[med-svn] r18398 - trunk/packages/circos/trunk/debian/patches

[Andreas Tille]

Author: tille
Date: 2014-10-25 07:06:00 +0000 (Sat, 25 Oct 2014)
New Revision: 18398

Modified:
   trunk/packages/circos/trunk/debian/patches/fix_examples
Log:
Adapt patch to new upstream example


Modified: trunk/packages/circos/trunk/debian/patches/fix_examples
===================================================================
--- trunk/packages/circos/trunk/debian/patches/fix_examples	2014-10-25 06:51:14 UTC (rev 18397)
+++ trunk/packages/circos/trunk/debian/patches/fix_examples	2014-10-25 07:06:00 UTC (rev 18398)
@@ -6,9 +6,18 @@
 Author: Olivier Sallou <osallou at debian.org>
 Last-Updated: 2012-09-21
 Forwarded: not-needed
+--- a/example/run
++++ b/example/run
+@@ -4,5 +4,5 @@ echo "Creating image circos.png and writ
+ 
+ echo "Example takes ~45-60 seconds to generate."
+ 
+-../bin/circos -conf etc/circos.conf -debug_group summary,timer > run.out
++circos -conf etc/circos.conf -debug_group summary,timer > run.out
+ 
 --- a/example/etc/circos.conf
 +++ b/example/etc/circos.conf
-@@ -248,16 +248,16 @@
+@@ -248,16 +248,16 @@ orientation = in
  <<include ticks.conf>>
  
  <image>
@@ -28,14 +37,6 @@
  # system and debug settings
 -<<include etc/housekeeping.conf>>
 +<<include housekeeping.conf>>
+ data_out_of_range* = trim
  
- anti_aliasing* = no
- 
---- a/example/run
-+++ b/example/run
-@@ -1,4 +1,4 @@
- #!/bin/bash
- 
--../bin/circos -conf etc/circos.conf -debug_group summary,timer > run.out
-+circos -conf etc/circos.conf -debug_group summary,timer > run.out
- 
+ # If you experience strange artefacts in the image (spurious squares),