[med-svn] [iva] 03/03: cme fix dpkg

Sascha Steinbiss sascha-guest at moszumanska.debian.org
Mon Aug 24 22:40:55 UTC 2015


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sascha-guest pushed a commit to branch master
in repository iva.

commit 32b133569a4037cbed2e516ea77af3b370dbd234
Author: Sascha Steinbiss <sascha at steinbiss.name>
Date:   Mon Aug 24 22:39:10 2015 +0000

    cme fix dpkg
---
 debian/control                                    | 49 ++++++++++++++---------
 debian/patches/add-shebang-line-to-getMummerStats |  2 +-
 2 files changed, 31 insertions(+), 20 deletions(-)

diff --git a/debian/control b/debian/control
index 99c92d0..4a64080 100644
--- a/debian/control
+++ b/debian/control
@@ -1,34 +1,45 @@
 Source: iva
-Section: science
-Priority: optional
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>,
            Jorge Soares <j.s.soares at gmail.com>,
            Sascha Steinbiss <sascha at steinbiss.name>
+Section: science
+Priority: optional
 Build-Depends: debhelper (>= 9),
-	       libssl-dev,
-	       bioperl,
-	       fastaq (>= 1.6),
-	       kmc (>= 2.0),
-	       help2man,
-	       mummer,
-	       python3,
-           python3-setuptools,
-           python3-numpy,
-           python3-nose,
-	       python3-networkx,
-	       python3-pysam,
-	       samtools,
-	       smalt,
-	       trimmomatic
+               libssl-dev,
+               bioperl,
+               fastaq (>= 1.6),
+               kmc,
+               help2man,
+               mummer,
+               python3,
+               python3-setuptools,
+               python3-numpy,
+               python3-nose,
+               python3-networkx,
+               python3-pysam,
+               samtools,
+               smalt,
+               trimmomatic
 Standards-Version: 3.9.6
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/iva.git
 Homepage: https://github.com/sanger-pathogens/iva
 
 Package: iva
 Architecture: any
-Depends: ${misc:Depends}, ${python3:Depends}, fastaq (>= 1.6), kmc (>= 2.0), mummer, smalt, samtools, python3-numpy, python3-networkx, python3-pysam
-Recommends: r-core, bioperl, trimmomatic
+Depends: ${misc:Depends},
+         ${python3:Depends},
+         fastaq (>= 1.6),
+         kmc,
+         mummer,
+         smalt,
+         samtools,
+         python3-numpy,
+         python3-networkx,
+         python3-pysam
+Recommends: r-core,
+            bioperl,
+            trimmomatic
 Description: iterative virus assembler
  IVA is a de novo assembler designed to assemble
  virus genomes that have no repeat sequences,
diff --git a/debian/patches/add-shebang-line-to-getMummerStats b/debian/patches/add-shebang-line-to-getMummerStats
index 53499e5..d2f226c 100644
--- a/debian/patches/add-shebang-line-to-getMummerStats
+++ b/debian/patches/add-shebang-line-to-getMummerStats
@@ -1,4 +1,4 @@
-Descripiton: Adds the shebang line
+Description: Add shebang line to getMummerStats
 Author: Jorge Soares <j.s.soares at gmail.com>
 Last-Update: 2014-12-08
 --- a/iva/gage/getMummerStats.sh

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