[med-svn] [daligner] 03/09: Fix lintian warnings regarding manpages

[Afif Elghraoui]

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afif-guest pushed a commit to branch master
in repository daligner.

commit c67273c5fe427803ced46320edaaee4072ee4a7f
Author: Afif Elghraoui <afif at ghraoui.name>
Date:   Sat Aug 29 12:51:52 2015 -0700

    Fix lintian warnings regarding manpages
---
 debian/daligner-doc/HPCdaligner.1.md | 4 ++--
 debian/daligner-doc/HPCmapper.1.md   | 4 ++--
 debian/daligner-doc/LAcat.1.md       | 2 +-
 debian/daligner-doc/LAcheck.1.md     | 2 +-
 debian/daligner-doc/LAmerge.1.md     | 4 ++--
 debian/daligner-doc/LAshow.1.md      | 2 +-
 debian/daligner-doc/LAsort.1.md      | 2 +-
 debian/daligner-doc/LAsplit.1.md     | 2 +-
 debian/daligner-doc/daligner.1.md    | 2 +-
 9 files changed, 12 insertions(+), 12 deletions(-)

diff --git a/debian/daligner-doc/HPCdaligner.1.md b/debian/daligner-doc/HPCdaligner.1.md
index 1b84509..48d2a66 100644
--- a/debian/daligner-doc/HPCdaligner.1.md
+++ b/debian/daligner-doc/HPCdaligner.1.md
@@ -4,7 +4,7 @@
 
 # NAME
 
-HPCdaligner – generate a script to run **daligner**(1)
+HPCdaligner - generate a script to run **daligner**(1)
 
 # SYNOPSIS
 
@@ -22,7 +22,7 @@ blocks of a split database and then externally sorts and merges them using
 **LAsort**(1) and **LAmerge**(1) into a collection of alignment files with
 names *path.#.las* where # ranges from 1 to the number of blocks the database
 is split into. These sorted files if concatenated by say **LAcat**(1)
-would contain all the alignments in sorted order (of a-read, then b-read, ...).
+would contain all the alignments in sorted order (of a-read, then b-read, and so on).
 Moreover, all overlaps for a given a-read are guaranteed to not be split across
 files, so one can run artifact analyzers or error correction on each sorted
 file in parallel.
diff --git a/debian/daligner-doc/HPCmapper.1.md b/debian/daligner-doc/HPCmapper.1.md
index 6f2a7a8..7c8de5d 100644
--- a/debian/daligner-doc/HPCmapper.1.md
+++ b/debian/daligner-doc/HPCmapper.1.md
@@ -4,7 +4,7 @@
 
 # NAME
 
-HPCmapper
+HPCmapper - generate a script to map reads
 
 # SYNOPSIS
 
@@ -20,7 +20,7 @@ HPCmapper
 consists of a sequence of commands that effectively "maps" every read in
 the DB *reads* against a reference set of sequences in the DB *ref*,
 recording all the found local alignments in the sequence of files
-*ref.reads.1.las*, *ref.reads.2.las*, ... where *ref.reads.k.las*
+*ref.reads.1.las*, *ref.reads.2.las*, and so on, where *ref.reads.k.las*
 contains the alignments between all of *ref* and the k'th block of
 *reads*.  The parameters are exactly the same as for **HPCdaligner**(1)
 save that the **-k**, **-h**, and **-e** defaults are set
diff --git a/debian/daligner-doc/LAcat.1.md b/debian/daligner-doc/LAcat.1.md
index de24fb1..8e1f472 100644
--- a/debian/daligner-doc/LAcat.1.md
+++ b/debian/daligner-doc/LAcat.1.md
@@ -4,7 +4,7 @@
 
 # NAME
 
-LAcat – concatenate .las files
+LAcat - concatenate .las files
 
 # SYNOPSIS
 
diff --git a/debian/daligner-doc/LAcheck.1.md b/debian/daligner-doc/LAcheck.1.md
index 3c4970a..6525fa7 100644
--- a/debian/daligner-doc/LAcheck.1.md
+++ b/debian/daligner-doc/LAcheck.1.md
@@ -4,7 +4,7 @@
 
 # NAME
 
-LAcheck – verify structural integrity of .las files
+LAcheck - verify structural integrity of .las files
 
 # SYNOPSIS
 
diff --git a/debian/daligner-doc/LAmerge.1.md b/debian/daligner-doc/LAmerge.1.md
index 6ad2de5..7a38d4b 100644
--- a/debian/daligner-doc/LAmerge.1.md
+++ b/debian/daligner-doc/LAmerge.1.md
@@ -4,11 +4,11 @@
 
 # NAME
 
-LAmerge – merge .las files into a single sorted file
+LAmerge - merge .las files into a single sorted file
 
 # SYNOPSIS
 
-**LAmerge** [**-v**] *merge:las* *parts:las* ...
+**LAmerge** [**-v**] *merge:las* *parts:las* `...`
 
 # DESCRIPTION
 
diff --git a/debian/daligner-doc/LAshow.1.md b/debian/daligner-doc/LAshow.1.md
index 141c508..f9c0c21 100644
--- a/debian/daligner-doc/LAshow.1.md
+++ b/debian/daligner-doc/LAshow.1.md
@@ -4,7 +4,7 @@
 
 # NAME
 
-LAshow – display local alignments from .las files
+LAshow - display local alignments from .las files
 
 # SYNOPSIS
 
diff --git a/debian/daligner-doc/LAsort.1.md b/debian/daligner-doc/LAsort.1.md
index d4443ec..2d8ee58 100644
--- a/debian/daligner-doc/LAsort.1.md
+++ b/debian/daligner-doc/LAsort.1.md
@@ -4,7 +4,7 @@
 
 # NAME
 
-LAsort – sort .las alignment files
+LAsort - sort .las alignment files
 
 # SYNOPSIS
 
diff --git a/debian/daligner-doc/LAsplit.1.md b/debian/daligner-doc/LAsplit.1.md
index 723ec63..3452d50 100644
--- a/debian/daligner-doc/LAsplit.1.md
+++ b/debian/daligner-doc/LAsplit.1.md
@@ -4,7 +4,7 @@
 
 # NAME
 
-LAsplit – divide an .las alignment file
+LAsplit - divide an .las alignment file
 
 # SYNOPSIS
 
diff --git a/debian/daligner-doc/daligner.1.md b/debian/daligner-doc/daligner.1.md
index aeb5dcb..acb4b22 100644
--- a/debian/daligner-doc/daligner.1.md
+++ b/debian/daligner-doc/daligner.1.md
@@ -4,7 +4,7 @@
 
 # NAME
 
-daligner
+daligner - long read aligner
 
 # SYNOPSIS
 

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