[med-svn] [gmap] 02/03: Merge tag 'upstream/2014-10-22'

[Andreas Tille]

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tille pushed a commit to branch master
in repository gmap.

commit 71d688163e603e16543f513910f4b78e2ae9f258
Merge: 29e7cb2 11ae4ff
Author: Andreas Tille <tille at debian.org>
Date:   Sun Oct 26 08:20:32 2014 +0100

    Merge tag 'upstream/2014-10-22'
    
    Upstream version 2014-10-22

 ChangeLog             |  33 ++++++++++
 VERSION               |   2 +-
 configure             |  24 ++++----
 src/bitpack64-write.c |  20 +++---
 src/genome128_hr.c    |   6 +-
 src/gregion.c         | 167 ++++++++++++++++++++++++++++++++++++++++----------
 src/indexdb-write.c   |   3 +-
 src/sarray-read.c     |  31 +++++++---
 src/sarray-write.c    |   3 +-
 src/shortread.c       |  92 +++++++++++++++------------
 src/stage1hr.c        |   3 +-
 src/stage2.c          | 134 +++++++++++++++++++---------------------
 src/stage3hr.c        |  57 ++++++++++++++---
 13 files changed, 383 insertions(+), 192 deletions(-)

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