[med-svn] r20827 - in trunk/packages/autodocksuite/trunk/debian: . patches

[Andreas Tille]

Author: tille
Date: 2015-12-19 16:56:21 +0000 (Sat, 19 Dec 2015)
New Revision: 20827

Added:
   trunk/packages/autodocksuite/trunk/debian/patches/csh2bash.patch
Modified:
   trunk/packages/autodocksuite/trunk/debian/changelog
   trunk/packages/autodocksuite/trunk/debian/control
   trunk/packages/autodocksuite/trunk/debian/patches/series
Log:
cme fix dpkg-control, avoid csh Build-Depends


Modified: trunk/packages/autodocksuite/trunk/debian/changelog
===================================================================
--- trunk/packages/autodocksuite/trunk/debian/changelog	2015-12-19 08:23:43 UTC (rev 20826)
+++ trunk/packages/autodocksuite/trunk/debian/changelog	2015-12-19 16:56:21 UTC (rev 20827)
@@ -1,3 +1,10 @@
+autodocksuite (4.2.6-3) UNRELEASED; urgency=medium
+
+  * cme fix dpkg-control
+  * avoid csh Build-Depends
+
+ -- Andreas Tille <tille at debian.org>  Sat, 19 Dec 2015 12:11:25 +0100
+
 autodocksuite (4.2.6-2) unstable; urgency=medium
 
   * Fix autopkgtest dependencies (thanks for the patch to Lucas Kanashiro

Modified: trunk/packages/autodocksuite/trunk/debian/control
===================================================================
--- trunk/packages/autodocksuite/trunk/debian/control	2015-12-19 08:23:43 UTC (rev 20826)
+++ trunk/packages/autodocksuite/trunk/debian/control	2015-12-19 16:56:21 UTC (rev 20827)
@@ -5,14 +5,13 @@
            Andreas Tille <tille at debian.org>,
            Thorsten Alteholz <debian at alteholz.de>
 Section: science
-Priority: optional
 Testsuite: autopkgtest
+Priority: optional
 Build-Depends: debhelper (>= 9),
                automake,
-               csh|c-shell,
                python,
                autotools-dev
-Standards-Version: 3.9.5
+Standards-Version: 3.9.6
 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/autodocksuite/trunk/
 Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/autodocksuite/trunk/
 Homepage: http://autodock.scripps.edu/

Added: trunk/packages/autodocksuite/trunk/debian/patches/csh2bash.patch
===================================================================
--- trunk/packages/autodocksuite/trunk/debian/patches/csh2bash.patch	                        (rev 0)
+++ trunk/packages/autodocksuite/trunk/debian/patches/csh2bash.patch	2015-12-19 16:56:21 UTC (rev 20827)
@@ -0,0 +1,34 @@
+Author: Andreas Tille <tille at debian.org>
+Last-Update: Sat, 19 Dec 2015 12:11:25 +0100
+Description: avoid csh Build-Depends
+
+--- a/autodock/paramdat2h.csh
++++ b/autodock/paramdat2h.csh
+@@ -1,4 +1,4 @@
+-#!/bin/csh -f
++#!/bin/sh -e
+ #
+ # $Id: paramdat2h.csh,v 1.10 2011/03/08 04:18:37 mp Exp $
+ # 
+--- a/autodock/Makefile.am
++++ b/autodock/Makefile.am
+@@ -677,7 +677,7 @@ read_parameter_library.o : default_param
+ 
+ default_parameters.h : AD4_parameters.dat AD4.1_bound.dat paramdat2h.csh
+ 	rm -f $@
+-	csh $(srcdir)/paramdat2h.csh $(srcdir)/AD4_parameters.dat $(srcdir)/AD4.1_bound.dat > $@
++	sh $(srcdir)/paramdat2h.csh $(srcdir)/AD4_parameters.dat $(srcdir)/AD4.1_bound.dat > $@
+ 
+ #coliny.o : coliny.h
+ #	$(CXX) $(CPPFLAGS) $(CXXFLAGS) $(ACRO_INCLUDES) -c coliny.cc -o coliny.o
+--- a/autogrid/Makefile.am
++++ b/autogrid/Makefile.am
+@@ -160,7 +160,7 @@ main.o : $(srcdir)/../autodock/autocomm.
+ 
+ default_parameters.h : $(srcdir)/../autodock/paramdat2h.csh  $(srcdir)/../autodock/AD4_parameters.dat $(srcdir)/../autodock/AD4.1_bound.dat
+ 	rm -f $@
+-	csh $(srcdir)/../autodock/paramdat2h.csh $(srcdir)/../autodock/AD4_parameters.dat  $(srcdir)/../autodock/AD4.1_bound.dat > $@
++	sh $(srcdir)/../autodock/paramdat2h.csh $(srcdir)/../autodock/AD4_parameters.dat  $(srcdir)/../autodock/AD4.1_bound.dat > $@
+ 	sh $(srcdir)/copyfilesfromAD
+ 
+ # 2007-04-30 MP & GMM: this line is necessary to be able to compile read_parameter_library.o

Modified: trunk/packages/autodocksuite/trunk/debian/patches/series
===================================================================
--- trunk/packages/autodocksuite/trunk/debian/patches/series	2015-12-19 08:23:43 UTC (rev 20826)
+++ trunk/packages/autodocksuite/trunk/debian/patches/series	2015-12-19 16:56:21 UTC (rev 20827)
@@ -1 +1,2 @@
 create_fake_autoreconf_files.patch
+csh2bash.patch