[med-svn] r18363 - in trunk/packages/R/r-bioc-genomicalignments/trunk/debian: . tests

[Andreas Tille]

Author: tille
Date: 2014-10-21 04:46:16 +0000 (Tue, 21 Oct 2014)
New Revision: 18363

Modified:
   trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog
   trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control
   trunk/packages/R/r-bioc-genomicalignments/trunk/debian/tests/control
Log:
New upstream version with changed dependencies



Modified: trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog	2014-10-21 03:34:15 UTC (rev 18362)
+++ trunk/packages/R/r-bioc-genomicalignments/trunk/debian/changelog	2014-10-21 04:46:16 UTC (rev 18363)
@@ -1,3 +1,11 @@
+r-bioc-genomicalignments (1.2.0-1) experimental; urgency=medium
+
+  * New upstrem version
+  * cme fix dpkg-control
+  * Adapt to new dependencies
+
+ -- Andreas Tille <tille at debian.org>  Tue, 21 Oct 2014 06:07:22 +0200
+
 r-bioc-genomicalignments (1.0.6-1) unstable; urgency=medium
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control	2014-10-21 03:34:15 UTC (rev 18362)
+++ trunk/packages/R/r-bioc-genomicalignments/trunk/debian/control	2014-10-21 04:46:16 UTC (rev 18363)
@@ -2,19 +2,14 @@
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>
 Section: gnu-r
+Testsuite: autopkgtest
 Priority: optional
-XS-Testsuite: autopkgtest
 Build-Depends: debhelper (>= 9),
                cdbs,
                r-base-dev,
-               r-bioc-biocgenerics,
-               r-bioc-iranges,
-               r-bioc-genomicranges,
-               r-bioc-biostrings,
-               r-bioc-rsamtools (>= 1.15.26),
-               r-bioc-bsgenome (>= 1.31.12),
-               r-bioc-biocparallel
-Standards-Version: 3.9.5
+               r-bioc-rsamtools (>= 1.18.0),
+               r-bioc-biocparallel (>= 1.0.0)
+Standards-Version: 3.9.6
 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-genomicalignments/trunk/
 Homepage: http://bioconductor.org/packages/release/bioc/html/GenomicAlignments.html
@@ -24,13 +19,8 @@
 Depends: ${R:Depends},
          ${misc:Depends},
          ${shlibs:Depends},
-         r-bioc-biocgenerics,
-         r-bioc-iranges,
-         r-bioc-genomicranges,
-         r-bioc-biostrings,
-         r-bioc-rsamtools (>= 1.15.26),
-         r-bioc-bsgenome (>= 1.31.12),
-         r-bioc-biocparallel
+         r-bioc-rsamtools (>= 1.18.0),
+         r-bioc-biocparallel (>= 1.0.0)
 Recommends: r-bioc-shortread
 Description: BioConductor representation and manipulation of short genomic alignments
  This BioConductor package provides efficient containers for storing and

Modified: trunk/packages/R/r-bioc-genomicalignments/trunk/debian/tests/control
===================================================================
--- trunk/packages/R/r-bioc-genomicalignments/trunk/debian/tests/control	2014-10-21 03:34:15 UTC (rev 18362)
+++ trunk/packages/R/r-bioc-genomicalignments/trunk/debian/tests/control	2014-10-21 04:46:16 UTC (rev 18363)
@@ -1,3 +1,3 @@
 Tests: run-unit-test
-Depends: @, r-cran-runit, r-bioc-shortread
+Depends: @, r-cran-runit, r-bioc-shortread (>= 1.24.0)
 Restrictions: allow-stderr