[med-svn] [python-ruffus] 01/01: Add some autopkgtest suite (not finished)

[Andreas Tille]

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tille pushed a commit to branch master
in repository python-ruffus.

commit 89ad51fe5ba816b246714ebf1b2d2d194a1a14c3
Author: Andreas Tille <tille at debian.org>
Date:   Mon Feb 2 12:25:40 2015 +0100

    Add some autopkgtest suite (not finished)
---
 debian/control             |  4 +++-
 debian/rules               |  2 +-
 debian/tests/control       |  3 +++
 debian/tests/run-unit-test | 24 ++++++++++++++++++++++++
 4 files changed, 31 insertions(+), 2 deletions(-)

diff --git a/debian/control b/debian/control
index 2c6db85..1ef2ec8 100644
--- a/debian/control
+++ b/debian/control
@@ -9,7 +9,8 @@ Build-Depends: debhelper (>= 9),
                python-setuptools,
                python3-all,
                python3-setuptools,
-               python-sphinx
+               python-sphinx,
+               python-drmaa
 Standards-Version: 3.9.6
 Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/python-ruffus.git
 Vcs-Git: git://anonscm.debian.org/debian-med/python-ruffus.git
@@ -20,6 +21,7 @@ Architecture: all
 Depends: ${shlibs:Depends},
          ${misc:Depends},
          ${python:Depends}
+Recommends: python-drmaa
 Description: Python computation pipeline library widely used in bioinformatics
  Ruffus is designed to allow scientific and other analyses to be automated
  with the minimum of fuss and the least effort.
diff --git a/debian/rules b/debian/rules
index ba4540a..a733b0c 100755
--- a/debian/rules
+++ b/debian/rules
@@ -23,7 +23,7 @@ override_dh_auto_test:
 ### No idea why this fails :-(
 #	LC_ALL=C.UTF-8 dh_auto_test -- --test --system=custom --test-args='set -e; cd ruffus/test; for tst in test*.py ; do {interpreter} $$tst ; done'
 ### Try find ...
-	LC_ALL=C.UTF-8 dh_auto_test -- --test --system=custom --test-args='set -e; cd ruffus/test; find . -type f -name "test*.py" -exec {interpreter} \{\} \; ; done'
+#	LC_ALL=C.UTF-8 dh_auto_test -- --test --system=custom --test-args='set -e; cd ruffus/test; find . -type f -name "test*.py" -exec {interpreter} \{\} \; ; done'
 
 override_dh_auto_clean:
 	dh_auto_clean
diff --git a/debian/tests/control b/debian/tests/control
new file mode 100644
index 0000000..1160776
--- /dev/null
+++ b/debian/tests/control
@@ -0,0 +1,3 @@
+Tests: run-unit-test
+Depends: @, python-drmaa
+Restrictions: allow-stderr
diff --git a/debian/tests/run-unit-test b/debian/tests/run-unit-test
new file mode 100644
index 0000000..0dd3030
--- /dev/null
+++ b/debian/tests/run-unit-test
@@ -0,0 +1,24 @@
+#!/bin/sh -e
+
+pkg=python-ruffus
+if [ "$ADTTMP" = "" ] ; then
+  ADTTMP=`mktemp -d /tmp/${pkg}-test.XXXXXX`
+fi
+cd $ADTTMP
+cp -a /usr/share/doc/python-ruffus-doc/test/* .
+find . -type f -name "*.gz" -exec gunzip \{\} \;
+chmod +x [a-z]*.py
+exportLC_ALL=C.UTF-8
+# prepare data used in tests:
+python test_filesre_split_and_combine.py --start_again
+for pi in $(pyversions -i) $(py3versions -i); do
+  for tst in test*.py ; do
+    echo "------------> $tst <-----------"
+    if [ "$tst" = "test_N_x_M_and_collate.py" ] ; then
+      ${pi} test_N_x_M_and_collate.py --debug
+    else
+      ${pi} $tst
+    fi
+  done
+done
+# rm -f $ADTTMP/*

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