhdl, *.ucf,
++# *.qsf, *.as and *.js.
+ 
+ FILE_PATTERNS          = beagle.h
+ 
+-# The RECURSIVE tag can be used to turn specify whether or not subdirectories
+-# should be searched for input files as well. Possible values are YES and NO.
+-# If left blank NO is used.
++# The RECURSIVE tag can be used to specify whether or not subdirectories should
++# be searched for input files as well.
++# The default value is: NO.
+ 
+ RECURSIVE              = NO
+ 
+-# The EXCLUDE tag can be used to specify files and/or directories that should
++# The EXCLUDE tag can be used to specify files and/or directories that should be
+ # excluded from the INPUT source files. This way you can easily exclude a
+ # subdirectory from a directory tree whose root is specified with the INPUT tag.
+-# Note that relative paths are relative to directory from which doxygen is run.
++#
++# Note that relative paths are relative to the directory from which doxygen is
++# run.
+ 
+ EXCLUDE                =
+ 
+-# The EXCLUDE_SYMLINKS tag can be used select whether or not files or
++# The EXCLUDE_SYMLINKS tag can be used to select whether or not files or
+ # directories that are symbolic links (a Unix file system feature) are excluded
+ # from the input.
++# The default value is: NO.
+ 
+ EXCLUDE_SYMLINKS       = NO
+ 
+ # If the value of the INPUT tag contains directories, you can use the
+ # EXCLUDE_PATTERNS tag to specify one or more wildcard patterns to exclude
+-# certain files from those directories. Note that the wildcards are matched
+-# against the file with absolute path, so to exclude all test directories
+-# for example use the pattern */test/*
++# certain files from those directories.
++#
++# Note that the wildcards are matched against the file with absolute path, so to
++# exclude all test directories for example use the pattern */test/*
+ 
+ EXCLUDE_PATTERNS       =
+ 
+@@ -681,752 +791,1080 @@
+ # output. The symbol name can be a fully qualified name, a word, or if the
+ # wildcard * is used, a substring. Examples: ANamespace, AClass,
+ # AClass::ANamespace, ANamespace::*Test
++#
++# Note that the wildcards are matched against the file with absolute path, so to
++# exclude all test directories use the pattern */test/*
+ 
+ EXCLUDE_SYMBOLS        =
+ 
+-# The EXAMPLE_PATH tag can be used to specify one or more files or
+-# directories that contain example code fragments that are included (see
+-# the \include command).
++# The EXAMPLE_PATH tag can be used to specify one or more files or directories
++# that contain example code fragments that are included (see the \include
++# command).
+ 
+ EXAMPLE_PATH           =
+ 
+ # If the value of the EXAMPLE_PATH tag contains directories, you can use the
+-# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
+-# and *.h) to filter out the source-files in the directories. If left
+-# blank all files are included.
++# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp and
++# *.h) to filter out the source-files in the directories. If left blank all
++# files are included.
+ 
+ EXAMPLE_PATTERNS       =
+ 
+ # If the EXAMPLE_RECURSIVE tag is set to YES then subdirectories will be
+-# searched for input files to be used with the \include or \dontinclude
+-# commands irrespective of the value of the RECURSIVE tag.
+-# Possible values are YES and NO. If left blank NO is used.
++# searched for input files to be used with the \include or \dontinclude commands
++# irrespective of the value of the RECURSIVE tag.
++# The default value is: NO.
+ 
+ EXAMPLE_RECURSIVE      = NO
+ 
+-# The IMAGE_PATH tag can be used to specify one or more files or
+-# directories that contain image that are included in the documentation (see
+-# the \image command).
++# The IMAGE_PATH tag can be used to specify one or more files or directories
++# that contain images that are to be included in the documentation (see the
++# \image command).
+ 
+ IMAGE_PATH             =
+ 
+ # The INPUT_FILTER tag can be used to specify a program that doxygen should
+ # invoke to filter for each input file. Doxygen will invoke the filter program
+-# by executing (via popen()) the command <filter> <input-file>, where <filter>
+-# is the value of the INPUT_FILTER tag, and <input-file> is the name of an
+-# input file. Doxygen will then use the output that the filter program writes
+-# to standard output.
+-# If FILTER_PATTERNS is specified, this tag will be
+-# ignored.
++# by executing (via popen()) the command:
++#
++# <filter> <input-file>
++#
++# where <filter> is the value of the INPUT_FILTER tag, and <input-file> is the
++# name of an input file. Doxygen will then use the output that the filter
++# program writes to standard output. If FILTER_PATTERNS is specified, this tag
++# will be ignored.
++#
++# Note that the filter must not add or remove lines; it is applied before the
++# code is scanned, but not when the output code is generated. If lines are added
++# or removed, the anchors will not be placed correctly.
+ 
+ INPUT_FILTER           =
+ 
+ # The FILTER_PATTERNS tag can be used to specify filters on a per file pattern
+-# basis.
+-# Doxygen will compare the file name with each pattern and apply the
+-# filter if there is a match.
+-# The filters are a list of the form:
+-# pattern=filter (like *.cpp=my_cpp_filter). See INPUT_FILTER for further
+-# info on how filters are used. If FILTER_PATTERNS is empty or if
+-# non of the patterns match the file name, INPUT_FILTER is applied.
++# basis. Doxygen will compare the file name with each pattern and apply the
++# filter if there is a match. The filters are a list of the form: pattern=filter
++# (like *.cpp=my_cpp_filter). See INPUT_FILTER for further information on how
++# filters are used. If the FILTER_PATTERNS tag is empty or if none of the
++# patterns match the file name, INPUT_FILTER is applied.
+ 
+ FILTER_PATTERNS        =
+ 
+ # If the FILTER_SOURCE_FILES tag is set to YES, the input filter (if set using
+-# INPUT_FILTER) will be used to filter the input files when producing source
+-# files to browse (i.e. when SOURCE_BROWSER is set to YES).
++# INPUT_FILTER ) will also be used to filter the input files that are used for
++# producing the source files to browse (i.e. when SOURCE_BROWSER is set to YES).
++# The default value is: NO.
+ 
+ FILTER_SOURCE_FILES    = NO
+ 
+ # The FILTER_SOURCE_PATTERNS tag can be used to specify source filters per file
+-# pattern. A pattern will override the setting for FILTER_PATTERN (if any)
+-# and it is also possible to disable source filtering for a specific pattern
+-# using *.ext= (so without naming a filter). This option only has effect when
+-# FILTER_SOURCE_FILES is enabled.
++# pattern. A pattern will override the setting for FILTER_PATTERN (if any) and
++# it is also possible to disable source filtering for a specific pattern using
++# *.ext= (so without naming a filter).
++# This tag requires that the tag FILTER_SOURCE_FILES is set to YES.
+ 
+ FILTER_SOURCE_PATTERNS =
+ 
++# If the USE_MDFILE_AS_MAINPAGE tag refers to the name of a markdown file that
++# is part of the input, its contents will be placed on the main page
++# (index.html). This can be useful if you have a project on for instance GitHub
++# and want to reuse the introduction page also for the doxygen output.
++
++USE_MDFILE_AS_MAINPAGE =
++
+ #---------------------------------------------------------------------------
+-# configuration options related to source browsing
++# Configuration options related to source browsing
+ #---------------------------------------------------------------------------
+ 
+-# If the SOURCE_BROWSER tag is set to YES then a list of source files will
+-# be generated. Documented entities will be cross-referenced with these sources.
+-# Note: To get rid of all source code in the generated output, make sure also
+-# VERBATIM_HEADERS is set to NO.
++# If the SOURCE_BROWSER tag is set to YES then a list of source files will be
++# generated. Documented entities will be cross-referenced with these sources.
++#
++# Note: To get rid of all source code in the generated output, make sure that
++# also VERBATIM_HEADERS is set to NO.
++# The default value is: NO.
+ 
+ SOURCE_BROWSER         = NO
+ 
+-# Setting the INLINE_SOURCES tag to YES will include the body
+-# of functions and classes directly in the documentation.
++# Setting the INLINE_SOURCES tag to YES will include the body of functions,
++# classes and enums directly into the documentation.
++# The default value is: NO.
+ 
+ INLINE_SOURCES         = NO
+ 
+-# Setting the STRIP_CODE_COMMENTS tag to YES (the default) will instruct
+-# doxygen to hide any special comment blocks from generated source code
+-# fragments. Normal C and C++ comments will always remain visible.
++# Setting the STRIP_CODE_COMMENTS tag to YES will instruct doxygen to hide any
++# special comment blocks from generated source code fragments. Normal C, C++ and
++# Fortran comments will always remain visible.
++# The default value is: YES.
+ 
+ STRIP_CODE_COMMENTS    = YES
+ 
+-# If the REFERENCED_BY_RELATION tag is set to YES
+-# then for each documented function all documented
+-# functions referencing it will be listed.
++# If the REFERENCED_BY_RELATION tag is set to YES then for each documented
++# function all documented functions referencing it will be listed.
++# The default value is: NO.
+ 
+ REFERENCED_BY_RELATION = NO
+ 
+-# If the REFERENCES_RELATION tag is set to YES
+-# then for each documented function all documented entities
+-# called/used by that function will be listed.
++# If the REFERENCES_RELATION tag is set to YES then for each documented function
++# all documented entities called/used by that function will be listed.
++# The default value is: NO.
+ 
+ REFERENCES_RELATION    = NO
+ 
+-# If the REFERENCES_LINK_SOURCE tag is set to YES (the default)
+-# and SOURCE_BROWSER tag is set to YES, then the hyperlinks from
+-# functions in REFERENCES_RELATION and REFERENCED_BY_RELATION lists will
+-# link to the source code.
+-# Otherwise they will link to the documentation.
++# If the REFERENCES_LINK_SOURCE tag is set to YES and SOURCE_BROWSER tag is set
++# to YES, then the hyperlinks from functions in REFERENCES_RELATION and
++# REFERENCED_BY_RELATION lists will link to the source code. Otherwise they will
++# link to the documentation.
++# The default value is: YES.
+ 
+ REFERENCES_LINK_SOURCE = YES
+ 
+-# If the USE_HTAGS tag is set to YES then the references to source code
+-# will point to the HTML generated by the htags(1) tool instead of doxygen
+-# built-in source browser. The htags tool is part of GNU's global source
+-# tagging system (see http://www.gnu.org/software/global/global.html). You
+-# will need version 4.8.6 or higher.
++# If SOURCE_TOOLTIPS is enabled (the default) then hovering a hyperlink in the
++# source code will show a tooltip with additional information such as prototype,
++# brief description and links to the definition and documentation. Since this
++# will make the HTML file larger and loading of large files a bit slower, you
++# can opt to disable this feature.
++# The default value is: YES.
++# This tag requires that the tag SOURCE_BROWSER is set to YES.
++
++SOURCE_TOOLTIPS        = YES
++
++# If the USE_HTAGS tag is set to YES then the references to source code will
++# point to the HTML generated by the htags(1) tool instead of doxygen built-in
++# source browser. The htags tool is part of GNU's global source tagging system
++# (see http://www.gnu.org/software/global/global.html). You will need version
++# 4.8.6 or higher.
++#
++# To use it do the following:
++# - Install the latest version of global
++# - Enable SOURCE_BROWSER and USE_HTAGS in the config file
++# - Make sure the INPUT points to the root of the source tree
++# - Run doxygen as normal
++#
++# Doxygen will invoke htags (and that will in turn invoke gtags), so these
++# tools must be available from the command line (i.e. in the search path).
++#
++# The result: instead of the source browser generated by doxygen, the links to
++# source code will now point to the output of htags.
++# The default value is: NO.
++# This tag requires that the tag SOURCE_BROWSER is set to YES.
+ 
+ USE_HTAGS              = NO
+ 
+-# If the VERBATIM_HEADERS tag is set to YES (the default) then Doxygen
+-# will generate a verbatim copy of the header file for each class for
+-# which an include is specified. Set to NO to disable this.
++# If the VERBATIM_HEADERS tag is set the YES then doxygen will generate a
++# verbatim copy of the header file for each class for which an include is
++# specified. Set to NO to disable this.
++# See also: Section \class.
++# The default value is: YES.
+ 
+ VERBATIM_HEADERS       = YES
+ 
+ #---------------------------------------------------------------------------
+-# configuration options related to the alphabetical class index
++# Configuration options related to the alphabetical class index
+ #---------------------------------------------------------------------------
+ 
+-# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index
+-# of all compounds will be generated. Enable this if the project
+-# contains a lot of classes, structs, unions or interfaces.
++# If the ALPHABETICAL_INDEX tag is set to YES, an alphabetical index of all
++# compounds will be generated. Enable this if the project contains a lot of
++# classes, structs, unions or interfaces.
++# The default value is: YES.
+ 
+ ALPHABETICAL_INDEX     = YES
+ 
+-# If the alphabetical index is enabled (see ALPHABETICAL_INDEX) then
+-# the COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns
+-# in which this list will be split (can be a number in the range [1..20])
++# The COLS_IN_ALPHA_INDEX tag can be used to specify the number of columns in
++# which the alphabetical index list will be split.
++# Minimum value: 1, maximum value: 20, default value: 5.
++# This tag requires that the tag ALPHABETICAL_INDEX is set to YES.
+ 
+ COLS_IN_ALPHA_INDEX    = 5
+ 
+-# In case all classes in a project start with a common prefix, all
+-# classes will be put under the same header in the alphabetical index.
+-# The IGNORE_PREFIX tag can be used to specify one or more prefixes that
+-# should be ignored while generating the index headers.
++# In case all classes in a project start with a common prefix, all classes will
++# be put under the same header in the alphabetical index. The IGNORE_PREFIX tag
++# can be used to specify a prefix (or a list of prefixes) that should be ignored
++# while generating the index headers.
++# This tag requires that the tag ALPHABETICAL_INDEX is set to YES.
+ 
+ IGNORE_PREFIX          =
+ 
+ #---------------------------------------------------------------------------
+-# configuration options related to the HTML output
++# Configuration options related to the HTML output
+ #---------------------------------------------------------------------------
+ 
+-# If the GENERATE_HTML tag is set to YES (the default) Doxygen will
+-# generate HTML output.
++# If the GENERATE_HTML tag is set to YES doxygen will generate HTML output
++# The default value is: YES.
+ 
+ GENERATE_HTML          = $(GENERATE_HTML)
+ 
+-# The HTML_OUTPUT tag is used to specify where the HTML docs will be put.
+-# If a relative path is entered the value of OUTPUT_DIRECTORY will be
+-# put in front of it. If left blank `html' will be used as the default path.
++# The HTML_OUTPUT tag is used to specify where the HTML docs will be put. If a
++# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
++# it.
++# The default directory is: html.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_OUTPUT            = html
+ 
+-# The HTML_FILE_EXTENSION tag can be used to specify the file extension for
+-# each generated HTML page (for example: .htm,.php,.asp). If it is left blank
+-# doxygen will generate files with .html extension.
++# The HTML_FILE_EXTENSION tag can be used to specify the file extension for each
++# generated HTML page (for example: .htm, .php, .asp).
++# The default value is: .html.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_FILE_EXTENSION    = .html
+ 
+-# The HTML_HEADER tag can be used to specify a personal HTML header for
+-# each generated HTML page. If it is left blank doxygen will generate a
+-# standard header. Note that when using a custom header you are responsible
+-#  for the proper inclusion of any scripts and style sheets that doxygen
+-# needs, which is dependent on the configuration options used.
+-# It is adviced to generate a default header using "doxygen -w html
+-# header.html footer.html stylesheet.css YourConfigFile" and then modify
+-# that header. Note that the header is subject to change so you typically
+-# have to redo this when upgrading to a newer version of doxygen or when
+-# changing the value of configuration settings such as GENERATE_TREEVIEW!
++# The HTML_HEADER tag can be used to specify a user-defined HTML header file for
++# each generated HTML page. If the tag is left blank doxygen will generate a
++# standard header.
++#
++# To get valid HTML the header file that includes any scripts and style sheets
++# that doxygen needs, which is dependent on the configuration options used (e.g.
++# the setting GENERATE_TREEVIEW). It is highly recommended to start with a
++# default header using
++# doxygen -w html new_header.html new_footer.html new_stylesheet.css
++# YourConfigFile
++# and then modify the file new_header.html. See also section "Doxygen usage"
++# for information on how to generate the default header that doxygen normally
++# uses.
++# Note: The header is subject to change so you typically have to regenerate the
++# default header when upgrading to a newer version of doxygen. For a description
++# of the possible markers and block names see the documentation.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_HEADER            =
+ 
+-# The HTML_FOOTER tag can be used to specify a personal HTML footer for
+-# each generated HTML page. If it is left blank doxygen will generate a
+-# standard footer.
++# The HTML_FOOTER tag can be used to specify a user-defined HTML footer for each
++# generated HTML page. If the tag is left blank doxygen will generate a standard
++# footer. See HTML_HEADER for more information on how to generate a default
++# footer and what special commands can be used inside the footer. See also
++# section "Doxygen usage" for information on how to generate the default footer
++# that doxygen normally uses.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_FOOTER            =
+ 
+-# The HTML_STYLESHEET tag can be used to specify a user-defined cascading
+-# style sheet that is used by each HTML page. It can be used to
+-# fine-tune the look of the HTML output. If the tag is left blank doxygen
+-# will generate a default style sheet. Note that doxygen will try to copy
+-# the style sheet file to the HTML output directory, so don't put your own
+-# stylesheet in the HTML output directory as well, or it will be erased!
++# The HTML_STYLESHEET tag can be used to specify a user-defined cascading style
++# sheet that is used by each HTML page. It can be used to fine-tune the look of
++# the HTML output. If left blank doxygen will generate a default style sheet.
++# See also section "Doxygen usage" for information on how to generate the style
++# sheet that doxygen normally uses.
++# Note: It is recommended to use HTML_EXTRA_STYLESHEET instead of this tag, as
++# it is more robust and this tag (HTML_STYLESHEET) will in the future become
++# obsolete.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_STYLESHEET        =
+ 
++# The HTML_EXTRA_STYLESHEET tag can be used to specify an additional user-
++# defined cascading style sheet that is included after the standard style sheets
++# created by doxygen. Using this option one can overrule certain style aspects.
++# This is preferred over using HTML_STYLESHEET since it does not replace the
++# standard style sheet and is therefor more robust against future updates.
++# Doxygen will copy the style sheet file to the output directory. For an example
++# see the documentation.
++# This tag requires that the tag GENERATE_HTML is set to YES.
++
++HTML_EXTRA_STYLESHEET  =
++
+ # The HTML_EXTRA_FILES tag can be used to specify one or more extra images or
+ # other source files which should be copied to the HTML output directory. Note
+ # that these files will be copied to the base HTML output directory. Use the
+-# $relpath$ marker in the HTML_HEADER and/or HTML_FOOTER files to load these
+-# files. In the HTML_STYLESHEET file, use the file name only. Also note that
+-# the files will be copied as-is; there are no commands or markers available.
++# $relpath^ marker in the HTML_HEADER and/or HTML_FOOTER files to load these
++# files. In the HTML_STYLESHEET file, use the file name only. Also note that the
++# files will be copied as-is; there are no commands or markers available.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_EXTRA_FILES       =
+ 
+-# The HTML_COLORSTYLE_HUE tag controls the color of the HTML output.
+-# Doxygen will adjust the colors in the stylesheet and background images
+-# according to this color. Hue is specified as an angle on a colorwheel,
+-# see http://en.wikipedia.org/wiki/Hue for more information.
+-# For instance the value 0 represents red, 60 is yellow, 120 is green,
+-# 180 is cyan, 240 is blue, 300 purple, and 360 is red again.
+-# The allowed range is 0 to 359.
++# The HTML_COLORSTYLE_HUE tag controls the color of the HTML output. Doxygen
++# will adjust the colors in the stylesheet and background images according to
++# this color. Hue is specified as an angle on a colorwheel, see
++# http://en.wikipedia.org/wiki/Hue for more information. For instance the value
++# 0 represents red, 60 is yellow, 120 is green, 180 is cyan, 240 is blue, 300
++# purple, and 360 is red again.
++# Minimum value: 0, maximum value: 359, default value: 220.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_COLORSTYLE_HUE    = 220
+ 
+-# The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of
+-# the colors in the HTML output. For a value of 0 the output will use
+-# grayscales only. A value of 255 will produce the most vivid colors.
++# The HTML_COLORSTYLE_SAT tag controls the purity (or saturation) of the colors
++# in the HTML output. For a value of 0 the output will use grayscales only. A
++# value of 255 will produce the most vivid colors.
++# Minimum value: 0, maximum value: 255, default value: 100.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_COLORSTYLE_SAT    = 100
+ 
+-# The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to
+-# the luminance component of the colors in the HTML output. Values below
+-# 100 gradually make the output lighter, whereas values above 100 make
+-# the output darker. The value divided by 100 is the actual gamma applied,
+-# so 80 represents a gamma of 0.8, The value 220 represents a gamma of 2.2,
+-# and 100 does not change the gamma.
++# The HTML_COLORSTYLE_GAMMA tag controls the gamma correction applied to the
++# luminance component of the colors in the HTML output. Values below 100
++# gradually make the output lighter, whereas values above 100 make the output
++# darker. The value divided by 100 is the actual gamma applied, so 80 represents
++# a gamma of 0.8, The value 220 represents a gamma of 2.2, and 100 does not
++# change the gamma.
++# Minimum value: 40, maximum value: 240, default value: 80.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_COLORSTYLE_GAMMA  = 80
+ 
+ # If the HTML_TIMESTAMP tag is set to YES then the footer of each generated HTML
+-# page will contain the date and time when the page was generated. Setting
+-# this to NO can help when comparing the output of multiple runs.
++# page will contain the date and time when the page was generated. Setting this
++# to NO can help when comparing the output of multiple runs.
++# The default value is: YES.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_TIMESTAMP         = YES
+ 
+-# If the HTML_ALIGN_MEMBERS tag is set to YES, the members of classes,
+-# files or namespaces will be aligned in HTML using tables. If set to
+-# NO a bullet list will be used.
+-
+-HTML_ALIGN_MEMBERS     = YES
+-
+ # If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML
+ # documentation will contain sections that can be hidden and shown after the
+-# page has loaded. For this to work a browser that supports
+-# JavaScript and DHTML is required (for instance Mozilla 1.0+, Firefox
+-# Netscape 6.0+, Internet explorer 5.0+, Konqueror, or Safari).
++# page has loaded.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ HTML_DYNAMIC_SECTIONS  = NO
+ 
+-# If the GENERATE_DOCSET tag is set to YES, additional index files
+-# will be generated that can be used as input for Apple's Xcode 3
+-# integrated development environment, introduced with OSX 10.5 (Leopard).
+-# To create a documentation set, doxygen will generate a Makefile in the
+-# HTML output directory. Running make will produce the docset in that
+-# directory and running "make install" will install the docset in
+-# ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find
+-# it at startup.
+-# See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html
++# With HTML_INDEX_NUM_ENTRIES one can control the preferred number of entries
++# shown in the various tree structured indices initially; the user can expand
++# and collapse entries dynamically later on. Doxygen will expand the tree to
++# such a level that at most the specified number of entries are visible (unless
++# a fully collapsed tree already exceeds this amount). So setting the number of
++# entries 1 will produce a full collapsed tree by default. 0 is a special value
++# representing an infinite number of entries and will result in a full expanded
++# tree by default.
++# Minimum value: 0, maximum value: 9999, default value: 100.
++# This tag requires that the tag GENERATE_HTML is set to YES.
++
++HTML_INDEX_NUM_ENTRIES = 100
++
++# If the GENERATE_DOCSET tag is set to YES, additional index files will be
++# generated that can be used as input for Apple's Xcode 3 integrated development
++# environment (see: http://developer.apple.com/tools/xcode/), introduced with
++# OSX 10.5 (Leopard). To create a documentation set, doxygen will generate a
++# Makefile in the HTML output directory. Running make will produce the docset in
++# that directory and running make install will install the docset in
++# ~/Library/Developer/Shared/Documentation/DocSets so that Xcode will find it at
++# startup. See http://developer.apple.com/tools/creatingdocsetswithdoxygen.html
+ # for more information.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ GENERATE_DOCSET        = NO
+ 
+-# When GENERATE_DOCSET tag is set to YES, this tag determines the name of the
+-# feed. A documentation feed provides an umbrella under which multiple
+-# documentation sets from a single provider (such as a company or product suite)
+-# can be grouped.
++# This tag determines the name of the docset feed. A documentation feed provides
++# an umbrella under which multiple documentation sets from a single provider
++# (such as a company or product suite) can be grouped.
++# The default value is: Doxygen generated docs.
++# This tag requires that the tag GENERATE_DOCSET is set to YES.
+ 
+ DOCSET_FEEDNAME        = "Doxygen generated docs"
+ 
+-# When GENERATE_DOCSET tag is set to YES, this tag specifies a string that
+-# should uniquely identify the documentation set bundle. This should be a
+-# reverse domain-name style string, e.g. com.mycompany.MyDocSet. Doxygen
+-# will append .docset to the name.
++# This tag specifies a string that should uniquely identify the documentation
++# set bundle. This should be a reverse domain-name style string, e.g.
++# com.mycompany.MyDocSet. Doxygen will append .docset to the name.
++# The default value is: org.doxygen.Project.
++# This tag requires that the tag GENERATE_DOCSET is set to YES.
+ 
+ DOCSET_BUNDLE_ID       = org.doxygen.Project
+ 
+-# When GENERATE_PUBLISHER_ID tag specifies a string that should uniquely identify
++# The DOCSET_PUBLISHER_ID tag specifies a string that should uniquely identify
+ # the documentation publisher. This should be a reverse domain-name style
+ # string, e.g. com.mycompany.MyDocSet.documentation.
++# The default value is: org.doxygen.Publisher.
++# This tag requires that the tag GENERATE_DOCSET is set to YES.
+ 
+ DOCSET_PUBLISHER_ID    = org.doxygen.Publisher
+ 
+-# The GENERATE_PUBLISHER_NAME tag identifies the documentation publisher.
++# The DOCSET_PUBLISHER_NAME tag identifies the documentation publisher.
++# The default value is: Publisher.
++# This tag requires that the tag GENERATE_DOCSET is set to YES.
+ 
+ DOCSET_PUBLISHER_NAME  = Publisher
+ 
+-# If the GENERATE_HTMLHELP tag is set to YES, additional index files
+-# will be generated that can be used as input for tools like the
+-# Microsoft HTML help workshop to generate a compiled HTML help file (.chm)
+-# of the generated HTML documentation.
++# If the GENERATE_HTMLHELP tag is set to YES then doxygen generates three
++# additional HTML index files: index.hhp, index.hhc, and index.hhk. The
++# index.hhp is a project file that can be read by Microsoft's HTML Help Workshop
++# (see: http://www.microsoft.com/en-us/download/details.aspx?id=21138) on
++# Windows.
++#
++# The HTML Help Workshop contains a compiler that can convert all HTML output
++# generated by doxygen into a single compiled HTML file (.chm). Compiled HTML
++# files are now used as the Windows 98 help format, and will replace the old
++# Windows help format (.hlp) on all Windows platforms in the future. Compressed
++# HTML files also contain an index, a table of contents, and you can search for
++# words in the documentation. The HTML workshop also contains a viewer for
++# compressed HTML files.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ GENERATE_HTMLHELP      = NO
+ 
+-# If the GENERATE_HTMLHELP tag is set to YES, the CHM_FILE tag can
+-# be used to specify the file name of the resulting .chm file. You
+-# can add a path in front of the file if the result should not be
++# The CHM_FILE tag can be used to specify the file name of the resulting .chm
++# file. You can add a path in front of the file if the result should not be
+ # written to the html output directory.
++# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
+ 
+ CHM_FILE               =
+ 
+-# If the GENERATE_HTMLHELP tag is set to YES, the HHC_LOCATION tag can
+-# be used to specify the location (absolute path including file name) of
+-# the HTML help compiler (hhc.exe). If non-empty doxygen will try to run
+-# the HTML help compiler on the generated index.hhp.
++# The HHC_LOCATION tag can be used to specify the location (absolute path
++# including file name) of the HTML help compiler ( hhc.exe). If non-empty
++# doxygen will try to run the HTML help compiler on the generated index.hhp.
++# The file has to be specified with full path.
++# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
+ 
+ HHC_LOCATION           =
+ 
+-# If the GENERATE_HTMLHELP tag is set to YES, the GENERATE_CHI flag
+-# controls if a separate .chi index file is generated (YES) or that
+-# it should be included in the master .chm file (NO).
++# The GENERATE_CHI flag controls if a separate .chi index file is generated (
++# YES) or that it should be included in the master .chm file ( NO).
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
+ 
+ GENERATE_CHI           = NO
+ 
+-# If the GENERATE_HTMLHELP tag is set to YES, the CHM_INDEX_ENCODING
+-# is used to encode HtmlHelp index (hhk), content (hhc) and project file
+-# content.
++# The CHM_INDEX_ENCODING is used to encode HtmlHelp index ( hhk), content ( hhc)
++# and project file content.
++# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
+ 
+ CHM_INDEX_ENCODING     =
+ 
+-# If the GENERATE_HTMLHELP tag is set to YES, the BINARY_TOC flag
+-# controls whether a binary table of contents is generated (YES) or a
+-# normal table of contents (NO) in the .chm file.
++# The BINARY_TOC flag controls whether a binary table of contents is generated (
++# YES) or a normal table of contents ( NO) in the .chm file.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
+ 
+ BINARY_TOC             = NO
+ 
+-# The TOC_EXPAND flag can be set to YES to add extra items for group members
+-# to the contents of the HTML help documentation and to the tree view.
++# The TOC_EXPAND flag can be set to YES to add extra items for group members to
++# the table of contents of the HTML help documentation and to the tree view.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTMLHELP is set to YES.
+ 
+ TOC_EXPAND             = NO
+ 
+ # If the GENERATE_QHP tag is set to YES and both QHP_NAMESPACE and
+-# QHP_VIRTUAL_FOLDER are set, an additional index file will be generated
+-# that can be used as input for Qt's qhelpgenerator to generate a
+-# Qt Compressed Help (.qch) of the generated HTML documentation.
++# QHP_VIRTUAL_FOLDER are set, an additional index file will be generated that
++# can be used as input for Qt's qhelpgenerator to generate a Qt Compressed Help
++# (.qch) of the generated HTML documentation.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ GENERATE_QHP           = NO
+ 
+-# If the QHG_LOCATION tag is specified, the QCH_FILE tag can
+-# be used to specify the file name of the resulting .qch file.
+-# The path specified is relative to the HTML output folder.
++# If the QHG_LOCATION tag is specified, the QCH_FILE tag can be used to specify
++# the file name of the resulting .qch file. The path specified is relative to
++# the HTML output folder.
++# This tag requires that the tag GENERATE_QHP is set to YES.
+ 
+ QCH_FILE               =
+ 
+-# The QHP_NAMESPACE tag specifies the namespace to use when generating
+-# Qt Help Project output. For more information please see
+-# http://doc.trolltech.com/qthelpproject.html#namespace
++# The QHP_NAMESPACE tag specifies the namespace to use when generating Qt Help
++# Project output. For more information please see Qt Help Project / Namespace
++# (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#namespace).
++# The default value is: org.doxygen.Project.
++# This tag requires that the tag GENERATE_QHP is set to YES.
+ 
+ QHP_NAMESPACE          = org.doxygen.Project
+ 
+-# The QHP_VIRTUAL_FOLDER tag specifies the namespace to use when generating
+-# Qt Help Project output. For more information please see
+-# http://doc.trolltech.com/qthelpproject.html#virtual-folders
++# The QHP_VIRTUAL_FOLDER tag specifies the namespace to use when generating Qt
++# Help Project output. For more information please see Qt Help Project / Virtual
++# Folders (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#virtual-
++# folders).
++# The default value is: doc.
++# This tag requires that the tag GENERATE_QHP is set to YES.
+ 
+ QHP_VIRTUAL_FOLDER     = doc
+ 
+-# If QHP_CUST_FILTER_NAME is set, it specifies the name of a custom filter to
+-# add. For more information please see
+-# http://doc.trolltech.com/qthelpproject.html#custom-filters
++# If the QHP_CUST_FILTER_NAME tag is set, it specifies the name of a custom
++# filter to add. For more information please see Qt Help Project / Custom
++# Filters (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#custom-
++# filters).
++# This tag requires that the tag GENERATE_QHP is set to YES.
+ 
+ QHP_CUST_FILTER_NAME   =
+ 
+-# The QHP_CUST_FILT_ATTRS tag specifies the list of the attributes of the
+-# custom filter to add. For more information please see
+-# <a href="http://doc.trolltech.com/qthelpproject.html#custom-filters">
+-# Qt Help Project / Custom Filters</a>.
++# The QHP_CUST_FILTER_ATTRS tag specifies the list of the attributes of the
++# custom filter to add. For more information please see Qt Help Project / Custom
++# Filters (see: http://qt-project.org/doc/qt-4.8/qthelpproject.html#custom-
++# filters).
++# This tag requires that the tag GENERATE_QHP is set to YES.
+ 
+ QHP_CUST_FILTER_ATTRS  =
+ 
+ # The QHP_SECT_FILTER_ATTRS tag specifies the list of the attributes this
+-# project's
+-# filter section matches.
+-# <a href="http://doc.trolltech.com/qthelpproject.html#filter-attributes">
+-# Qt Help Project / Filter Attributes</a>.
++# project's filter section matches. Qt Help Project / Filter Attributes (see:
++# http://qt-project.org/doc/qt-4.8/qthelpproject.html#filter-attributes).
++# This tag requires that the tag GENERATE_QHP is set to YES.
+ 
+ QHP_SECT_FILTER_ATTRS  =
+ 
+-# If the GENERATE_QHP tag is set to YES, the QHG_LOCATION tag can
+-# be used to specify the location of Qt's qhelpgenerator.
+-# If non-empty doxygen will try to run qhelpgenerator on the generated
+-# .qhp file.
++# The QHG_LOCATION tag can be used to specify the location of Qt's
++# qhelpgenerator. If non-empty doxygen will try to run qhelpgenerator on the
++# generated .qhp file.
++# This tag requires that the tag GENERATE_QHP is set to YES.
+ 
+ QHG_LOCATION           =
+ 
+-# If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files
+-#  will be generated, which together with the HTML files, form an Eclipse help
+-# plugin. To install this plugin and make it available under the help contents
+-# menu in Eclipse, the contents of the directory containing the HTML and XML
+-# files needs to be copied into the plugins directory of eclipse. The name of
+-# the directory within the plugins directory should be the same as
+-# the ECLIPSE_DOC_ID value. After copying Eclipse needs to be restarted before
+-# the help appears.
++# If the GENERATE_ECLIPSEHELP tag is set to YES, additional index files will be
++# generated, together with the HTML files, they form an Eclipse help plugin. To
++# install this plugin and make it available under the help contents menu in
++# Eclipse, the contents of the directory containing the HTML and XML files needs
++# to be copied into the plugins directory of eclipse. The name of the directory
++# within the plugins directory should be the same as the ECLIPSE_DOC_ID value.
++# After copying Eclipse needs to be restarted before the help appears.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ GENERATE_ECLIPSEHELP   = NO
+ 
+-# A unique identifier for the eclipse help plugin. When installing the plugin
+-# the directory name containing the HTML and XML files should also have
+-# this name.
++# A unique identifier for the Eclipse help plugin. When installing the plugin
++# the directory name containing the HTML and XML files should also have this
++# name. Each documentation set should have its own identifier.
++# The default value is: org.doxygen.Project.
++# This tag requires that the tag GENERATE_ECLIPSEHELP is set to YES.
+ 
+ ECLIPSE_DOC_ID         = org.doxygen.Project
+ 
+-# The DISABLE_INDEX tag can be used to turn on/off the condensed index at
+-# top of each HTML page. The value NO (the default) enables the index and
+-# the value YES disables it.
++# If you want full control over the layout of the generated HTML pages it might
++# be necessary to disable the index and replace it with your own. The
++# DISABLE_INDEX tag can be used to turn on/off the condensed index (tabs) at top
++# of each HTML page. A value of NO enables the index and the value YES disables
++# it. Since the tabs in the index contain the same information as the navigation
++# tree, you can set this option to YES if you also set GENERATE_TREEVIEW to YES.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ DISABLE_INDEX          = NO
+ 
+-# The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values
+-# (range [0,1..20]) that doxygen will group on one line in the generated HTML
+-# documentation. Note that a value of 0 will completely suppress the enum
+-# values from appearing in the overview section.
+-
+-ENUM_VALUES_PER_LINE   = 4
+-
+ # The GENERATE_TREEVIEW tag is used to specify whether a tree-like index
+-# structure should be generated to display hierarchical information.
+-# If the tag value is set to YES, a side panel will be generated
+-# containing a tree-like index structure (just like the one that
+-# is generated for HTML Help). For this to work a browser that supports
+-# JavaScript, DHTML, CSS and frames is required (i.e. any modern browser).
+-# Windows users are probably better off using the HTML help feature.
++# structure should be generated to display hierarchical information. If the tag
++# value is set to YES, a side panel will be generated containing a tree-like
++# index structure (just like the one that is generated for HTML Help). For this
++# to work a browser that supports JavaScript, DHTML, CSS and frames is required
++# (i.e. any modern browser). Windows users are probably better off using the
++# HTML help feature. Via custom stylesheets (see HTML_EXTRA_STYLESHEET) one can
++# further fine-tune the look of the index. As an example, the default style
++# sheet generated by doxygen has an example that shows how to put an image at
++# the root of the tree instead of the PROJECT_NAME. Since the tree basically has
++# the same information as the tab index, you could consider setting
++# DISABLE_INDEX to YES when enabling this option.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ GENERATE_TREEVIEW      = NO
+ 
+-# By enabling USE_INLINE_TREES, doxygen will generate the Groups, Directories,
+-# and Class Hierarchy pages using a tree view instead of an ordered list.
++# The ENUM_VALUES_PER_LINE tag can be used to set the number of enum values that
++# doxygen will group on one line in the generated HTML documentation.
++#
++# Note that a value of 0 will completely suppress the enum values from appearing
++# in the overview section.
++# Minimum value: 0, maximum value: 20, default value: 4.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+-USE_INLINE_TREES       = NO
++ENUM_VALUES_PER_LINE   = 4
+ 
+-# If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be
+-# used to set the initial width (in pixels) of the frame in which the tree
+-# is shown.
++# If the treeview is enabled (see GENERATE_TREEVIEW) then this tag can be used
++# to set the initial width (in pixels) of the frame in which the tree is shown.
++# Minimum value: 0, maximum value: 1500, default value: 250.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ TREEVIEW_WIDTH         = 250
+ 
+-# When the EXT_LINKS_IN_WINDOW option is set to YES doxygen will open
+-# links to external symbols imported via tag files in a separate window.
++# When the EXT_LINKS_IN_WINDOW option is set to YES doxygen will open links to
++# external symbols imported via tag files in a separate window.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ EXT_LINKS_IN_WINDOW    = NO
+ 
+-# Use this tag to change the font size of Latex formulas included
+-# as images in the HTML documentation. The default is 10. Note that
+-# when you change the font size after a successful doxygen run you need
+-# to manually remove any form_*.png images from the HTML output directory
+-# to force them to be regenerated.
++# Use this tag to change the font size of LaTeX formulas included as images in
++# the HTML documentation. When you change the font size after a successful
++# doxygen run you need to manually remove any form_*.png images from the HTML
++# output directory to force them to be regenerated.
++# Minimum value: 8, maximum value: 50, default value: 10.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ FORMULA_FONTSIZE       = 10
+ 
+ # Use the FORMULA_TRANPARENT tag to determine whether or not the images
+-# generated for formulas are transparent PNGs. Transparent PNGs are
+-# not supported properly for IE 6.0, but are supported on all modern browsers.
+-# Note that when changing this option you need to delete any form_*.png files
+-# in the HTML output before the changes have effect.
++# generated for formulas are transparent PNGs. Transparent PNGs are not
++# supported properly for IE 6.0, but are supported on all modern browsers.
++#
++# Note that when changing this option you need to delete any form_*.png files in
++# the HTML output directory before the changes have effect.
++# The default value is: YES.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ FORMULA_TRANSPARENT    = YES
+ 
+-# Enable the USE_MATHJAX option to render LaTeX formulas using MathJax
+-# (see http://www.mathjax.org) which uses client side Javascript for the
+-# rendering instead of using prerendered bitmaps. Use this if you do not
+-# have LaTeX installed or if you want to formulas look prettier in the HTML
+-# output. When enabled you also need to install MathJax separately and
+-# configure the path to it using the MATHJAX_RELPATH option.
++# Enable the USE_MATHJAX option to render LaTeX formulas using MathJax (see
++# http://www.mathjax.org) which uses client side Javascript for the rendering
++# instead of using prerendered bitmaps. Use this if you do not have LaTeX
++# installed or if you want to formulas look prettier in the HTML output. When
++# enabled you may also need to install MathJax separately and configure the path
++# to it using the MATHJAX_RELPATH option.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ USE_MATHJAX            = NO
+ 
+-# When MathJax is enabled you need to specify the location relative to the
+-# HTML output directory using the MATHJAX_RELPATH option. The destination
+-# directory should contain the MathJax.js script. For instance, if the mathjax
+-# directory is located at the same level as the HTML output directory, then
+-# MATHJAX_RELPATH should be ../mathjax. The default value points to the
+-# mathjax.org site, so you can quickly see the result without installing
+-# MathJax, but it is strongly recommended to install a local copy of MathJax
+-# before deployment.
++# When MathJax is enabled you can set the default output format to be used for
++# the MathJax output. See the MathJax site (see:
++# http://docs.mathjax.org/en/latest/output.html) for more details.
++# Possible values are: HTML-CSS (which is slower, but has the best
++# compatibility), NativeMML (i.e. MathML) and SVG.
++# The default value is: HTML-CSS.
++# This tag requires that the tag USE_MATHJAX is set to YES.
++
++MATHJAX_FORMAT         = HTML-CSS
++
++# When MathJax is enabled you need to specify the location relative to the HTML
++# output directory using the MATHJAX_RELPATH option. The destination directory
++# should contain the MathJax.js script. For instance, if the mathjax directory
++# is located at the same level as the HTML output directory, then
++# MATHJAX_RELPATH should be ../mathjax. The default value points to the MathJax
++# Content Delivery Network so you can quickly see the result without installing
++# MathJax. However, it is strongly recommended to install a local copy of
++# MathJax from http://www.mathjax.org before deployment.
++# The default value is: http://cdn.mathjax.org/mathjax/latest.
++# This tag requires that the tag USE_MATHJAX is set to YES.
+ 
+ MATHJAX_RELPATH        = http://www.mathjax.org/mathjax
+ 
+-# The MATHJAX_EXTENSIONS tag can be used to specify one or MathJax extension
+-# names that should be enabled during MathJax rendering.
++# The MATHJAX_EXTENSIONS tag can be used to specify one or more MathJax
++# extension names that should be enabled during MathJax rendering. For example
++# MATHJAX_EXTENSIONS = TeX/AMSmath TeX/AMSsymbols
++# This tag requires that the tag USE_MATHJAX is set to YES.
+ 
+ MATHJAX_EXTENSIONS     =
+ 
+-# When the SEARCHENGINE tag is enabled doxygen will generate a search box
+-# for the HTML output. The underlying search engine uses javascript
+-# and DHTML and should work on any modern browser. Note that when using
+-# HTML help (GENERATE_HTMLHELP), Qt help (GENERATE_QHP), or docsets
+-# (GENERATE_DOCSET) there is already a search function so this one should
+-# typically be disabled. For large projects the javascript based search engine
+-# can be slow, then enabling SERVER_BASED_SEARCH may provide a better solution.
++# The MATHJAX_CODEFILE tag can be used to specify a file with javascript pieces
++# of code that will be used on startup of the MathJax code. See the MathJax site
++# (see: http://docs.mathjax.org/en/latest/output.html) for more details. For an
++# example see the documentation.
++# This tag requires that the tag USE_MATHJAX is set to YES.
++
++MATHJAX_CODEFILE       =
++
++# When the SEARCHENGINE tag is enabled doxygen will generate a search box for
++# the HTML output. The underlying search engine uses javascript and DHTML and
++# should work on any modern browser. Note that when using HTML help
++# (GENERATE_HTMLHELP), Qt help (GENERATE_QHP), or docsets (GENERATE_DOCSET)
++# there is already a search function so this one should typically be disabled.
++# For large projects the javascript based search engine can be slow, then
++# enabling SERVER_BASED_SEARCH may provide a better solution. It is possible to
++# search using the keyboard; to jump to the search box use <access key> + S
++# (what the <access key> is depends on the OS and browser, but it is typically
++# <CTRL>, <ALT>/<option>, or both). Inside the search box use the <cursor down
++# key> to jump into the search results window, the results can be navigated
++# using the <cursor keys>. Press <Enter> to select an item or <escape> to cancel
++# the search. The filter options can be selected when the cursor is inside the
++# search box by pressing <Shift>+<cursor down>. Also here use the <cursor keys>
++# to select a filter and <Enter> or <escape> to activate or cancel the filter
++# option.
++# The default value is: YES.
++# This tag requires that the tag GENERATE_HTML is set to YES.
+ 
+ SEARCHENGINE           = YES
+ 
+ # When the SERVER_BASED_SEARCH tag is enabled the search engine will be
+-# implemented using a PHP enabled web server instead of at the web client
+-# using Javascript. Doxygen will generate the search PHP script and index
+-# file to put on the web server. The advantage of the server
+-# based approach is that it scales better to large projects and allows
+-# full text search. The disadvantages are that it is more difficult to setup
+-# and does not have live searching capabilities.
++# implemented using a web server instead of a web client using Javascript. There
++# are two flavours of web server based searching depending on the
++# EXTERNAL_SEARCH setting. When disabled, doxygen will generate a PHP script for
++# searching and an index file used by the script. When EXTERNAL_SEARCH is
++# enabled the indexing and searching needs to be provided by external tools. See
++# the section "External Indexing and Searching" for details.
++# The default value is: NO.
++# This tag requires that the tag SEARCHENGINE is set to YES.
+ 
+ SERVER_BASED_SEARCH    = NO
+ 
++# When EXTERNAL_SEARCH tag is enabled doxygen will no longer generate the PHP
++# script for searching. Instead the search results are written to an XML file
++# which needs to be processed by an external indexer. Doxygen will invoke an
++# external search engine pointed to by the SEARCHENGINE_URL option to obtain the
++# search results.
++#
++# Doxygen ships with an example indexer ( doxyindexer) and search engine
++# (doxysearch.cgi) which are based on the open source search engine library
++# Xapian (see: http://xapian.org/).
++#
++# See the section "External Indexing and Searching" for details.
++# The default value is: NO.
++# This tag requires that the tag SEARCHENGINE is set to YES.
++
++EXTERNAL_SEARCH        = NO
++
++# The SEARCHENGINE_URL should point to a search engine hosted by a web server
++# which will return the search results when EXTERNAL_SEARCH is enabled.
++#
++# Doxygen ships with an example indexer ( doxyindexer) and search engine
++# (doxysearch.cgi) which are based on the open source search engine library
++# Xapian (see: http://xapian.org/). See the section "External Indexing and
++# Searching" for details.
++# This tag requires that the tag SEARCHENGINE is set to YES.
++
++SEARCHENGINE_URL       =
++
++# When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the unindexed
++# search data is written to a file for indexing by an external tool. With the
++# SEARCHDATA_FILE tag the name of this file can be specified.
++# The default file is: searchdata.xml.
++# This tag requires that the tag SEARCHENGINE is set to YES.
++
++SEARCHDATA_FILE        = searchdata.xml
++
++# When SERVER_BASED_SEARCH and EXTERNAL_SEARCH are both enabled the
++# EXTERNAL_SEARCH_ID tag can be used as an identifier for the project. This is
++# useful in combination with EXTRA_SEARCH_MAPPINGS to search through multiple
++# projects and redirect the results back to the right project.
++# This tag requires that the tag SEARCHENGINE is set to YES.
++
++EXTERNAL_SEARCH_ID     =
++
++# The EXTRA_SEARCH_MAPPINGS tag can be used to enable searching through doxygen
++# projects other than the one defined by this configuration file, but that are
++# all added to the same external search index. Each project needs to have a
++# unique id set via EXTERNAL_SEARCH_ID. The search mapping then maps the id of
++# to a relative location where the documentation can be found. The format is:
++# EXTRA_SEARCH_MAPPINGS = tagname1=loc1 tagname2=loc2 ...
++# This tag requires that the tag SEARCHENGINE is set to YES.
++
++EXTRA_SEARCH_MAPPINGS  =
++
+ #---------------------------------------------------------------------------
+-# configuration options related to the LaTeX output
++# Configuration options related to the LaTeX output
+ #---------------------------------------------------------------------------
+ 
+-# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
+-# generate Latex output.
++# If the GENERATE_LATEX tag is set to YES doxygen will generate LaTeX output.
++# The default value is: YES.
+ 
+ GENERATE_LATEX         = $(GENERATE_LATEX)
+ 
+-# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
+-# If a relative path is entered the value of OUTPUT_DIRECTORY will be
+-# put in front of it. If left blank `latex' will be used as the default path.
++# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. If a
++# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
++# it.
++# The default directory is: latex.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ LATEX_OUTPUT           = latex
+ 
+ # The LATEX_CMD_NAME tag can be used to specify the LaTeX command name to be
+-# invoked. If left blank `latex' will be used as the default command name.
+-# Note that when enabling USE_PDFLATEX this option is only used for
+-# generating bitmaps for formulas in the HTML output, but not in the
+-# Makefile that is written to the output directory.
++# invoked.
++#
++# Note that when enabling USE_PDFLATEX this option is only used for generating
++# bitmaps for formulas in the HTML output, but not in the Makefile that is
++# written to the output directory.
++# The default file is: latex.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ LATEX_CMD_NAME         = latex
+ 
+-# The MAKEINDEX_CMD_NAME tag can be used to specify the command name to
+-# generate index for LaTeX. If left blank `makeindex' will be used as the
+-# default command name.
++# The MAKEINDEX_CMD_NAME tag can be used to specify the command name to generate
++# index for LaTeX.
++# The default file is: makeindex.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ MAKEINDEX_CMD_NAME     = makeindex
+ 
+-# If the COMPACT_LATEX tag is set to YES Doxygen generates more compact
+-# LaTeX documents. This may be useful for small projects and may help to
+-# save some trees in general.
++# If the COMPACT_LATEX tag is set to YES doxygen generates more compact LaTeX
++# documents. This may be useful for small projects and may help to save some
++# trees in general.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ COMPACT_LATEX          = NO
+ 
+-# The PAPER_TYPE tag can be used to set the paper type that is used
+-# by the printer. Possible values are: a4, letter, legal and
+-# executive. If left blank a4wide will be used.
++# The PAPER_TYPE tag can be used to set the paper type that is used by the
++# printer.
++# Possible values are: a4 (210 x 297 mm), letter (8.5 x 11 inches), legal (8.5 x
++# 14 inches) and executive (7.25 x 10.5 inches).
++# The default value is: a4.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ PAPER_TYPE             = $(PAPER_SIZE)
+ 
+-# The EXTRA_PACKAGES tag can be to specify one or more names of LaTeX
+-# packages that should be included in the LaTeX output.
++# The EXTRA_PACKAGES tag can be used to specify one or more LaTeX package names
++# that should be included in the LaTeX output. To get the times font for
++# instance you can specify
++# EXTRA_PACKAGES=times
++# If left blank no extra packages will be included.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ EXTRA_PACKAGES         =
+ 
+-# The LATEX_HEADER tag can be used to specify a personal LaTeX header for
+-# the generated latex document. The header should contain everything until
+-# the first chapter. If it is left blank doxygen will generate a
+-# standard header. Notice: only use this tag if you know what you are doing!
++# The LATEX_HEADER tag can be used to specify a personal LaTeX header for the
++# generated LaTeX document. The header should contain everything until the first
++# chapter. If it is left blank doxygen will generate a standard header. See
++# section "Doxygen usage" for information on how to let doxygen write the
++# default header to a separate file.
++#
++# Note: Only use a user-defined header if you know what you are doing! The
++# following commands have a special meaning inside the header: $title,
++# $datetime, $date, $doxygenversion, $projectname, $projectnumber. Doxygen will
++# replace them by respectively the title of the page, the current date and time,
++# only the current date, the version number of doxygen, the project name (see
++# PROJECT_NAME), or the project number (see PROJECT_NUMBER).
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ LATEX_HEADER           =
+ 
+-# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for
+-# the generated latex document. The footer should contain everything after
+-# the last chapter. If it is left blank doxygen will generate a
+-# standard footer. Notice: only use this tag if you know what you are doing!
++# The LATEX_FOOTER tag can be used to specify a personal LaTeX footer for the
++# generated LaTeX document. The footer should contain everything after the last
++# chapter. If it is left blank doxygen will generate a standard footer.
++#
++# Note: Only use a user-defined footer if you know what you are doing!
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ LATEX_FOOTER           =
+ 
+-# If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated
+-# is prepared for conversion to pdf (using ps2pdf). The pdf file will
+-# contain links (just like the HTML output) instead of page references
+-# This makes the output suitable for online browsing using a pdf viewer.
++# The LATEX_EXTRA_FILES tag can be used to specify one or more extra images or
++# other source files which should be copied to the LATEX_OUTPUT output
++# directory. Note that the files will be copied as-is; there are no commands or
++# markers available.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
++
++LATEX_EXTRA_FILES      =
++
++# If the PDF_HYPERLINKS tag is set to YES, the LaTeX that is generated is
++# prepared for conversion to PDF (using ps2pdf or pdflatex). The PDF file will
++# contain links (just like the HTML output) instead of page references. This
++# makes the output suitable for online browsing using a PDF viewer.
++# The default value is: YES.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ PDF_HYPERLINKS         = YES
+ 
+-# If the USE_PDFLATEX tag is set to YES, pdflatex will be used instead of
+-# plain latex in the generated Makefile. Set this option to YES to get a
++# If the LATEX_PDFLATEX tag is set to YES, doxygen will use pdflatex to generate
++# the PDF file directly from the LaTeX files. Set this option to YES to get a
+ # higher quality PDF documentation.
++# The default value is: YES.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ USE_PDFLATEX           = YES
+ 
+-# If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \\batchmode.
+-# command to the generated LaTeX files. This will instruct LaTeX to keep
+-# running if errors occur, instead of asking the user for help.
+-# This option is also used when generating formulas in HTML.
++# If the LATEX_BATCHMODE tag is set to YES, doxygen will add the \batchmode
++# command to the generated LaTeX files. This will instruct LaTeX to keep running
++# if errors occur, instead of asking the user for help. This option is also used
++# when generating formulas in HTML.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ LATEX_BATCHMODE        = NO
+ 
+-# If LATEX_HIDE_INDICES is set to YES then doxygen will not
+-# include the index chapters (such as File Index, Compound Index, etc.)
+-# in the output.
++# If the LATEX_HIDE_INDICES tag is set to YES then doxygen will not include the
++# index chapters (such as File Index, Compound Index, etc.) in the output.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ LATEX_HIDE_INDICES     = NO
+ 
+-# If LATEX_SOURCE_CODE is set to YES then doxygen will include
+-# source code with syntax highlighting in the LaTeX output.
+-# Note that which sources are shown also depends on other settings
+-# such as SOURCE_BROWSER.
++# If the LATEX_SOURCE_CODE tag is set to YES then doxygen will include source
++# code with syntax highlighting in the LaTeX output.
++#
++# Note that which sources are shown also depends on other settings such as
++# SOURCE_BROWSER.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ LATEX_SOURCE_CODE      = NO
+ 
+ # The LATEX_BIB_STYLE tag can be used to specify the style to use for the
+-# bibliography, e.g. plainnat, or ieeetr. The default style is "plain". See
+-# http://en.wikipedia.org/wiki/BibTeX for more info.
++# bibliography, e.g. plainnat, or ieeetr. See
++# http://en.wikipedia.org/wiki/BibTeX and \cite for more info.
++# The default value is: plain.
++# This tag requires that the tag GENERATE_LATEX is set to YES.
+ 
+ LATEX_BIB_STYLE        = plain
+ 
+ #---------------------------------------------------------------------------
+-# configuration options related to the RTF output
++# Configuration options related to the RTF output
+ #---------------------------------------------------------------------------
+ 
+-# If the GENERATE_RTF tag is set to YES Doxygen will generate RTF output
+-# The RTF output is optimized for Word 97 and may not look very pretty with
+-# other RTF readers or editors.
++# If the GENERATE_RTF tag is set to YES doxygen will generate RTF output. The
++# RTF output is optimized for Word 97 and may not look too pretty with other RTF
++# readers/editors.
++# The default value is: NO.
+ 
+ GENERATE_RTF           = NO
+ 
+-# The RTF_OUTPUT tag is used to specify where the RTF docs will be put.
+-# If a relative path is entered the value of OUTPUT_DIRECTORY will be
+-# put in front of it. If left blank `rtf' will be used as the default path.
++# The RTF_OUTPUT tag is used to specify where the RTF docs will be put. If a
++# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
++# it.
++# The default directory is: rtf.
++# This tag requires that the tag GENERATE_RTF is set to YES.
+ 
+ RTF_OUTPUT             = rtf
+ 
+-# If the COMPACT_RTF tag is set to YES Doxygen generates more compact
+-# RTF documents. This may be useful for small projects and may help to
+-# save some trees in general.
++# If the COMPACT_RTF tag is set to YES doxygen generates more compact RTF
++# documents. This may be useful for small projects and may help to save some
++# trees in general.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_RTF is set to YES.
+ 
+ COMPACT_RTF            = NO
+ 
+-# If the RTF_HYPERLINKS tag is set to YES, the RTF that is generated
+-# will contain hyperlink fields. The RTF file will
+-# contain links (just like the HTML output) instead of page references.
+-# This makes the output suitable for online browsing using WORD or other
+-# programs which support those fields.
+-# Note: wordpad (write) and others do not support links.
++# If the RTF_HYPERLINKS tag is set to YES, the RTF that is generated will
++# contain hyperlink fields. The RTF file will contain links (just like the HTML
++# output) instead of page references. This makes the output suitable for online
++# browsing using Word or some other Word compatible readers that support those
++# fields.
++#
++# Note: WordPad (write) and others do not support links.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_RTF is set to YES.
+ 
+ RTF_HYPERLINKS         = NO
+ 
+-# Load stylesheet definitions from file. Syntax is similar to doxygen's
+-# config file, i.e. a series of assignments. You only have to provide
+-# replacements, missing definitions are set to their default value.
++# Load stylesheet definitions from file. Syntax is similar to doxygen's config
++# file, i.e. a series of assignments. You only have to provide replacements,
++# missing definitions are set to their default value.
++#
++# See also section "Doxygen usage" for information on how to generate the
++# default style sheet that doxygen normally uses.
++# This tag requires that the tag GENERATE_RTF is set to YES.
+ 
+ RTF_STYLESHEET_FILE    =
+ 
+-# Set optional variables used in the generation of an rtf document.
+-# Syntax is similar to doxygen's config file.
++# Set optional variables used in the generation of an RTF document. Syntax is
++# similar to doxygen's config file. A template extensions file can be generated
++# using doxygen -e rtf extensionFile.
++# This tag requires that the tag GENERATE_RTF is set to YES.
+ 
+ RTF_EXTENSIONS_FILE    =
+ 
+ #---------------------------------------------------------------------------
+-# configuration options related to the man page output
++# Configuration options related to the man page output
+ #---------------------------------------------------------------------------
+ 
+-# If the GENERATE_MAN tag is set to YES (the default) Doxygen will
+-# generate man pages
++# If the GENERATE_MAN tag is set to YES doxygen will generate man pages for
++# classes and files.
++# The default value is: NO.
+ 
+ GENERATE_MAN           = $(GENERATE_MAN)
+ 
+-# The MAN_OUTPUT tag is used to specify where the man pages will be put.
+-# If a relative path is entered the value of OUTPUT_DIRECTORY will be
+-# put in front of it. If left blank `man' will be used as the default path.
++# The MAN_OUTPUT tag is used to specify where the man pages will be put. If a
++# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
++# it. A directory man3 will be created inside the directory specified by
++# MAN_OUTPUT.
++# The default directory is: man.
++# This tag requires that the tag GENERATE_MAN is set to YES.
+ 
+ MAN_OUTPUT             = man
+ 
+-# The MAN_EXTENSION tag determines the extension that is added to
+-# the generated man pages (default is the subroutine's section .3)
++# The MAN_EXTENSION tag determines the extension that is added to the generated
++# man pages. In case the manual section does not start with a number, the number
++# 3 is prepended. The dot (.) at the beginning of the MAN_EXTENSION tag is
++# optional.
++# The default value is: .3.
++# This tag requires that the tag GENERATE_MAN is set to YES.
+ 
+ MAN_EXTENSION          = .3
+ 
+-# If the MAN_LINKS tag is set to YES and Doxygen generates man output,
+-# then it will generate one additional man file for each entity
+-# documented in the real man page(s). These additional files
+-# only source the real man page, but without them the man command
+-# would be unable to find the correct page. The default is NO.
++# If the MAN_LINKS tag is set to YES and doxygen generates man output, then it
++# will generate one additional man file for each entity documented in the real
++# man page(s). These additional files only source the real man page, but without
++# them the man command would be unable to find the correct page.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_MAN is set to YES.
+ 
+ MAN_LINKS              = NO
+ 
+ #---------------------------------------------------------------------------
+-# configuration options related to the XML output
++# Configuration options related to the XML output
+ #---------------------------------------------------------------------------
+ 
+-# If the GENERATE_XML tag is set to YES Doxygen will
+-# generate an XML file that captures the structure of
+-# the code including all documentation.
++# If the GENERATE_XML tag is set to YES doxygen will generate an XML file that
++# captures the structure of the code including all documentation.
++# The default value is: NO.
+ 
+ GENERATE_XML           = NO
+ 
+-# The XML_OUTPUT tag is used to specify where the XML pages will be put.
+-# If a relative path is entered the value of OUTPUT_DIRECTORY will be
+-# put in front of it. If left blank `xml' will be used as the default path.
++# The XML_OUTPUT tag is used to specify where the XML pages will be put. If a
++# relative path is entered the value of OUTPUT_DIRECTORY will be put in front of
++# it.
++# The default directory is: xml.
++# This tag requires that the tag GENERATE_XML is set to YES.
+ 
+ XML_OUTPUT             = xml
+ 
+-# The XML_SCHEMA tag can be used to specify an XML schema,
+-# which can be used by a validating XML parser to check the
+-# syntax of the XML files.
++# The XML_SCHEMA tag can be used to specify a XML schema, which can be used by a
++# validating XML parser to check the syntax of the XML files.
++# This tag requires that the tag GENERATE_XML is set to YES.
+ 
+ XML_SCHEMA             =
+ 
+-# The XML_DTD tag can be used to specify an XML DTD,
+-# which can be used by a validating XML parser to check the
+-# syntax of the XML files.
++# The XML_DTD tag can be used to specify a XML DTD, which can be used by a
++# validating XML parser to check the syntax of the XML files.
++# This tag requires that the tag GENERATE_XML is set to YES.
+ 
+ XML_DTD                =
+ 
+-# If the XML_PROGRAMLISTING tag is set to YES Doxygen will
+-# dump the program listings (including syntax highlighting
+-# and cross-referencing information) to the XML output. Note that
+-# enabling this will significantly increase the size of the XML output.
++# If the XML_PROGRAMLISTING tag is set to YES doxygen will dump the program
++# listings (including syntax highlighting and cross-referencing information) to
++# the XML output. Note that enabling this will significantly increase the size
++# of the XML output.
++# The default value is: YES.
++# This tag requires that the tag GENERATE_XML is set to YES.
+ 
+ XML_PROGRAMLISTING     = YES
+ 
+ #---------------------------------------------------------------------------
+-# configuration options for the AutoGen Definitions output
++# Configuration options related to the DOCBOOK output
+ #---------------------------------------------------------------------------
+ 
+-# If the GENERATE_AUTOGEN_DEF tag is set to YES Doxygen will
+-# generate an AutoGen Definitions (see autogen.sf.net) file
+-# that captures the structure of the code including all
+-# documentation. Note that this feature is still experimental
+-# and incomplete at the moment.
++# If the GENERATE_DOCBOOK tag is set to YES doxygen will generate Docbook files
++# that can be used to generate PDF.
++# The default value is: NO.
++
++GENERATE_DOCBOOK       = NO
++
++# The DOCBOOK_OUTPUT tag is used to specify where the Docbook pages will be put.
++# If a relative path is entered the value of OUTPUT_DIRECTORY will be put in
++# front of it.
++# The default directory is: docbook.
++# This tag requires that the tag GENERATE_DOCBOOK is set to YES.
++
++DOCBOOK_OUTPUT         = docbook
++
++#---------------------------------------------------------------------------
++# Configuration options for the AutoGen Definitions output
++#---------------------------------------------------------------------------
++
++# If the GENERATE_AUTOGEN_DEF tag is set to YES doxygen will generate an AutoGen
++# Definitions (see http://autogen.sf.net) file that captures the structure of
++# the code including all documentation. Note that this feature is still
++# experimental and incomplete at the moment.
++# The default value is: NO.
+ 
+ GENERATE_AUTOGEN_DEF   = NO
+ 
+ #---------------------------------------------------------------------------
+-# configuration options related to the Perl module output
++# Configuration options related to the Perl module output
+ #---------------------------------------------------------------------------
+ 
+-# If the GENERATE_PERLMOD tag is set to YES Doxygen will
+-# generate a Perl module file that captures the structure of
+-# the code including all documentation. Note that this
+-# feature is still experimental and incomplete at the
+-# moment.
++# If the GENERATE_PERLMOD tag is set to YES doxygen will generate a Perl module
++# file that captures the structure of the code including all documentation.
++#
++# Note that this feature is still experimental and incomplete at the moment.
++# The default value is: NO.
+ 
+ GENERATE_PERLMOD       = NO
+ 
+-# If the PERLMOD_LATEX tag is set to YES Doxygen will generate
+-# the necessary Makefile rules, Perl scripts and LaTeX code to be able
+-# to generate PDF and DVI output from the Perl module output.
++# If the PERLMOD_LATEX tag is set to YES doxygen will generate the necessary
++# Makefile rules, Perl scripts and LaTeX code to be able to generate PDF and DVI
++# output from the Perl module output.
++# The default value is: NO.
++# This tag requires that the tag GENERATE_PERLMOD is set to YES.
+ 
+ PERLMOD_LATEX          = NO
+ 
+-# If the PERLMOD_PRETTY tag is set to YES the Perl module output will be
+-# nicely formatted so it can be parsed by a human reader.
+-# This is useful
+-# if you want to understand what is going on.
+-# On the other hand, if this
+-# tag is set to NO the size of the Perl module output will be much smaller
+-# and Perl will parse it just the same.
++# If the PERLMOD_PRETTY tag is set to YES the Perl module output will be nicely
++# formatted so it can be parsed by a human reader. This is useful if you want to
++# understand what is going on. On the other hand, if this tag is set to NO the
++# size of the Perl module output will be much smaller and Perl will parse it
++# just the same.
++# The default value is: YES.
++# This tag requires that the tag GENERATE_PERLMOD is set to YES.
+ 
+ PERLMOD_PRETTY         = YES
+ 
+-# The names of the make variables in the generated doxyrules.make file
+-# are prefixed with the string contained in PERLMOD_MAKEVAR_PREFIX.
+-# This is useful so different doxyrules.make files included by the same
+-# Makefile don't overwrite each other's variables.
++# The names of the make variables in the generated doxyrules.make file are
++# prefixed with the string contained in PERLMOD_MAKEVAR_PREFIX. This is useful
++# so different doxyrules.make files included by the same Makefile don't
++# overwrite each other's variables.
++# This tag requires that the tag GENERATE_PERLMOD is set to YES.
+ 
+ PERLMOD_MAKEVAR_PREFIX =
+ 
+@@ -1434,324 +1872,409 @@
+ # Configuration options related to the preprocessor
+ #---------------------------------------------------------------------------
+ 
+-# If the ENABLE_PREPROCESSING tag is set to YES (the default) Doxygen will
+-# evaluate all C-preprocessor directives found in the sources and include
+-# files.
++# If the ENABLE_PREPROCESSING tag is set to YES doxygen will evaluate all
++# C-preprocessor directives found in the sources and include files.
++# The default value is: YES.
+ 
+ ENABLE_PREPROCESSING   = YES
+ 
+-# If the MACRO_EXPANSION tag is set to YES Doxygen will expand all macro
+-# names in the source code. If set to NO (the default) only conditional
+-# compilation will be performed. Macro expansion can be done in a controlled
+-# way by setting EXPAND_ONLY_PREDEF to YES.
++# If the MACRO_EXPANSION tag is set to YES doxygen will expand all macro names
++# in the source code. If set to NO only conditional compilation will be
++# performed. Macro expansion can be done in a controlled way by setting
++# EXPAND_ONLY_PREDEF to YES.
++# The default value is: NO.
++# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
+ 
+ MACRO_EXPANSION        = NO
+ 
+-# If the EXPAND_ONLY_PREDEF and MACRO_EXPANSION tags are both set to YES
+-# then the macro expansion is limited to the macros specified with the
+-# PREDEFINED and EXPAND_AS_DEFINED tags.
++# If the EXPAND_ONLY_PREDEF and MACRO_EXPANSION tags are both set to YES then
++# the macro expansion is limited to the macros specified with the PREDEFINED and
++# EXPAND_AS_DEFINED tags.
++# The default value is: NO.
++# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
+ 
+ EXPAND_ONLY_PREDEF     = NO
+ 
+-# If the SEARCH_INCLUDES tag is set to YES (the default) the includes files
+-# pointed to by INCLUDE_PATH will be searched when a #include is found.
++# If the SEARCH_INCLUDES tag is set to YES the includes files in the
++# INCLUDE_PATH will be searched if a #include is found.
++# The default value is: YES.
++# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
+ 
+ SEARCH_INCLUDES        = YES
+ 
+ # The INCLUDE_PATH tag can be used to specify one or more directories that
+-# contain include files that are not input files but should be processed by
+-# the preprocessor.
++# contain include files that are not input files but should be processed by the
++# preprocessor.
++# This tag requires that the tag SEARCH_INCLUDES is set to YES.
+ 
+ INCLUDE_PATH           =
+ 
+ # You can use the INCLUDE_FILE_PATTERNS tag to specify one or more wildcard
+ # patterns (like *.h and *.hpp) to filter out the header-files in the
+-# directories. If left blank, the patterns specified with FILE_PATTERNS will
+-# be used.
++# directories. If left blank, the patterns specified with FILE_PATTERNS will be
++# used.
++# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
+ 
+ INCLUDE_FILE_PATTERNS  =
+ 
+-# The PREDEFINED tag can be used to specify one or more macro names that
+-# are defined before the preprocessor is started (similar to the -D option of
+-# gcc). The argument of the tag is a list of macros of the form: name
+-# or name=definition (no spaces). If the definition and the = are
+-# omitted =1 is assumed. To prevent a macro definition from being
+-# undefined via #undef or recursively expanded use the := operator
+-# instead of the = operator.
++# The PREDEFINED tag can be used to specify one or more macro names that are
++# defined before the preprocessor is started (similar to the -D option of e.g.
++# gcc). The argument of the tag is a list of macros of the form: name or
++# name=definition (no spaces). If the definition and the "=" are omitted, "=1"
++# is assumed. To prevent a macro definition from being undefined via #undef or
++# recursively expanded use the := operator instead of the = operator.
++# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
+ 
+ PREDEFINED             =
+ 
+-# If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then
+-# this tag can be used to specify a list of macro names that should be expanded.
+-# The macro definition that is found in the sources will be used.
+-# Use the PREDEFINED tag if you want to use a different macro definition that
+-# overrules the definition found in the source code.
++# If the MACRO_EXPANSION and EXPAND_ONLY_PREDEF tags are set to YES then this
++# tag can be used to specify a list of macro names that should be expanded. The
++# macro definition that is found in the sources will be used. Use the PREDEFINED
++# tag if you want to use a different macro definition that overrules the
++# definition found in the source code.
++# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
+ 
+ EXPAND_AS_DEFINED      =
+ 
+-# If the SKIP_FUNCTION_MACROS tag is set to YES (the default) then
+-# doxygen's preprocessor will remove all references to function-like macros
+-# that are alone on a line, have an all uppercase name, and do not end with a
+-# semicolon, because these will confuse the parser if not removed.
++# If the SKIP_FUNCTION_MACROS tag is set to YES then doxygen's preprocessor will
++# remove all refrences to function-like macros that are alone on a line, have an
++# all uppercase name, and do not end with a semicolon. Such function macros are
++# typically used for boiler-plate code, and will confuse the parser if not
++# removed.
++# The default value is: YES.
++# This tag requires that the tag ENABLE_PREPROCESSING is set to YES.
+ 
+ SKIP_FUNCTION_MACROS   = YES
+ 
+ #---------------------------------------------------------------------------
+-# Configuration::additions related to external references
++# Configuration options related to external references
+ #---------------------------------------------------------------------------
+ 
+-# The TAGFILES option can be used to specify one or more tagfiles.
+-# Optionally an initial location of the external documentation
+-# can be added for each tagfile. The format of a tag file without
+-# this location is as follows:
+-#
++# The TAGFILES tag can be used to specify one or more tag files. For each tag
++# file the location of the external documentation should be added. The format of
++# a tag file without this location is as follows:
+ # TAGFILES = file1 file2 ...
+ # Adding location for the tag files is done as follows:
+-#
+ # TAGFILES = file1=loc1 "file2 = loc2" ...
+-# where "loc1" and "loc2" can be relative or absolute paths or
+-# URLs. If a location is present for each tag, the installdox tool
+-# does not have to be run to correct the links.
+-# Note that each tag file must have a unique name
+-# (where the name does NOT include the path)
+-# If a tag file is not located in the directory in which doxygen
+-# is run, you must also specify the path to the tagfile here.
++# where loc1 and loc2 can be relative or absolute paths or URLs. See the
++# section "Linking to external documentation" for more information about the use
++# of tag files.
++# Note: Each tag file must have an unique name (where the name does NOT include
++# the path). If a tag file is not located in the directory in which doxygen is
++# run, you must also specify the path to the tagfile here.
+ 
+ TAGFILES               =
+ 
+-# When a file name is specified after GENERATE_TAGFILE, doxygen will create
+-# a tag file that is based on the input files it reads.
++# When a file name is specified after GENERATE_TAGFILE, doxygen will create a
++# tag file that is based on the input files it reads. See section "Linking to
++# external documentation" for more information about the usage of tag files.
+ 
+ GENERATE_TAGFILE       =
+ 
+-# If the ALLEXTERNALS tag is set to YES all external classes will be listed
+-# in the class index. If set to NO only the inherited external classes
+-# will be listed.
++# If the ALLEXTERNALS tag is set to YES all external class will be listed in the
++# class index. If set to NO only the inherited external classes will be listed.
++# The default value is: NO.
+ 
+ ALLEXTERNALS           = NO
+ 
+-# If the EXTERNAL_GROUPS tag is set to YES all external groups will be listed
+-# in the modules index. If set to NO, only the current project's groups will
+-# be listed.
++# If the EXTERNAL_GROUPS tag is set to YES all external groups will be listed in
++# the modules index. If set to NO, only the current project's groups will be
++# listed.
++# The default value is: YES.
+ 
+ EXTERNAL_GROUPS        = YES
+ 
++# If the EXTERNAL_PAGES tag is set to YES all external pages will be listed in
++# the related pages index. If set to NO, only the current project's pages will
++# be listed.
++# The default value is: YES.
++
++EXTERNAL_PAGES         = YES
++
+ # The PERL_PATH should be the absolute path and name of the perl script
+-# interpreter (i.e. the result of `which perl').
++# interpreter (i.e. the result of 'which perl').
++# The default file (with absolute path) is: /usr/bin/perl.
+ 
+-PERL_PATH              =  $(PERL_PATH)
++PERL_PATH              = $(PERL_PATH)
+ 
+ #---------------------------------------------------------------------------
+ # Configuration options related to the dot tool
+ #---------------------------------------------------------------------------
+ 
+-# If the CLASS_DIAGRAMS tag is set to YES (the default) Doxygen will
+-# generate a inheritance diagram (in HTML, RTF and LaTeX) for classes with base
+-# or super classes. Setting the tag to NO turns the diagrams off. Note that
+-# this option also works with HAVE_DOT disabled, but it is recommended to
+-# install and use dot, since it yields more powerful graphs.
++# If the CLASS_DIAGRAMS tag is set to YES doxygen will generate a class diagram
++# (in HTML and LaTeX) for classes with base or super classes. Setting the tag to
++# NO turns the diagrams off. Note that this option also works with HAVE_DOT
++# disabled, but it is recommended to install and use dot, since it yields more
++# powerful graphs.
++# The default value is: YES.
+ 
+ CLASS_DIAGRAMS         = YES
+ 
+ # You can define message sequence charts within doxygen comments using the \msc
+-# command. Doxygen will then run the mscgen tool (see
+-# http://www.mcternan.me.uk/mscgen/) to produce the chart and insert it in the
++# command. Doxygen will then run the mscgen tool (see:
++# http://www.mcternan.me.uk/mscgen/)) to produce the chart and insert it in the
+ # documentation. The MSCGEN_PATH tag allows you to specify the directory where
+ # the mscgen tool resides. If left empty the tool is assumed to be found in the
+ # default search path.
+ 
+ MSCGEN_PATH            =
+ 
+-# If set to YES, the inheritance and collaboration graphs will hide
+-# inheritance and usage relations if the target is undocumented
+-# or is not a class.
++# If set to YES, the inheritance and collaboration graphs will hide inheritance
++# and usage relations if the target is undocumented or is not a class.
++# The default value is: YES.
+ 
+ HIDE_UNDOC_RELATIONS   = YES
+ 
+ # If you set the HAVE_DOT tag to YES then doxygen will assume the dot tool is
+-# available from the path. This tool is part of Graphviz, a graph visualization
+-# toolkit from AT&T and Lucent Bell Labs. The other options in this section
+-# have no effect if this option is set to NO (the default)
++# available from the path. This tool is part of Graphviz (see:
++# http://www.graphviz.org/), a graph visualization toolkit from AT&T and Lucent
++# Bell Labs. The other options in this section have no effect if this option is
++# set to NO
++# The default value is: NO.
+ 
+ HAVE_DOT               = $(HAVE_DOT)
+ 
+-# The DOT_NUM_THREADS specifies the number of dot invocations doxygen is
+-# allowed to run in parallel. When set to 0 (the default) doxygen will
+-# base this on the number of processors available in the system. You can set it
+-# explicitly to a value larger than 0 to get control over the balance
+-# between CPU load and processing speed.
++# The DOT_NUM_THREADS specifies the number of dot invocations doxygen is allowed
++# to run in parallel. When set to 0 doxygen will base this on the number of
++# processors available in the system. You can set it explicitly to a value
++# larger than 0 to get control over the balance between CPU load and processing
++# speed.
++# Minimum value: 0, maximum value: 32, default value: 0.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_NUM_THREADS        = 0
+ 
+-# By default doxygen will use the Helvetica font for all dot files that
+-# doxygen generates. When you want a differently looking font you can specify
+-# the font name using DOT_FONTNAME. You need to make sure dot is able to find
+-# the font, which can be done by putting it in a standard location or by setting
+-# the DOTFONTPATH environment variable or by setting DOT_FONTPATH to the
+-# directory containing the font.
++# When you want a differently looking font n the dot files that doxygen
++# generates you can specify the font name using DOT_FONTNAME. You need to make
++# sure dot is able to find the font, which can be done by putting it in a
++# standard location or by setting the DOTFONTPATH environment variable or by
++# setting DOT_FONTPATH to the directory containing the font.
++# The default value is: Helvetica.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_FONTNAME           = Helvetica
+ 
+-# The DOT_FONTSIZE tag can be used to set the size of the font of dot graphs.
+-# The default size is 10pt.
++# The DOT_FONTSIZE tag can be used to set the size (in points) of the font of
++# dot graphs.
++# Minimum value: 4, maximum value: 24, default value: 10.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_FONTSIZE           = 10
+ 
+-# By default doxygen will tell dot to use the Helvetica font.
+-# If you specify a different font using DOT_FONTNAME you can use DOT_FONTPATH to
+-# set the path where dot can find it.
++# By default doxygen will tell dot to use the default font as specified with
++# DOT_FONTNAME. If you specify a different font using DOT_FONTNAME you can set
++# the path where dot can find it using this tag.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_FONTPATH           =
+ 
+-# If the CLASS_GRAPH and HAVE_DOT tags are set to YES then doxygen
+-# will generate a graph for each documented class showing the direct and
+-# indirect inheritance relations. Setting this tag to YES will force the
+-# the CLASS_DIAGRAMS tag to NO.
++# If the CLASS_GRAPH tag is set to YES then doxygen will generate a graph for
++# each documented class showing the direct and indirect inheritance relations.
++# Setting this tag to YES will force the CLASS_DIAGRAMS tag to NO.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ CLASS_GRAPH            = YES
+ 
+-# If the COLLABORATION_GRAPH and HAVE_DOT tags are set to YES then doxygen
+-# will generate a graph for each documented class showing the direct and
+-# indirect implementation dependencies (inheritance, containment, and
+-# class references variables) of the class with other documented classes.
++# If the COLLABORATION_GRAPH tag is set to YES then doxygen will generate a
++# graph for each documented class showing the direct and indirect implementation
++# dependencies (inheritance, containment, and class references variables) of the
++# class with other documented classes.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ COLLABORATION_GRAPH    = YES
+ 
+-# If the GROUP_GRAPHS and HAVE_DOT tags are set to YES then doxygen
+-# will generate a graph for groups, showing the direct groups dependencies
++# If the GROUP_GRAPHS tag is set to YES then doxygen will generate a graph for
++# groups, showing the direct groups dependencies.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ GROUP_GRAPHS           = YES
+ 
+ # If the UML_LOOK tag is set to YES doxygen will generate inheritance and
+ # collaboration diagrams in a style similar to the OMG's Unified Modeling
+ # Language.
++# The default value is: NO.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ UML_LOOK               = NO
+ 
+-# If set to YES, the inheritance and collaboration graphs will show the
+-# relations between templates and their instances.
++# If the UML_LOOK tag is enabled, the fields and methods are shown inside the
++# class node. If there are many fields or methods and many nodes the graph may
++# become too big to be useful. The UML_LIMIT_NUM_FIELDS threshold limits the
++# number of items for each type to make the size more manageable. Set this to 0
++# for no limit. Note that the threshold may be exceeded by 50% before the limit
++# is enforced. So when you set the threshold to 10, up to 15 fields may appear,
++# but if the number exceeds 15, the total amount of fields shown is limited to
++# 10.
++# Minimum value: 0, maximum value: 100, default value: 10.
++# This tag requires that the tag HAVE_DOT is set to YES.
++
++UML_LIMIT_NUM_FIELDS   = 10
++
++# If the TEMPLATE_RELATIONS tag is set to YES then the inheritance and
++# collaboration graphs will show the relations between templates and their
++# instances.
++# The default value is: NO.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ TEMPLATE_RELATIONS     = NO
+ 
+-# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDE_GRAPH, and HAVE_DOT
+-# tags are set to YES then doxygen will generate a graph for each documented
+-# file showing the direct and indirect include dependencies of the file with
+-# other documented files.
++# If the INCLUDE_GRAPH, ENABLE_PREPROCESSING and SEARCH_INCLUDES tags are set to
++# YES then doxygen will generate a graph for each documented file showing the
++# direct and indirect include dependencies of the file with other documented
++# files.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ INCLUDE_GRAPH          = YES
+ 
+-# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDED_BY_GRAPH, and
+-# HAVE_DOT tags are set to YES then doxygen will generate a graph for each
+-# documented header file showing the documented files that directly or
+-# indirectly include this file.
++# If the INCLUDED_BY_GRAPH, ENABLE_PREPROCESSING and SEARCH_INCLUDES tags are
++# set to YES then doxygen will generate a graph for each documented file showing
++# the direct and indirect include dependencies of the file with other documented
++# files.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ INCLUDED_BY_GRAPH      = YES
+ 
+-# If the CALL_GRAPH and HAVE_DOT options are set to YES then
+-# doxygen will generate a call dependency graph for every global function
+-# or class method. Note that enabling this option will significantly increase
+-# the time of a run. So in most cases it will be better to enable call graphs
+-# for selected functions only using the \callgraph command.
++# If the CALL_GRAPH tag is set to YES then doxygen will generate a call
++# dependency graph for every global function or class method.
++#
++# Note that enabling this option will significantly increase the time of a run.
++# So in most cases it will be better to enable call graphs for selected
++# functions only using the \callgraph command.
++# The default value is: NO.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ CALL_GRAPH             = NO
+ 
+-# If the CALLER_GRAPH and HAVE_DOT tags are set to YES then
+-# doxygen will generate a caller dependency graph for every global function
+-# or class method. Note that enabling this option will significantly increase
+-# the time of a run. So in most cases it will be better to enable caller
+-# graphs for selected functions only using the \callergraph command.
++# If the CALLER_GRAPH tag is set to YES then doxygen will generate a caller
++# dependency graph for every global function or class method.
++#
++# Note that enabling this option will significantly increase the time of a run.
++# So in most cases it will be better to enable caller graphs for selected
++# functions only using the \callergraph command.
++# The default value is: NO.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ CALLER_GRAPH           = NO
+ 
+-# If the GRAPHICAL_HIERARCHY and HAVE_DOT tags are set to YES then doxygen
+-# will generate a graphical hierarchy of all classes instead of a textual one.
++# If the GRAPHICAL_HIERARCHY tag is set to YES then doxygen will graphical
++# hierarchy of all classes instead of a textual one.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ GRAPHICAL_HIERARCHY    = YES
+ 
+-# If the DIRECTORY_GRAPH, SHOW_DIRECTORIES and HAVE_DOT tags are set to YES
+-# then doxygen will show the dependencies a directory has on other directories
+-# in a graphical way. The dependency relations are determined by the #include
+-# relations between the files in the directories.
++# If the DIRECTORY_GRAPH tag is set to YES then doxygen will show the
++# dependencies a directory has on other directories in a graphical way. The
++# dependency relations are determined by the #include relations between the
++# files in the directories.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DIRECTORY_GRAPH        = YES
+ 
+ # The DOT_IMAGE_FORMAT tag can be used to set the image format of the images
+-# generated by dot. Possible values are svg, png, jpg, or gif.
+-# If left blank png will be used. If you choose svg you need to set
+-# HTML_FILE_EXTENSION to xhtml in order to make the SVG files
+-# visible in IE 9+ (other browsers do not have this requirement).
++# generated by dot.
++# Note: If you choose svg you need to set HTML_FILE_EXTENSION to xhtml in order
++# to make the SVG files visible in IE 9+ (other browsers do not have this
++# requirement).
++# Possible values are: png, jpg, gif and svg.
++# The default value is: png.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_IMAGE_FORMAT       = png
+ 
+ # If DOT_IMAGE_FORMAT is set to svg, then this option can be set to YES to
+ # enable generation of interactive SVG images that allow zooming and panning.
+-# Note that this requires a modern browser other than Internet Explorer.
+-# Tested and working are Firefox, Chrome, Safari, and Opera. For IE 9+ you
+-# need to set HTML_FILE_EXTENSION to xhtml in order to make the SVG files
+-# visible. Older versions of IE do not have SVG support.
++#
++# Note that this requires a modern browser other than Internet Explorer. Tested
++# and working are Firefox, Chrome, Safari, and Opera.
++# Note: For IE 9+ you need to set HTML_FILE_EXTENSION to xhtml in order to make
++# the SVG files visible. Older versions of IE do not have SVG support.
++# The default value is: NO.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ INTERACTIVE_SVG        = NO
+ 
+-# The tag DOT_PATH can be used to specify the path where the dot tool can be
++# The DOT_PATH tag can be used to specify the path where the dot tool can be
+ # found. If left blank, it is assumed the dot tool can be found in the path.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_PATH               = $(DOT_PATH)
+ 
+ # The DOTFILE_DIRS tag can be used to specify one or more directories that
+-# contain dot files that are included in the documentation (see the
+-# \dotfile command).
++# contain dot files that are included in the documentation (see the \dotfile
++# command).
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOTFILE_DIRS           =
+ 
+ # The MSCFILE_DIRS tag can be used to specify one or more directories that
+-# contain msc files that are included in the documentation (see the
+-# \mscfile command).
++# contain msc files that are included in the documentation (see the \mscfile
++# command).
+ 
+ MSCFILE_DIRS           =
+ 
+-# The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of
+-# nodes that will be shown in the graph. If the number of nodes in a graph
+-# becomes larger than this value, doxygen will truncate the graph, which is
+-# visualized by representing a node as a red box. Note that doxygen if the
+-# number of direct children of the root node in a graph is already larger than
+-# DOT_GRAPH_MAX_NODES then the graph will not be shown at all. Also note
+-# that the size of a graph can be further restricted by MAX_DOT_GRAPH_DEPTH.
++# The DOT_GRAPH_MAX_NODES tag can be used to set the maximum number of nodes
++# that will be shown in the graph. If the number of nodes in a graph becomes
++# larger than this value, doxygen will truncate the graph, which is visualized
++# by representing a node as a red box. Note that doxygen if the number of direct
++# children of the root node in a graph is already larger than
++# DOT_GRAPH_MAX_NODES then the graph will not be shown at all. Also note that
++# the size of a graph can be further restricted by MAX_DOT_GRAPH_DEPTH.
++# Minimum value: 0, maximum value: 10000, default value: 50.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_GRAPH_MAX_NODES    = 50
+ 
+-# The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the
+-# graphs generated by dot. A depth value of 3 means that only nodes reachable
+-# from the root by following a path via at most 3 edges will be shown. Nodes
+-# that lay further from the root node will be omitted. Note that setting this
+-# option to 1 or 2 may greatly reduce the computation time needed for large
+-# code bases. Also note that the size of a graph can be further restricted by
++# The MAX_DOT_GRAPH_DEPTH tag can be used to set the maximum depth of the graphs
++# generated by dot. A depth value of 3 means that only nodes reachable from the
++# root by following a path via at most 3 edges will be shown. Nodes that lay
++# further from the root node will be omitted. Note that setting this option to 1
++# or 2 may greatly reduce the computation time needed for large code bases. Also
++# note that the size of a graph can be further restricted by
+ # DOT_GRAPH_MAX_NODES. Using a depth of 0 means no depth restriction.
++# Minimum value: 0, maximum value: 1000, default value: 0.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ MAX_DOT_GRAPH_DEPTH    = 0
+ 
+ # Set the DOT_TRANSPARENT tag to YES to generate images with a transparent
+-# background. This is disabled by default, because dot on Windows does not
+-# seem to support this out of the box. Warning: Depending on the platform used,
+-# enabling this option may lead to badly anti-aliased labels on the edges of
+-# a graph (i.e. they become hard to read).
++# background. This is disabled by default, because dot on Windows does not seem
++# to support this out of the box.
++#
++# Warning: Depending on the platform used, enabling this option may lead to
++# badly anti-aliased labels on the edges of a graph (i.e. they become hard to
++# read).
++# The default value is: NO.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_TRANSPARENT        = NO
+ 
+ # Set the DOT_MULTI_TARGETS tag to YES allow dot to generate multiple output
+ # files in one run (i.e. multiple -o and -T options on the command line). This
+-# makes dot run faster, but since only newer versions of dot (>1.8.10)
+-# support this, this feature is disabled by default.
++# makes dot run faster, but since only newer versions of dot (>1.8.10) support
++# this, this feature is disabled by default.
++# The default value is: NO.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_MULTI_TARGETS      = NO
+ 
+-# If the GENERATE_LEGEND tag is set to YES (the default) Doxygen will
+-# generate a legend page explaining the meaning of the various boxes and
+-# arrows in the dot generated graphs.
++# If the GENERATE_LEGEND tag is set to YES doxygen will generate a legend page
++# explaining the meaning of the various boxes and arrows in the dot generated
++# graphs.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ GENERATE_LEGEND        = YES
+ 
+-# If the DOT_CLEANUP tag is set to YES (the default) Doxygen will
+-# remove the intermediate dot files that are used to generate
+-# the various graphs.
++# If the DOT_CLEANUP tag is set to YES doxygen will remove the intermediate dot
++# files that are used to generate the various graphs.
++# The default value is: YES.
++# This tag requires that the tag HAVE_DOT is set to YES.
+ 
+ DOT_CLEANUP            = YES

Modified: trunk/packages/libhmsbeagle/trunk/debian/patches/series
===================================================================
--- trunk/packages/libhmsbeagle/trunk/debian/patches/series	2014-09-30 19:43:11 UTC (rev 18175)
+++ trunk/packages/libhmsbeagle/trunk/debian/patches/series	2014-10-01 09:37:15 UTC (rev 18176)
@@ -1,3 +1,4 @@
 enable_static.patch
 # disable_cpu_sse_plugin.patch
 gcc-4.7.patch
+doxygen_update.patch




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