[med-svn] [king-probe] 02/06: Add Debian Dir

Mon Aug 10 05:51:14 UTC 2015

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mali-guest pushed a commit to branch master
in repository king-probe.

commit 1ffd9538a57e4a1c9b337b366b1a43ebf31eb757
Author: Malihe Asemani <ml.asemani at gmail.com>
Date:   Fri Aug 7 20:11:12 2015 +0000

    Add Debian Dir
---
 .gitignore           |  2 ++
 debian/changelog     |  5 +++++
 debian/compat        |  1 +
 debian/control       | 26 ++++++++++++++++++++++++++
 debian/copyright     | 19 +++++++++++++++++++
 debian/install       |  1 +
 debian/manpages      |  1 +
 debian/rules         | 23 +++++++++++++++++++++++
 debian/source/format |  1 +
 debian/watch         |  6 ++++++
 10 files changed, 85 insertions(+)

diff --git a/.gitignore b/.gitignore
new file mode 100644
index 0000000..1bb097f
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,2 @@
+*~
+*.o
\ No newline at end of file
diff --git a/debian/changelog b/debian/changelog
new file mode 100644
index 0000000..336839c
--- /dev/null
+++ b/debian/changelog
@@ -0,0 +1,5 @@
+probe (2.13.110909-1) unstable; urgency=low
+
+  * Initial release. (Closes: #XXXXXX)
+
+ -- Malihe Asemani <ml.asemani at gmail.com>  Fri, 07 Aug 2015 14:29:12 +0000
diff --git a/debian/compat b/debian/compat
new file mode 100644
index 0000000..ec63514
--- /dev/null
+++ b/debian/compat
@@ -0,0 +1 @@
+9
diff --git a/debian/control b/debian/control
new file mode 100644
index 0000000..92e3440
--- /dev/null
+++ b/debian/control
@@ -0,0 +1,26 @@
+Source: probe
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Malihe Asemani <ml.asemani at gmial.com>,
+	   Andreas Tille <tille at debian.org>,
+           Michael Prisant <michael.prisant at gmail.com>
+Build-Depends: debhelper (>= 9)
+Standards-Version: 3.9.6
+Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/probe.git
+Vcs-Git: git://anonscm.debian.org/debian-med/probe.git
+Homepage: http://kinemage.biochem.duke.edu/software/probe.php
+
+Package: probe
+Architecture: any
+Depends: ${shlibs:Depends}, ${misc:Depends}
+Description: Evaluate and visualize protein interatomic packing
+ Probe is a program that allows one to evaluate atomic packing, either
+ within or between molecules. It generates "contact dots" where
+ atoms are in close contact.
+ .
+ The program "probe" generates "contact dots" at points on the van der
+ Waals surface of atoms which are in close proximity to other atoms; reading
+ atomic coordinates in protein databank (PDB) format files and writing
+ color-coded dot lists (spikes where atoms clash) for inclusion in a
+ kinemage.
\ No newline at end of file
diff --git a/debian/copyright b/debian/copyright
new file mode 100644
index 0000000..ce76b5b
--- /dev/null
+++ b/debian/copyright
@@ -0,0 +1,19 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: probe
+Source: https://github.com/rlabduke/probe/
+
+Files: *
+Copyright: 2014 David C. Richardson
+License: probe
+
+Files: debian/*
+Copyright: 2015 Malihe Asemani <ml.asemani at gmail.com>, Andreas Tille <tille at debian.org>
+License: probe
+
+License: probe
+ This is free software and the source code is freely
+ available. You are free to redistribute or modify under the
+ conditions that (1) this notice is not removed or modified
+ in any way and (2) any modified versions of the program are
+ also available for free.
+               ** Absolutely no Warranty **
diff --git a/debian/install b/debian/install
new file mode 100644
index 0000000..d9ed25b
--- /dev/null
+++ b/debian/install
@@ -0,0 +1 @@
+probe	usr/bin
diff --git a/debian/manpages b/debian/manpages
new file mode 100644
index 0000000..0f65186
--- /dev/null
+++ b/debian/manpages
@@ -0,0 +1 @@
+debian/*.1
diff --git a/debian/rules b/debian/rules
new file mode 100755
index 0000000..f7474ad
--- /dev/null
+++ b/debian/rules
@@ -0,0 +1,23 @@
+#!/usr/bin/make -f
+
+# DH_VERBOSE := 1
+
+# some helpful variables - uncomment them if needed
+# shamelessly stolen from http://jmtd.net/log/awk/
+#DEBVERS        := $(shell dpkg-parsechangelog | awk '/^Version:/ {print $$2}')
+#VERSION        := $(shell echo '$(DEBVERS)' | sed -e 's/^[0-9]*://' -e 's/-.*//')
+#DEBFLAVOR      := $(shell dpkg-parsechangelog | awk '/^Distribution:/ {print $$2}')
+#DEBPKGNAME     := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}')
+#DEBIAN_BRANCH  := $(shell awk 'BEGIN{FS="[= ]+"} /debian-branch/ {print $$2}' debian/gbp.conf)
+#GIT_TAG        := $(subst ~,_,$(VERSION))
+
+# alternatively to manually set those variables you can
+#  include /usr/share/cdbs/1/rules/buildvars.mk
+# and use what is set there.  Any hint whether dh might set variables in
+# a similar manner are welcome.
+
+%:
+	dh $@
+
+override_dh_auto_build:
+	dh_auto_build --buildsystem=makefile -- -f Makefile.linux probe
diff --git a/debian/source/format b/debian/source/format
new file mode 100644
index 0000000..163aaf8
--- /dev/null
+++ b/debian/source/format
@@ -0,0 +1 @@
+3.0 (quilt)
diff --git a/debian/watch b/debian/watch
new file mode 100644
index 0000000..5f2b6d2
--- /dev/null
+++ b/debian/watch
@@ -0,0 +1,6 @@
+version=3
+
+http://kinemage.biochem.duke.edu/software/probe.php .*/downloads/software/probe/probe.([\d.]+)\.src\.(tgz|zip)
+
+# if there would be release tags ...
+# https://github.com/rlabduke/probe/releases .*/archive/#PREFIX#(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz)

-- 
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