[med-svn] [fastaq] 01/01: Using sanger pathogen git repo as upstream
Jorge Soares
jssoares-guest at moszumanska.debian.org
Fri Oct 10 10:40:02 UTC 2014
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jssoares-guest pushed a commit to branch master
in repository fastaq.
commit 477a64be42c68803fcefa7c5345e6d390d33809f
Author: Jorge Soares <j.s.soares at gmail.com>
Date: Fri Oct 10 11:39:54 2014 +0100
Using sanger pathogen git repo as upstream
---
debian/control | 8 ++++----
debian/rules | 2 +-
debian/watch | 2 +-
setup.py | 4 ++--
4 files changed, 8 insertions(+), 8 deletions(-)
diff --git a/debian/control b/debian/control
index 7426ebc..34aeb10 100644
--- a/debian/control
+++ b/debian/control
@@ -10,18 +10,18 @@ Build-Depends: debhelper (>= 9),
python3-nose
Standards-Version: 3.9.5
Vcs-Browser: http://anonscm.debian.org/gitweb/?p=debian-med/fastaq.git
-Vcs-Svn: git://anonscm.debian.org/debian-med/fastaq.git
Homepage: https://github.com/js21/fastaq
Package: fastaq
Architecture: any
-Depends: ${shlibs:Depends},
+Depends: ${python3:Depends},
${misc:Depends},
-Description: Python3 scripts to manipulate FASTA and FASTQ files, plus API for developers
+Description: FASTA and FASTQ file manipulation, plus API for developers
+ .
All scripts automatically detect whether the input is a FASTA or FASTQ file.
.
Input and output files can be gzipped. An input file is assumed to be gzipped if its name ends with .gz. To gzip an output file, just name it with .gz at the end.
.
You can use a minus sign for a filename to use stdin or stdout, so scripts can be piped together.
.
- A developper API is also provided by this package. There are plenty of examples in tasks.py
\ No newline at end of file
+ A developer API is also provided by this package. There are plenty of examples in tasks.py
\ No newline at end of file
diff --git a/debian/rules b/debian/rules
index a1a768e..e3a716e 100755
--- a/debian/rules
+++ b/debian/rules
@@ -7,7 +7,7 @@ export PYBUILD_NAME=fastaq
dh $@ --with python3 --buildsystem=pybuild
override_dh_auto_build:
-
+ dh_python3
dh_auto_build
mkdir $(CURDIR)/doc
cd $(CURDIR)/doc
diff --git a/debian/watch b/debian/watch
index 551fe1b..1140c71 100644
--- a/debian/watch
+++ b/debian/watch
@@ -1,3 +1,3 @@
version=3
-https://github.com/js21/fastaq/releases .*/archive/(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
+https://github.com/sanger-pathogens/fastaq/releases .*/archive/(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)
diff --git a/setup.py b/setup.py
index 6e7ea36..3064862 100644
--- a/setup.py
+++ b/setup.py
@@ -6,14 +6,14 @@ def read(fname):
return open(os.path.join(os.path.dirname(__file__), fname)).read()
setup(
- name='fastaq',
+ name='Fastaq',
version='1.5.0',
description='Scripts to manipulate FASTA and FASTQ files, plus API for developers',
long_description=read('README.md'),
packages = find_packages(),
author='Martin Hunt',
author_email='mh12 at sanger.ac.uk',
- url='https://github.com/js21/fastaq',
+ url='https://github.com/sanger-pathogens/Fastaq',
scripts=glob.glob('scripts/*'),
test_suite='nose.collector',
install_requires=['nose >= 1.3'],
--
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