[med-svn] [qualimap] 01/01: Follow the hint by Emmanuel https://lists.debian.org/debian-java/2015/12/msg00005.html

[Andreas Tille]

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tille pushed a commit to branch master
in repository qualimap.

commit f9fa9ea6eccce8b9332ab433d2ca6fa1b64777cc
Author: Andreas Tille <tille at debian.org>
Date:   Wed Dec 2 15:30:50 2015 +0100

    Follow the hint by Emmanuel https://lists.debian.org/debian-java/2015/12/msg00005.html
---
 debian/patches/adapt_pom.xml | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/debian/patches/adapt_pom.xml b/debian/patches/adapt_pom.xml
index 92e8017..3c98c54 100644
--- a/debian/patches/adapt_pom.xml
+++ b/debian/patches/adapt_pom.xml
@@ -8,17 +8,19 @@ Description: Due to missing Maven support in picard-tools we need to
 
 --- a/pom.xml
 +++ b/pom.xml
-@@ -60,12 +60,14 @@
+@@ -60,12 +60,15 @@
         		<groupId>net.sf.picard</groupId>
          	<artifactId>picard</artifactId>
             	<version>1.70</version>
++                <scope>system</scope>
 +                <systemPath>/usr/share/java/picard.jar</systemPath>
         	</dependency>
          <dependency>
  			<groupId>net.sf.samtools</groupId>
              <artifactId>samtools</artifactId>
              <version>1.70</version>
-             <scope>compile</scope>
+-            <scope>compile</scope>
++            <scope>system</scope>
 +            <systemPath>/usr/share/java/sam.jar</systemPath>
          </dependency>
         	<dependency>

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