[med-svn] [phyml] annotated tag upstream/20120412 created (now 9aa6598)

[Andreas Tille]

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tille pushed a change to annotated tag upstream/20120412
in repository phyml.

        at  9aa6598   (tag)
   tagging  21fa491dd2581be4f4ff5f2c338c9a43a0cd937c (commit)
 tagged by  Andreas Tille
        on  Thu Aug 27 16:24:09 2015 +0200

- Log -----------------------------------------------------------------
Upstream version 20120412

Andreas Tille (20):
      Fixed watch file which enables retrieving new upstream version, source version 3.0
      Uploaded new upstream including newly written manpage
      cme fix dpkg-control (but kept "Enhances: bioperl-run" which was deleted by cme)
      Debhelper 9
      Use dh more consequently to work around two different configure steps
      use anonscm in Vcs fields
      Propagate hardening options
      Newer publication
      Manpage for phytime
      Mention phyml-mpi in README.Debian and upload to unstable
      Use -msse only on i386 and amd64
      Source is now on Github
      Fix typo in long description
      Upstream confirmed that the development version should be fairly stable and most probably suitable for Debian
      cme fix dpkg-control
      New download location at Github
      Remove executable binary from archive (as well as LaTeX remainings once we are starting to remove files)
      Work around the removal of doc in distclean target
      Cleaning cleans a lot of files - make build better reproducible by removing automake files in the first place
      Imported Upstream version 20120412

Charles Plessy (21):
      Creating trunk directory
      [svn-inject] Applying Debian modifications to trunk
      Reuploaded a new upstream release to the non-free section.
      New upstream release with the sources of the documentation in.
      New upstream release, plus package polishing.
      New upstream release and misc. packaging updates.
      Disabled parallel building, that was incorrectly supported and induced build failures by race condidtion (Closes: #536967).
      New upstream release, plus package updates.
      New upstream release, with embedded fonts in the PostScript documentation.
      VCS, Debhelper, Standards-Version, and Enhances: bioperl-run for its wrapper.
      Corrected typo.
      Added build-arch and build-indep targets.
      Incorporated PhyTime and uploaded.
      Do not compress PDFs.
      Keept the manual's old name (without the date).
      New upstream release with no new copyright nor license; normalised and corrected file with config-edit.
      Uploaded phyml_20110919-1_amd64.changes to unstable.
      Renamed debian/upstream-metadata.yaml to debian/upstream.
      Updated watch file to track stable versions only.
      New upstream version, no new copyright nor changelog; adjustments for doc file.
      Forwarded patch to guindon at lirmm.fr.

James McCoy (1):
      Move debian/upstream to debian/upstream/metadata

Nelson A. de Oliveira (3):
      Fix watch file.
      s/Debian-Med/Debian Med
      Fix .desktop files

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