[med-svn] r20738 - in trunk/packages/rnahybrid/trunk/debian: . patches

[Andreas Tille]

Author: tille
Date: 2015-12-11 13:46:04 +0000 (Fri, 11 Dec 2015)
New Revision: 20738

Modified:
   trunk/packages/rnahybrid/trunk/debian/changelog
   trunk/packages/rnahybrid/trunk/debian/control
   trunk/packages/rnahybrid/trunk/debian/patches/fixmanpage.patch
   trunk/packages/rnahybrid/trunk/debian/patches/hardening.patch
   trunk/packages/rnahybrid/trunk/debian/rules
Log:
By using autoreconf hardening options are really propagated


Modified: trunk/packages/rnahybrid/trunk/debian/changelog
===================================================================
--- trunk/packages/rnahybrid/trunk/debian/changelog	2015-12-11 13:43:26 UTC (rev 20737)
+++ trunk/packages/rnahybrid/trunk/debian/changelog	2015-12-11 13:46:04 UTC (rev 20738)
@@ -2,6 +2,11 @@
 
   * New upstream version
   * cme fix dpkg-control
+  * DEP5 fix
+  * Check if file exists before opening
+    Closes: #715598, #715599
+  * Propagate hardening options
+  * Fix manpage syntax
 
  -- Andreas Tille <tille at debian.org>  Fri, 11 Dec 2015 13:36:53 +0100
 

Modified: trunk/packages/rnahybrid/trunk/debian/control
===================================================================
--- trunk/packages/rnahybrid/trunk/debian/control	2015-12-11 13:43:26 UTC (rev 20737)
+++ trunk/packages/rnahybrid/trunk/debian/control	2015-12-11 13:46:04 UTC (rev 20738)
@@ -5,7 +5,7 @@
 Section: science
 Priority: optional
 Build-Depends: debhelper (>= 9),
-               autotools-dev,
+               dh-autoreconf,
                libg2-dev
 Standards-Version: 3.9.6
 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/rnahybrid/trunk/

Modified: trunk/packages/rnahybrid/trunk/debian/patches/fixmanpage.patch
===================================================================
--- trunk/packages/rnahybrid/trunk/debian/patches/fixmanpage.patch	2015-12-11 13:43:26 UTC (rev 20737)
+++ trunk/packages/rnahybrid/trunk/debian/patches/fixmanpage.patch	2015-12-11 13:46:04 UTC (rev 20738)
@@ -1,3 +1,7 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Fri, 11 Dec 2015 13:36:53 +0100
+Description: Fix manpage syntax
+
 --- a/man/RNAcalibrate.1
 +++ b/man/RNAcalibrate.1
 @@ -1,5 +1,4 @@

Modified: trunk/packages/rnahybrid/trunk/debian/patches/hardening.patch
===================================================================
--- trunk/packages/rnahybrid/trunk/debian/patches/hardening.patch	2015-12-11 13:43:26 UTC (rev 20737)
+++ trunk/packages/rnahybrid/trunk/debian/patches/hardening.patch	2015-12-11 13:46:04 UTC (rev 20738)
@@ -1,3 +1,7 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Fri, 11 Dec 2015 13:36:53 +0100
+Description: Propagate hardening options
+
 --- a/src/Makefile.am
 +++ b/src/Makefile.am
 @@ -60,3 +60,6 @@ RNAeffective_SOURCES = \

Modified: trunk/packages/rnahybrid/trunk/debian/rules
===================================================================
--- trunk/packages/rnahybrid/trunk/debian/rules	2015-12-11 13:43:26 UTC (rev 20737)
+++ trunk/packages/rnahybrid/trunk/debian/rules	2015-12-11 13:46:04 UTC (rev 20738)
@@ -2,16 +2,8 @@
 # -*- makefile -*-
 
 %:
-	dh $@ --with autotools_dev
+	dh $@ -with autoreconf
 
-override_dh_auto_configure:
-	dh_auto_configure -- --host=$(DEB_HOST_GNU_TYPE) \
-			    --build=$(DEB_BUILD_GNU_TYPE) \
-			    --prefix=/usr \
-			    --mandir=\$${prefix}/share/man \
-			    CFLAGS="$(CFLAGS)" \
-			    LDFLAGS="-Wl,-z,defs"
-
 override_dh_auto_test:
 	src/RNAhybrid -s 3utr_worm -t examples/cel-hbl-1.fasta -q examples/cel-let-7.fasta
 	src/RNAcalibrate -d examples/3UTR_worm.freq -k 50 -l 50,30 -q examples/cel-let-7.fasta