[med-svn] [rsem] branch master updated (e91aa59 -> f90a992)

[Michael Crusoe]

This is an automated email from the git hooks/post-receive script.

misterc-guest pushed a change to branch master
in repository rsem.

      from  e91aa59   some manpages; suggest r-bioc-ebseq, pass in CXXFLAGS, CPPFLAGS, and LDFLAGS
       new  3a9288d   Imported Upstream version 1.2.22+dfsg
       new  7458d1f   Merge tag 'upstream/1.2.22+dfsg'
       new  f90a992   relax boost-dev buildep

The 3 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
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Summary of changes:
 EBSeq/rsem-for-ebseq-find-DE |   7 +-
 PairedEndHit.h               |   4 +-
 PairedEndQModel.h            |   1 +
 README.md                    |  20 +++---
 SamParser.h                  |  23 +++++--
 WHAT_IS_NEW                  |  18 ++++++
 debian/changelog             |   4 +-
 debian/control               |   2 +-
 rsem-calculate-expression    | 150 ++++++++++++++++++++++++++++++++++++++++++-
 rsem-prepare-reference       |  72 +++++++++++++++++++--
 10 files changed, 271 insertions(+), 30 deletions(-)

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