[med-svn] [rsem] 01/01: Add description to get some sensible content on the tasks page
Andreas Tille
tille at debian.org
Tue Feb 3 13:10:58 UTC 2015
This is an automated email from the git hooks/post-receive script.
tille pushed a commit to branch master
in repository rsem.
commit af9d30efdfa0a26fcf0deabf0fbe96defaea8eb0
Author: Andreas Tille <tille at debian.org>
Date: Tue Feb 3 14:10:32 2015 +0100
Add description to get some sensible content on the tasks page
---
debian/control | 19 +++++++++++++++++--
1 file changed, 17 insertions(+), 2 deletions(-)
diff --git a/debian/control b/debian/control
index 40940d2..a70ec05 100644
--- a/debian/control
+++ b/debian/control
@@ -12,5 +12,20 @@ Homepage: http://deweylab.biostat.wisc.edu/rsem/
Package: rsem
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}, r-base-core
-Description: <short_description>
- <long_description>
+Description: RNA-Seq by Expectation-Maximization
+ RSEM is a software package for estimating gene and isoform expression
+ levels from RNA-Seq data. The RSEM package provides an user-friendly
+ interface, supports threads for parallel computation of the EM
+ algorithm, single-end and paired-end read data, quality scores,
+ variable-length reads and RSPD estimation. In addition, it provides
+ posterior mean and 95% credibility interval estimates for expression
+ levels. For visualization, It can generate BAM and Wiggle files in both
+ transcript-coordinate and genomic-coordinate. Genomic-coordinate files
+ can be visualized by both UCSC Genome browser and Broad Institute’s
+ Integrative Genomics Viewer (IGV). Transcript-coordinate files can be
+ visualized by IGV. RSEM also has its own scripts to generate transcript
+ read depth plots in pdf format. The unique feature of RSEM is, the read
+ depth plots can be stacked, with read depth contributed to unique reads
+ shown in black and contributed to multi-reads shown in red. In addition,
+ models learned from data can also be visualized. Last but not least,
+ RSEM contains a simulator.
--
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