[med-svn] [mrbayes] annotated tag upstream/3.2.5+dfsg created (now bb9c4d0)

[Andreas Tille]

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tille pushed a change to annotated tag upstream/3.2.5+dfsg
in repository mrbayes.

        at  bb9c4d0   (tag)
   tagging  91b3892399fd2ee54499de633258272c2848a6a8 (commit)
 tagged by  Andreas Tille
        on  Wed Dec 30 21:51:14 2015 +0100

- Log -----------------------------------------------------------------
Upstream version 3.2.5+dfsg

Andreas Tille (41):
      Added myself to uploaders, some package polishing, will try to push the package foreward
      README.Debian which is helpful for users instead of packagers
      Added watch file
      Machine readable copyright
      Some polishing, dropped useless libncurses dependency, provide better docs for MPI package
      Avoid linking against (most of) unneeded libraries
      Removed bash dependency where I do not see any need for; added openmpi-common to mrbayes-mpi which seems to be a minimum requirement - however, the executable fails to start anyway and needs further investigation
      For mb-mpi we need a wrapper executing orterun to call the executable
      Finally uploaded to unstable
      Use mpi-default-bin instead of explicitely specifying openmpi
      New upstream version for Debian; all pathces applied upstream
      Wait for upload of libhmsbeagle (closing #656609)
      Upload to unstable
      Create new tarball including source for PDF; remove PDF without source from upstream tarball
      Add "+dfsg" to upstream tarball
      dversionmangle for renamed upstream target (+dfsg)
      Added doc package and uploaded to unstable
      Fixed DEP5 issues and verified using `cme fix dpkg-copyright`
      Vcs fields, standards-version; upload to unstable
      Add publication of the day
      Incorporate as-needed patch
      Debhelper 9 to enable hardening; use xz compression because size of -dbg package increased drastically in this build (but even xz helped that much); upload to unstable
      Adapt get-orig-source to new SVN location to fetch sources of documentation files
      Fist part of changing file permissions of debian/rules
      Reinject d/rules with executable bit set
      New upstream version
      cme fix dpkg-control
      Make sure we are properly linking against all libs
      deactivate dh_auto_install since it tries to move files to /usr/local/bin
      mrbayes-dbg: s/Conflicts/Breaks/
      Build-Depends: libhmsbeagle-dev (<< 2.1-1) | libhmsbeagle-dev (>= 2.1-2) since libhmsbeagle-dev (= 2.1-1) is lacking the unversioned header dir
      Mass commit changes for staden done when traveling home from MiniDebConf Paris
      Commit as uploaded
      New upstream version
      Fix get-orig-source target
      Adapt get-orig-source script, cme fix dpkg-control
      New upstream version
      Refresh patches
      Upload to unstable
      Avoid hardcoded shared library dependency
      Imported Upstream version 3.2.5+dfsg

Charles Plessy (1):
      Corrected a typo in mrbayes-doc's description.

Dominique Belhachemi (2):
      Using debhelper, added mrbayes-mpi
      debian/rules clean-up

James McCoy (1):
      Move debian/upstream to debian/upstream/metadata

Steffen Moeller (4):
      Initial upload of Ubuntu's MrBayes with some
      Further updates to get it finally compiled.
      Added debug packages, released only to our PPA.
      Fixes dependencies.

Tim Booth (3):
      My first crack at building new MrBayes.  Note there is a new build system so
      Improved build for MrBayes 3.2.0 with Beagle
      Added pre-dependency required to keep Ubuntu happy

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