[med-svn] [rsem] branch master updated (694bf54 -> e91aa59)

[Michael Crusoe]

This is an automated email from the git hooks/post-receive script.

misterc-guest pushed a change to branch master
in repository rsem.

      from  694bf54   Use unique maintainer address
       new  e91aa59   some manpages; suggest r-bioc-ebseq, pass in CXXFLAGS, CPPFLAGS, and LDFLAGS

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 debian/changelog                      |   2 +-
 debian/control                        |   1 +
 debian/convert-sam-for-rsem.1         | 177 +++++++++++
 debian/patches/fix-boost              |   2 +
 debian/patches/fix-sam-includes       |   2 +
 debian/patches/ignore-sam             |   2 +
 debian/patches/series                 |   1 +
 debian/patches/use-flags              | 119 +++++++
 debian/rsem-calculate-expression.1    | 571 ++++++++++++++++++++++++++++++++++
 debian/rsem-control-fdr.1             | 177 +++++++++++
 debian/rsem-generate-ngvector.1       | 193 ++++++++++++
 debian/rsem-plot-transcript-wiggles.1 | 199 ++++++++++++
 debian/rsem-prepare-reference.1       | 274 ++++++++++++++++
 debian/rsem-run-ebseq.1               | 199 ++++++++++++
 debian/rsem.manpages                  |   1 +
 debian/rules                          |   2 +-
 16 files changed, 1920 insertions(+), 2 deletions(-)
 create mode 100644 debian/convert-sam-for-rsem.1
 create mode 100644 debian/patches/use-flags
 create mode 100644 debian/rsem-calculate-expression.1
 create mode 100644 debian/rsem-control-fdr.1
 create mode 100644 debian/rsem-generate-ngvector.1
 create mode 100644 debian/rsem-plot-transcript-wiggles.1
 create mode 100644 debian/rsem-prepare-reference.1
 create mode 100644 debian/rsem-run-ebseq.1
 create mode 100644 debian/rsem.manpages

-- 
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