[med-svn] [reapr] 04/05: make installation more in line with the original approach

[Sascha Steinbiss]

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sascha-guest pushed a commit to branch master
in repository reapr.

commit 8a014aa92c6910d4b0e36bb3d42044aee57cae02
Author: Sascha Steinbiss <sascha at steinbiss.name>
Date:   Sun Dec 13 18:42:18 2015 +0000

    make installation more in line with the original approach
---
 debian/links | 7 +++++++
 debian/rules | 9 +++++----
 2 files changed, 12 insertions(+), 4 deletions(-)

diff --git a/debian/links b/debian/links
new file mode 100644
index 0000000..7556858
--- /dev/null
+++ b/debian/links
@@ -0,0 +1,7 @@
+/usr/lib/reapr/reapr.pl /usr/bin/reapr
+/usr/bin/findknownsnps /usr/lib/reapr/findknownsnps
+/usr/bin/tabix /usr/lib/reapr/tabix
+/usr/bin/bgzip /usr/lib/reapr/bgzip
+/usr/bin/smalt /usr/lib/reapr/smalt
+/usr/bin/samtools /usr/lib/reapr/samtools
+/usr/bin/bamtools /usr/lib/reapr/bamtools
diff --git a/debian/rules b/debian/rules
index 25348b1..fe1a719 100755
--- a/debian/rules
+++ b/debian/rules
@@ -9,7 +9,8 @@ override_dh_auto_build:
 	cd src && $(MAKE)
 
 override_dh_auto_install:
-	mkdir -p debian/reapr/usr/lib
-	find src -name 'task*' -and -executable -exec cp {} debian/reapr/usr/lib \;
-	mkdir -p debian/reapr/usr/bin
-	cp src/reapr.pl debian/reapr/usr/bin/reapr
\ No newline at end of file
+	mkdir -p debian/reapr/usr/lib/reapr
+	cp src/reapr.pl debian/reapr/usr/lib/reapr/reapr.pl
+	find src -name 'task*' -and -executable -exec \
+	  cp {} debian/reapr/usr/lib/reapr \;
+	dh_auto_install --
\ No newline at end of file

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