[med-svn] r17985 - in trunk/packages/R: . r-bioc-biocgenerics r-bioc-biocgenerics/trunk r-bioc-biocgenerics/trunk/debian r-bioc-biocgenerics/trunk/debian/source

Thu Sep 11 08:49:50 UTC 2014

Author: moeller
Date: 2014-09-11 08:49:48 +0000 (Thu, 11 Sep 2014)
New Revision: 17985

Added:
   trunk/packages/R/r-bioc-biocgenerics/
   trunk/packages/R/r-bioc-biocgenerics/trunk/
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/README.test
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/changelog
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/compat
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/control
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/copyright
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/docs
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/rules
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/source/
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/source/format
   trunk/packages/R/r-bioc-biocgenerics/trunk/debian/watch
Log:
Another reverse dependency for EBImage.



Property changes on: trunk/packages/R/r-bioc-biocgenerics/trunk/debian
___________________________________________________________________
Added: mergeWithUpstream
   + 1

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/README.test
===================================================================

--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/README.test	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/README.test	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1,5 @@
+Notes on how this package can be tested.
+========================================
+
+This package can be tested by loading it into R with the command
+'library(BiocGenerics)' in order to confirm its integrity.

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/changelog	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/changelog	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1,5 @@
+r-bioc-biocgenerics (0.10.0-1) UNRELEASED; urgency=low
+
+  * Initial release.
+
+ -- Steffen Moeller <moeller at debian.org>  Thu, 11 Sep 2014 10:23:38 +0200

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/compat
===================================================================
--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/compat	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/compat	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1 @@
+9

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/control	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/control	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1,20 @@
+Source: r-bioc-biocgenerics
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Steffen Moeller <moeller at debian.org>
+Section: gnu-r
+Priority: optional
+Build-Depends: debhelper (>= 9),
+               cdbs,
+               r-base-dev (>= 3.0)
+Standards-Version: 3.9.5
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-ebimage/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-ebimage/trunk/
+Homepage: http://www.bioconductor.org/packages/release/bioc/html/ebimage.html
+
+Package: r-bioc-biocgenerics
+Architecture: all
+Depends: ${R:Depends},
+         ${shlib:Depends}
+Description: GNU R generic functions for Bioconductor
+ The package comprises S4 generic functions needed
+ by many Bioconductor packages.

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/copyright	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1,30 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: BiocGenerics
+Upstream-Contact: Bioconductor Package Maintainer <maintainer at bioconductor.org>
+Source: http://www.bioconductor.org/packages/release/bioc/html/BiocGenerics.html
+
+Files: *
+Copyright: © 2006-20124AGThe Bioconductor Dev Team <maintainer at bioconductor.org>
+License: LGPL
+
+Files: debian/*
+Copyright: 2008-2009 Steffen Moeller <moeller at debian.org>
+License: LGPL
+
+License: LGPL
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU Lesser General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ . 
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU Lesser General Public License
+ along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ .
+ On a Debian GNU/Linux system, the GNU Lesser GPL license version 3 is included
+ in the file ‘/usr/share/common-licenses/LGPL’.
+

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/docs
===================================================================
--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/docs	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/docs	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1 @@
+debian/README.test

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/rules	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/rules	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1,12 @@
+#!/usr/bin/make -f
+
+export DEB_BUILD_HARDENING=1
+export DEB_BUILD_MAINT_OPTIONS = hardening=+all
+debRreposname=bioc
+include /usr/share/R/debian/r-cran.mk
+
+clean::
+	find . -name "*.pdf" -o -name "*.tex" -o -name "*-eps" -o -name "*.log" -o -name "*.ps" -o -name "*.txt" | xargs -r chmod -x
+
+get-orig-source:
+	uscan --verbose --force-download --repack --compression xz


Property changes on: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/source/format
===================================================================
--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/source/format	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/source/format	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1 @@
+3.0 (quilt)

Added: trunk/packages/R/r-bioc-biocgenerics/trunk/debian/watch
===================================================================
--- trunk/packages/R/r-bioc-biocgenerics/trunk/debian/watch	                        (rev 0)
+++ trunk/packages/R/r-bioc-biocgenerics/trunk/debian/watch	2014-09-11 08:49:48 UTC (rev 17985)
@@ -0,0 +1,4 @@
+version=3
+opts=downloadurlmangle=s/\.\./packages\/release\/bioc/ \
+ http://www.bioconductor.org/packages/release/bioc/html/BiocGenerics.html \
+ .*/BiocGenerics_([\d\.]+)\.tar\.gz


